Protein

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Genbank accession
UPW42356.1 [GenBank]
Protein name
long-tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MADLKANSTVGGAPIWHKGNFPLSPVGDTLLYKTFKVYTEFDKPQAVDNDFVSKAAGGEYLKNVNFKEGLSFSDKDGASVFIGVPKNTTATATYTASIKLTGQFALETPDNKPFIIFDPNESFSPDVYRLTVMGDMLSRQIYDESGRVFSPGNTPSKAQVGLDLVDNAKQVQLEKSGVQTMTGVLAAPNFISTNPATADNHVARFDQIVIKDSIQDFGYYS
Physico‐chemical
properties
protein length:221 AA
molecular weight: 24014,64050 Da
isoelectric point:5,02755
aromaticity:0,10860
hydropathy:-0,27104

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPW42356.1
1 221
Domain Start End Length (AA) Confidence
N-terminal 1 199 199 0,6137
Central domain 200 210 12 0,0137
C-terminal 211 221 10 0,9553
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-199
Central
200-210
C-terminal
211-221

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage CF-SP2
[NCBI] 		2935508 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW42356.1 [NCBI]
Genbank nucleotide accession
OM912978.1 [NCBI]
CDS location
range 38523 -> 39188
strand +
CDS
ATGGCCGATTTAAAAGCAAATAGTACAGTAGGCGGAGCTCCGATATGGCATAAAGGAAATTTTCCTTTGTCTCCGGTAGGTGATACGCTACTTTATAAGACTTTCAAAGTCTATACAGAATTCGATAAACCTCAAGCAGTAGATAACGATTTTGTTTCTAAAGCCGCTGGAGGAGAATATTTAAAAAACGTTAATTTTAAAGAAGGCTTATCATTTAGCGACAAAGATGGAGCTTCTGTTTTTATTGGTGTTCCTAAAAATACTACAGCAACAGCTACTTATACCGCATCAATAAAATTAACCGGGCAATTCGCTTTAGAAACTCCTGATAATAAACCATTTATCATATTTGACCCAAACGAGTCATTTAGCCCTGATGTATATCGCTTAACTGTTATGGGTGATATGCTTTCTCGTCAAATTTATGATGAATCTGGAAGAGTTTTTTCTCCTGGGAATACTCCGTCAAAAGCGCAAGTTGGTTTAGATTTAGTCGATAACGCTAAGCAAGTTCAACTTGAAAAATCCGGTGTTCAAACAATGACCGGGGTTTTGGCTGCTCCAAACTTTATAAGTACCAATCCGGCAACGGCAGATAATCATGTAGCTCGTTTTGACCAGATTGTAATAAAAGACTCAATTCAAGATTTTGGATATTATAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ed927a696d1ace10558dbfe51eb7b9c7c52db0160b35a0ba7371e7c3a486a29b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3895
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50