Phage RBP Database

Genbank accession

AHK11420.1 [GenBank]

Protein name

hypothetical protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

Protein sequence

MAIPVAIETEVYQGKSLRSANFGMEFSAKLARTLSSTLYDYKIEACIREYSTNVTDSHNDSGKRGVAGKIHLPTQMEPWFEAEDFGLGMTEDTIYSIFTVYGKSTKEEDNSTNGCLGYGSKVGFSVGDQFTITSVKDGAKSIVVCYKDRTGLPTADTKSITTTTESNGTKIRVPIDTKDISKWHLNGARVLGAFETQHEVNTFGAYEDEYTATRNLCTRVREETSVYLDKRSVGHFNHRDTRFVLMGDVLYSIPSWGDLVRCKSLSTISDDLTSDGVYITHFGIGECDFAPSRESLSLDQQTFNKVSKRITCDIIKYYRNLMKEVGSSETASWYLFYKKFRGTSVWDALKDYPLPFTGGYALKYTNTSSYTRSGYFDGYKIKFLTGKMTNVSGIVPTNHRSGGVMFSNSVENLHQERISRMDNIILVYSEKEKGLKDKKNTLFNIQDVFPDSDTILYCPTEDTLSFAKTWFGVSDEMVLCGDSYVKTKPKTSSSKTKRGGYGITDDRFTVANVIDKTGTNFTRVDLTDADLFYVSGDSGMNVKCLDGEVVPINFGSHHFNKLENLGVTKVIITNKNNEAKVKRYGVKDLGSHISAAVADNRKCLVKTKLSRQYRNNLNFSTKVDTVLPLLKATKKFTKYMDKIESSEVASTLLSISDFRVTKIPTYTKMVDKVDKLQNNVRLEIESVKSKLPLWDKVHGDDFKYYLKLEKFIK

Physico‐chemical properties

protein length:	713 AA
molecular weight:	80240,94310 Da
isoelectric point:	8,73213
aromaticity:	0,10519
hydropathy:	-0,43899

Domain architecture

AHK11420.1

1 713 aa

ATT 7–190 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR036890
ATT

IPR036890

IPR036890
ATT

IPR036890

IPR036890
ATT

IPR036890

AHK11420.1

1713 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR036890	ATT	IPR036890	7	190	Merged direct domain	Histidine kinase/HSP90-like ATPase superfamily	N-terminal	Low	Positional only	2 proteins / 2 hits
IPR036890	ATT	IPR036890	7	175	Merged direct domain	Histidine kinase/HSP90-like ATPase superfamily	N-terminal	Low	Positional only	2 proteins / 2 hits
IPR036890	ATT	IPR036890	40	179	Merged direct domain	Histidine kinase/HSP90-like ATPase superfamily	N-terminal	Low	Positional only	2 proteins / 2 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

AHK11420.1

1 713 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	279	279	0,0464
Central domain	280	478	200	0,2992
C-terminal	479	713	234	0,9503

Note: Constraints were applied during segmentation.
Fixed 286 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Shewanella sp. phage 1/40 [NCBI] · taxon 1458860

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Shewanella sp. [NCBI] · taxon 50422

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Alteromonadales

Host

Shewanella sp. 40 [NCBI] · taxon 1386773

Bacteria Proteobacteria Gammaproteobacteria Alteromonadales Shewanellaceae Shewanella

Genbank protein accession

AHK11420.1 [NCBI]

Genbank nucleotide accession

KJ018211 [NCBI]

CDS location

range 5668 -> 7809
strand -

CDS

ATGGCAATTCCAGTAGCAATAGAAACAGAAGTATATCAAGGTAAATCCTTACGTTCAGCTAATTTTGGCATGGAGTTCTCTGCTAAGTTGGCACGTACATTATCATCTACATTATATGATTATAAAATTGAAGCTTGTATCCGTGAGTATTCTACCAATGTAACTGACAGTCATAATGACTCAGGTAAGCGTGGTGTAGCGGGAAAGATTCACTTACCTACTCAAATGGAACCTTGGTTCGAAGCAGAAGATTTTGGTTTAGGTATGACTGAAGATACTATCTACTCTATTTTTACTGTTTATGGTAAATCCACTAAAGAAGAAGATAATAGCACGAATGGTTGTCTAGGGTACGGTTCTAAAGTTGGGTTCAGTGTAGGTGACCAGTTTACTATCACCTCTGTAAAAGATGGAGCAAAATCTATAGTAGTCTGCTACAAAGACCGTACAGGACTTCCTACTGCTGATACTAAATCTATCACCACCACTACTGAATCTAATGGAACTAAAATACGTGTACCTATAGATACTAAAGATATTAGCAAATGGCATCTGAATGGTGCCCGTGTACTGGGTGCTTTTGAAACACAACACGAAGTTAACACCTTTGGTGCTTATGAAGATGAATACACCGCAACTAGAAATCTATGTACCCGTGTACGTGAGGAAACCAGTGTGTATTTGGATAAAAGGAGTGTAGGTCACTTCAACCACAGGGACACAAGATTTGTATTAATGGGTGACGTACTGTACTCTATCCCTTCTTGGGGAGATTTAGTGAGATGTAAGTCATTAAGCACTATCTCAGATGACCTAACTTCAGATGGAGTATATATCACACACTTTGGAATAGGTGAGTGTGACTTTGCCCCCAGTAGAGAGTCTTTGAGTTTAGACCAACAGACTTTCAACAAGGTAAGTAAACGTATTACCTGTGATATTATAAAATATTATCGGAACCTTATGAAAGAAGTAGGCAGCAGCGAAACAGCTAGTTGGTACCTATTCTATAAGAAATTTAGAGGTACTTCTGTGTGGGATGCTCTGAAGGATTACCCCTTACCTTTTACTGGAGGTTATGCACTCAAGTACACTAATACCTCAAGTTATACACGTTCTGGGTATTTTGATGGATACAAGATTAAGTTCCTTACTGGTAAAATGACTAATGTTAGTGGTATTGTTCCAACTAATCACCGTAGTGGTGGCGTCATGTTTAGTAACTCTGTGGAGAACTTACATCAAGAACGTATATCGCGCATGGATAATATTATTTTAGTCTATAGTGAGAAGGAAAAAGGATTAAAAGATAAGAAGAACACTTTATTTAACATACAAGATGTTTTCCCTGATAGTGATACTATTTTATACTGCCCAACAGAAGATACCCTATCCTTTGCTAAAACTTGGTTTGGTGTTTCCGATGAAATGGTTTTATGTGGTGATTCTTATGTGAAAACTAAACCTAAAACCTCTAGTAGTAAAACTAAACGAGGTGGTTATGGTATTACAGATGATAGGTTCACTGTAGCCAATGTTATAGATAAGACTGGTACCAATTTTACAAGGGTTGATTTAACTGATGCAGATTTATTTTATGTAAGTGGTGACAGTGGTATGAATGTTAAGTGTCTTGACGGGGAGGTAGTCCCTATTAACTTCGGTTCACATCATTTTAATAAATTAGAAAATCTTGGTGTTACTAAGGTTATCATTACTAATAAGAATAATGAAGCCAAGGTAAAAAGATATGGTGTGAAAGACTTAGGTTCTCATATAAGTGCTGCAGTTGCTGATAATAGGAAGTGTTTAGTGAAAACAAAACTCAGTAGACAGTACCGCAATAATTTAAACTTCAGCACTAAAGTTGACACAGTACTACCTTTACTTAAAGCTACTAAGAAGTTCACCAAGTACATGGACAAAATAGAAAGTAGTGAGGTGGCTTCTACTTTGCTCTCGATATCTGACTTCAGAGTAACTAAAATCCCAACTTATACTAAGATGGTTGACAAAGTGGACAAATTGCAGAATAATGTGAGACTAGAGATTGAAAGTGTTAAGAGTAAGTTACCACTGTGGGACAAGGTACACGGAGATGATTTTAAATATTACCTCAAGCTAGAAAAGTTTATCAAATAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)