Protein

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Genbank accession
UPW42356.1 [GenBank]
Protein name
long-tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TSP
Evidence RBPdetect2
Probability 0,69
Protein sequence
MADLKANSTVGGAPIWHKGNFPLSPVGDTLLYKTFKVYTEFDKPQAVDNDFVSKAAGGEYLKNVNFKEGLSFSDKDGASVFIGVPKNTTATATYTASIKLTGQFALETPDNKPFIIFDPNESFSPDVYRLTVMGDMLSRQIYDESGRVFSPGNTPSKAQVGLDLVDNAKQVQLEKSGVQTMTGVLAAPNFISTNPATADNHVARFDQIVIKDSIQDFGYYS
Physico‐chemical
properties
protein length:221 AA
molecular weight: 24014,64050 Da
isoelectric point:5,02755
aromaticity:0,10860
hydropathy:-0,27104

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
UPW42356.1
1 221 aa
Domain Start End Length (AA) Confidence
N-terminal 1 199 199 0,6137
Central domain 200 210 12 0,0137
C-terminal 211 221 10 0,9553
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Salmonella phage CF-SP2 [NCBI] · taxon 2935508
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Salmonella enterica subsp. enterica [NCBI] · taxon 59201
Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Salmonella

Coding sequence (CDS)

Genbank protein accession
UPW42356.1 [NCBI]
Genbank nucleotide accession
OM912978.1 [NCBI]
CDS location
range 38523 -> 39188
strand +
CDS
ATGGCCGATTTAAAAGCAAATAGTACAGTAGGCGGAGCTCCGATATGGCATAAAGGAAATTTTCCTTTGTCTCCGGTAGGTGATACGCTACTTTATAAGACTTTCAAAGTCTATACAGAATTCGATAAACCTCAAGCAGTAGATAACGATTTTGTTTCTAAAGCCGCTGGAGGAGAATATTTAAAAAACGTTAATTTTAAAGAAGGCTTATCATTTAGCGACAAAGATGGAGCTTCTGTTTTTATTGGTGTTCCTAAAAATACTACAGCAACAGCTACTTATACCGCATCAATAAAATTAACCGGGCAATTCGCTTTAGAAACTCCTGATAATAAACCATTTATCATATTTGACCCAAACGAGTCATTTAGCCCTGATGTATATCGCTTAACTGTTATGGGTGATATGCTTTCTCGTCAAATTTATGATGAATCTGGAAGAGTTTTTTCTCCTGGGAATACTCCGTCAAAAGCGCAAGTTGGTTTAGATTTAGTCGATAACGCTAAGCAAGTTCAACTTGAAAAATCCGGTGTTCAAACAATGACCGGGGTTTTGGCTGCTCCAAACTTTATAAGTACCAATCCGGCAACGGCAGATAATCATGTAGCTCGTTTTGACCAGATTGTAATAAAAGACTCAATTCAAGATTTTGGATATTATAGTTAA

Genome Context

Tertiary structure

UPW42356.1
ESMFold structure
Source ESMFold
pLDDT 39.0
Oligomeric state monomer
Download structure