Phage RBP Database

Genbank accession

WLW38444.1 [GenBank]

Protein name

tail collar fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence RBPdetect

Probability 0,88

TF

Evidence RBPdetect2

Probability 0,91

Seq2Symm

C3 confidence 0,953

C3	0,953
C1	0,069
I	0,043

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MADIVYRLEKGSPLTNQEMDDNLRELDQNRVKTSLLGATVGDGIPVMEDGVIKEENLPPISSGPPVGSVSWWPKRESISNGQLPADGQAVSRDTFPDLAQMVIDGNLPVVTEADWLADPLKRGSFTLGDGSTTIRLPDYNGRSLGSLGAIFLRGDGALSSGANGLIQRDALQNIKGSVRTTYGAIGGSEGALATLAGVTDGAPQYNTSAQGNRLDFDASRSARTATETRPLNVSGVWTIQAFTAVTNAGSIDIGALAADVTELQGDIEILGPKVDALGAAFETRATRLRVKSRNYATAGSNAPSTVTAARITFRPYDVAGKPVTLNTSALTLNNDTRQVGLNGRDTATAFPSPSVVHLFAVTNGTSVWTLASTNLPEVGPTPSAGSEGLPTHFCYLTTILHNTSGFLQCDTIGSKVVMIGNVTVATSITSGNRYSINMTGAYPYQFAKGWGGTFYSTLTAGVANAALTLFAEWEMGANHVSVTAYSAANSSAYSYLRSEFPAGQYIWVYAGLSGPSSSFLGRIFLDDYEIYNNCD

Physico‐chemical properties

protein length:	535 AA
molecular weight:	56365,14810 Da
isoelectric point:	4,94092
aromaticity:	0,08037
hydropathy:	-0,10972

Domain architecture

WLW38444.1

1 535 aa

ATT 59–155 · STR 156–240 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

SSF88874
STR

SSF88874

IPR037053
ATT

IPR037053

IPR037053
ATT

IPR037053

WLW38444.1

1535 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_2268
ATT

DC_2268 DC_2049

WLW38444.1

1535 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
SSF88874	STR	SSF88874	59	240	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR037053	ATT	IPR037053	64	144	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
IPR037053	ATT	IPR037053	65	155	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits

Proteins with similar domain architecture

Phage

Achromobacter phage JWT [NCBI] · taxon 3070119

Uroviricota Caudoviricetes Steinhofvirus Achromobacter phage JWT

Host

Achromobacter xylosoxidans [NCBI] · taxon 85698

Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter xylosoxidans

Genbank protein accession

WLW38444.1 [NCBI]

Genbank nucleotide accession

OQ938574 [NCBI]

CDS location

range 16243 -> 17850
strand +

CDS

ATGGCTGATATCGTATACCGTTTGGAAAAAGGGTCTCCTCTCACCAATCAGGAGATGGATGACAACCTGCGTGAGCTCGATCAAAATCGAGTGAAAACGTCCTTACTCGGCGCAACGGTTGGTGACGGCATTCCCGTTATGGAAGACGGGGTCATCAAAGAAGAAAACCTACCTCCAATCTCTTCCGGCCCGCCTGTGGGCTCTGTCTCGTGGTGGCCGAAGCGCGAGAGCATATCCAATGGGCAATTGCCAGCAGATGGACAAGCTGTCTCCCGAGACACGTTTCCTGACTTGGCGCAAATGGTCATTGACGGCAATTTGCCCGTTGTTACGGAAGCGGACTGGCTAGCAGACCCGCTGAAGCGCGGATCGTTCACACTTGGTGACGGTTCTACCACGATCCGTCTGCCTGATTACAATGGCCGGTCCTTGGGGTCACTTGGTGCTATTTTCTTGCGCGGTGACGGTGCACTGTCGTCAGGGGCTAATGGCTTGATTCAGCGCGACGCTTTGCAAAATATCAAGGGCTCAGTGCGTACCACCTATGGAGCAATTGGCGGGTCTGAGGGAGCTCTTGCCACGTTAGCAGGTGTTACGGATGGTGCACCCCAATACAACACCAGCGCCCAAGGTAATCGTCTAGATTTTGATGCTTCACGCTCTGCACGCACAGCAACCGAAACACGTCCTTTGAATGTGTCTGGCGTTTGGACCATTCAAGCTTTCACAGCAGTGACTAACGCTGGCAGCATTGATATTGGAGCTTTGGCAGCGGATGTTACAGAGCTGCAAGGCGACATTGAAATTTTGGGGCCTAAGGTTGATGCCTTGGGTGCGGCGTTTGAAACTCGAGCTACACGCTTGCGAGTTAAGTCACGAAACTATGCTACTGCAGGGTCTAATGCTCCTAGCACGGTCACGGCTGCTCGAATCACATTTCGTCCGTATGATGTGGCAGGCAAGCCTGTTACGTTGAATACCTCCGCTCTTACGCTTAATAATGATACTCGTCAAGTTGGCCTAAATGGCCGTGACACTGCAACGGCCTTTCCTAGCCCGTCTGTTGTCCATTTATTTGCAGTTACCAATGGCACTTCTGTATGGACTTTGGCTTCGACTAATTTGCCTGAAGTAGGGCCAACACCGTCAGCTGGCTCTGAGGGCCTGCCCACGCACTTCTGCTACTTGACTACCATCTTGCACAATACTTCCGGATTCCTTCAGTGTGACACTATTGGATCAAAAGTAGTTATGATTGGCAACGTAACTGTTGCTACGTCCATAACTTCCGGGAACCGTTATAGCATTAATATGACGGGCGCCTACCCGTATCAATTTGCAAAAGGTTGGGGCGGGACGTTTTATTCAACTCTTACCGCAGGTGTAGCAAATGCGGCACTTACATTGTTCGCAGAATGGGAAATGGGAGCGAACCACGTATCTGTAACCGCGTACTCTGCAGCAAACTCTAGCGCGTACTCGTATTTGAGGTCCGAGTTCCCGGCTGGCCAGTACATATGGGTTTATGCTGGTTTGTCTGGCCCTAGCAGCAGTTTCCTTGGTCGTATTTTCCTAGACGATTATGAGATTTACAACAATTGTGACTGA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)