Phage RBP Database

Genbank accession

AIX13003.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 0,68

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 1,00

Protein sequence

MADAPKTTITYPLDGSNKDFPIPFEYLARKFVQVTLVGTDRKPLVLNIDFRFTQRTIITTTKTWGPSDGYSLIEIRRYTSATERLVDFSDGSILRAYDLNTSQVQSLHIAEEGRDIATDTIGVNNDGDLDARGRKIVNVADGTGDFDAVNLRQQKVWAGSALNQADRSKAEADRSQAQADRSTQQANASAQSAVNSETSNKASFAQADRSKNEADRATAQANEATRQAGLATTNGQAQLGLAQAEVRKATEQVGLATTQANRSTQEADRATAQANASAGSATASKGSADASAASAGQSAASAKVSKDNADKVLAGFASFGSMPLGSLVDLPRHNDAIIASMTSQGFVQCAGQSLDAEAHKELIAFLGTTVAPNGIGRYRKMSGDLSPGAAENPGNLVAGAIPAHAHTIPEHGHAASSSVAGWHAHAASAWTDAQGQHSHTIQSFNSGGVVGNSGYVATAGRAQVQYQVGGVDAAGNHAHNVGVSVAAEGNHQHAIYIGNQAAFSTTNAGSGATVETNRLMVWTWIKAKAPAGATQLNALLDRIAALEAKL

Physico‐chemical properties

protein length:	550 AA
molecular weight:	57218,15550 Da
isoelectric point:	6,31489
aromaticity:	0,05273
hydropathy:	-0,35564

Domain architecture

AIX13003.1

1 550 aa

ATT 1–131 · STR 132–153 · STR 343–447 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR005604
ATT

IPR005604 Coil Coil SSF88874

IPR011049
STR

IPR011049

AIX13003.1

1550 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0264
STR

DC_0264

AIX13003.1

1550 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR005604	ATT	DC_0240	1	131	InterPro cluster	Bacteriophage T7 tail fibre protein-like, N-terminal domain	Central	Medium	Text match	1326 proteins / 1328 hits
IPR011049	STR	IPR011049	116	153	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
Coil	Unmapped	-	165	185	Coils	Coil	-	-	-	-
Coil	Unmapped	-	207	227	Coils	Coil	-	-	-	-
SSF88874	STR	SSF88874	343	447	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

AIX13003.1

1 550 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	318	318	0,9935
Central domain	319	517	200	0,0020
C-terminal	518	550	32	0,9985

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Pseudomonas phage Pf-10 [NCBI] · taxon 1562076

Uroviricota Caudoviricetes Autographivirales Studiervirinae Pifdecavirus

Host

Pseudomonas putida [NCBI] · taxon 303

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales

No CDS data available.

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)