Protein

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Genbank accession
YP_004300996.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,61
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MAELKSSSTAGGSLVWTQTNLPVSPQDGKIFYKDMELVDSKNNQTIAGKKDFTTGATVPTPVLANDATNKSYVDGKDSTSVKSVRGTAPIRVTTGVNPTVSIDAATPTASGSMSAGDKAKLDNHPFNVVNKDGDTVNGNLATTGNFSAQGKITSTANAGIENMDDVYAQRMVLSGSQGYFQAGKKDRDVNDQKMVFSGWFGTPLSQYRISMATGIQPQVLQGGVNYDILHRGNMPTPEDIKAMAIYDRPTGDDCNNAILPGNYGIFANTANTPFGIGPSGSTLLVTRWGNGANSQIFFPYGSDRVFVRRQHISVWQPWFELYSTSNKQPVGGMGLGVGDAPNALTITGNVRDFNLAKINGTFTIEGSWANGVNNTANAEGHAGILQISQRSIDNLTVQKYTTWLTGQGVNHHREFTRIWINDTEGWNNWLPSGTWESVNTYRTGILRLNNQTNDDSVYPYVSYTKEKYRDTIAPGTYYTVGEISFRAGSSNRYDPHSGDQLSRILGMVTNTATAGEYDGSLFLASRLRRTDGTVADSSTLAINRDLGVEFTHAAKKVQINTGRVTADEFFQNTAQSSLANSSTRKDYVDAEVATKVSKAGDTMTGSLTLPTAKPLYFGAGNNTYLTRSGDDLFVAAIAGTTGKVVIEGKVNPQVRIGTSNYNIYHAGNKPTSTELGVVNIAGDVMTGNLIVDVGTTAEPQVGVRRSGRRLYMADNGVTVGLYNIIGGSFINTFMISRNINDGNITVGSDSNNTIIRGAGNLKHGTADIYTTSNKPSPADIGTLTTAQINAELAKQVSKTGDTMSGALTTTQVNATNNYAFVSSIAQTHGMYLGNTASDKRLILGGGNPTIGAVHIRPHGIGVETSQTIFNTDGTITNGATPTEPGHLTNKVYVDGQISQQVSKSGDTMTGQLLIQTANNAPIQLKSTTAGVVTPQYIVANDSTGAQRWYIGQASANSPDVLLYSTGNGTYLRLESNQVSFNKNPISTALQGTAAGSLVRRDFLESSLSIQTPNNAIKIPVANLNDYQTPGYYYQDSNANAVSGSNYPTPQAGALVVTKAAGVIQEYTIYGTGARYVRAFYTNVWSSWALVYDSTRPPGATAVGALPIAGGTLTGGYLQIRGSSNPMLELHQPGQAAAVMYLTPTGQFRLGSGNGAGGETNVRMTVEPNGNVYSAGSITSAGYMLEGGARVYSPNNPQPSLTPTQIGNALASMSYDAVGQYAMLLLYVDKGNWLVPGTVVPGSQLRYSTAEGKDPGGAPPGNWRLHGRTNQGGQWGGRNVSLWQRVS
Physico‐chemical
properties
protein length:1286 AA
molecular weight: 136685,20260 Da
isoelectric point:8,47529
aromaticity:0,08009
hydropathy:-0,34308

Domains

Domains [InterPro]
DC_1143
STR
26–329
DC_1143 DC_0466 cd19958
cd19958
STR
249–322
cd19958 G3DSA:6.20.80.10 DC_1924
DC_0466
STR
317–660
DC_0466 IPR048388
YP_004300996.1
1 1286
Architecture
STR
STR
ATT
STR
RBD
STR 26-660 | STR 709-922 | ATT 923-985 | STR 1020-1091 | RBD 1092-1286
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_004300996.1
1 1286
Domain Start End Length (AA) Confidence
N-terminal 1 499 499 0,3451
Central domain 500 698 200 0,2933
C-terminal 699 1286 587 0,7904
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-499
Central
500-698
C-terminal
699-1286

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage 65
[NCBI] 		2919549 Uroviricota > Caudoviricetes > Pantevenvirales > Emmerichvirinae > Ishigurovirus
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004300996.1 [NCBI]
Genbank nucleotide accession
NC_015251.1 [NCBI]
CDS location
range 127623 -> 131483
strand +
CDS
ATGGCAGAATTGAAGAGTTCATCTACTGCTGGGGGTAGTCTTGTTTGGACACAAACAAACTTACCGGTATCCCCTCAAGATGGGAAAATATTCTACAAGGATATGGAGTTGGTAGATAGCAAAAATAATCAGACTATCGCCGGAAAAAAAGATTTTACTACAGGGGCTACTGTTCCTACTCCTGTATTAGCTAATGACGCTACAAATAAATCATATGTGGATGGTAAGGATTCCACATCAGTTAAATCCGTTCGCGGAACCGCCCCTATTAGAGTAACTACAGGAGTTAACCCGACTGTATCTATTGATGCAGCAACCCCAACGGCTTCTGGTTCTATGAGCGCGGGTGATAAAGCTAAATTAGACAATCATCCATTTAACGTAGTTAATAAAGATGGAGATACAGTAAACGGTAATTTGGCTACTACCGGCAATTTCTCTGCACAAGGGAAGATTACCTCAACTGCTAACGCCGGTATTGAAAATATGGACGATGTATATGCACAACGCATGGTATTATCTGGTTCACAAGGATATTTTCAAGCTGGTAAAAAAGATAGAGATGTTAACGACCAAAAGATGGTATTTTCTGGCTGGTTTGGTACACCACTATCACAATATAGAATCAGTATGGCTACTGGGATTCAACCCCAAGTTCTTCAGGGCGGTGTAAACTATGATATTCTTCATCGTGGGAATATGCCAACTCCTGAAGATATTAAAGCAATGGCTATTTATGATCGCCCAACTGGTGATGATTGTAATAACGCAATATTACCCGGTAACTATGGTATCTTTGCTAATACAGCAAACACTCCTTTCGGGATAGGACCTAGCGGTTCTACTCTGCTTGTAACTCGTTGGGGAAATGGCGCTAACTCTCAGATATTCTTTCCATACGGATCGGATAGAGTGTTTGTTCGTCGTCAACATATTAGTGTTTGGCAGCCTTGGTTTGAGTTGTATTCAACTTCTAACAAGCAACCTGTTGGTGGTATGGGTCTTGGTGTTGGTGATGCACCGAACGCTCTGACAATCACAGGTAACGTTCGTGATTTCAACTTGGCTAAGATTAACGGTACTTTTACTATTGAAGGTTCCTGGGCAAATGGAGTTAATAACACTGCTAACGCTGAGGGTCATGCAGGTATATTGCAAATATCTCAACGTTCTATTGATAATCTAACAGTTCAAAAATATACGACTTGGTTAACAGGTCAAGGTGTAAATCACCATAGAGAGTTTACCCGTATATGGATTAATGATACTGAGGGTTGGAATAACTGGTTACCTTCCGGTACTTGGGAATCTGTGAACACATACAGAACTGGGATACTTCGTCTTAATAACCAAACTAATGATGACTCTGTATACCCTTATGTGTCTTATACCAAAGAGAAGTATCGCGATACTATCGCTCCGGGGACTTATTATACCGTAGGTGAAATATCATTCCGTGCAGGATCTTCTAATAGATACGATCCGCACTCAGGGGATCAATTATCCAGAATATTGGGAATGGTAACGAATACCGCCACGGCTGGGGAATATGATGGATCCTTGTTCTTAGCTTCCAGACTTCGTAGAACTGATGGAACCGTTGCAGATAGTTCTACTCTTGCTATTAACCGAGACTTGGGTGTTGAATTTACTCATGCTGCCAAAAAAGTACAGATTAATACTGGTAGAGTTACTGCTGATGAATTTTTCCAAAATACCGCACAAAGTAGTTTGGCAAACAGTTCAACCCGTAAAGATTATGTAGATGCAGAAGTAGCGACTAAGGTTTCTAAGGCTGGTGATACCATGACAGGATCCCTAACCTTACCTACTGCAAAACCCCTTTACTTTGGTGCTGGTAATAATACTTATCTAACCCGCTCAGGTGACGATCTGTTTGTTGCTGCAATTGCGGGTACAACCGGTAAAGTCGTTATAGAGGGTAAAGTTAATCCACAAGTTCGTATAGGTACTTCCAATTATAATATATACCATGCTGGTAATAAACCAACTTCAACTGAATTGGGTGTAGTTAATATTGCTGGTGATGTTATGACTGGTAACCTTATTGTGGATGTAGGAACTACTGCTGAACCACAAGTGGGTGTTAGAAGATCTGGACGTAGATTATATATGGCTGATAACGGAGTTACCGTAGGCTTGTATAATATAATTGGCGGATCGTTCATAAATACCTTTATGATTTCCCGAAACATAAATGATGGTAATATTACTGTGGGTTCTGACAGTAATAACACAATTATTCGTGGTGCTGGTAATCTTAAACATGGTACTGCGGATATATATACAACCTCTAATAAGCCATCTCCTGCTGATATTGGTACTCTAACAACCGCCCAAATAAATGCGGAATTAGCAAAGCAAGTTAGTAAAACTGGCGATACCATGAGTGGGGCATTAACTACTACTCAAGTAAATGCAACTAATAACTATGCGTTTGTATCAAGTATAGCACAAACCCACGGTATGTATCTTGGTAATACTGCTTCCGATAAGAGATTGATTCTTGGTGGTGGTAATCCAACTATTGGTGCGGTTCATATTCGTCCACACGGTATAGGTGTTGAAACTAGTCAAACCATATTCAATACTGACGGAACAATTACCAACGGTGCAACTCCAACAGAACCCGGTCATTTGACTAATAAGGTTTATGTGGATGGTCAAATATCGCAACAGGTATCTAAATCTGGCGATACCATGACTGGTCAACTGTTAATACAAACTGCAAATAATGCACCAATACAGTTGAAGAGTACCACTGCTGGGGTTGTTACACCTCAATATATAGTAGCTAACGACTCTACTGGTGCGCAACGTTGGTATATAGGACAAGCTAGTGCGAATTCCCCTGATGTACTTTTGTATAGCACCGGAAACGGAACTTACCTTCGTCTTGAATCAAACCAAGTATCATTCAACAAAAACCCAATATCAACAGCGTTACAGGGTACTGCTGCCGGTTCTCTGGTTCGCCGAGATTTTCTTGAGAGTTCATTGTCGATTCAAACGCCGAATAATGCTATCAAAATTCCTGTTGCCAACTTAAATGACTATCAAACACCCGGATATTACTATCAGGATTCCAACGCAAATGCGGTTTCTGGAAGTAACTACCCAACACCTCAAGCCGGTGCTTTGGTAGTTACTAAAGCGGCTGGTGTAATCCAAGAATATACTATTTACGGAACCGGTGCTCGTTATGTTCGAGCGTTTTATACCAACGTTTGGTCATCATGGGCACTCGTATATGATTCAACTCGTCCACCCGGAGCTACGGCGGTAGGAGCACTTCCGATAGCCGGTGGTACTCTAACTGGCGGTTATTTGCAAATACGGGGTAGTTCAAACCCTATGCTGGAATTACACCAGCCGGGTCAAGCTGCCGCTGTGATGTATTTGACACCAACCGGTCAATTTAGACTGGGTTCAGGAAACGGGGCGGGTGGTGAAACTAATGTTCGTATGACTGTTGAGCCAAACGGTAATGTGTATTCCGCTGGGTCTATAACAAGTGCGGGATATATGTTAGAAGGTGGTGCTCGTGTTTATTCTCCGAATAACCCACAACCGAGTCTAACACCAACCCAAATCGGTAACGCTTTGGCGAGTATGTCTTATGACGCGGTTGGTCAATATGCAATGCTCTTGCTGTATGTTGATAAAGGTAATTGGTTGGTTCCCGGTACTGTGGTTCCCGGTTCACAACTACGTTATTCAACTGCGGAAGGTAAAGATCCGGGCGGCGCACCTCCGGGAAACTGGAGACTGCATGGACGTACAAATCAGGGCGGTCAATGGGGTGGTCGGAACGTTTCTTTGTGGCAACGTGTTAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
44b4fa66cee07ebea27bded1ebeb67a9170fd0c2755f5726406eaeee1bca2069
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5561
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50