Protein

View in Explore
Genbank accession
APZ81739.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
Seq2Symm
C1 confidence 0,990
C1 0,990
C2 0,053
C3 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MHLDRISLPGWGGGQGIDDPSPRIQWTLAADASGESQSAYRVQLSTGYDTGKVYGTTQYAKLPILPSLTAITATITVWDASNSTATKTFDFSTGPMSRADWRGAKWITVPGRKAPQLRKTFTTPASGDFYLHIAGAGNITVYVDGVRVTGANTPGMPSYSMRRLYRTIKVPNLAAGQHVVAVHIGRGWFAVESTDAWRWNTAPWKRDPSVMIRTTGVASLITDEGWRATNGQVINADAQWGEVHDMRLATPGWTTVGYDDASWTTATISPEPNAAVVAARHYPEPLGELIDSVTVTNPAQGRWIAEFPEIISGTARVTFPAIPAGTKARIIHGEYIVNNGPNSGRVQVYNAGELWASNFADQEKFQSDIIIFDGAPVVFEADLSFKSVRYVEIFFFDNPAAGVAPTTVQLRRLESATPIRATFACNEPILTRLFSMAVRSELINLHNGAQHDTSYREKIGWTGDSVATRRGASIALDIEPTWRQWTDTQLDDFRTYGIMPVVSPAPPLFAFGDGVKFAPEWGAAIILLGWENYLLSGNSAHLAQVYERTKAVIEWFYAQKGQGYAPPNTWVSEYGDWASTRGNGQDYGKDSSATAYMIFMMDVFSKMSTVLGRTAAADLWAGRVVFERNAWAARLYSPSLGAYLPKENVSPPTFKSAPTLLAYELGVEPAAHGNAPIDKLATETAAIGDINVGLSGAETLLTALYDRGHADLAMQLLRKDDEPSWGHGAAQGATTLWDGFGDLHIQSTLSHHMHGGYLHFMIIRLAGIRPTAPGEYTIVPSYQTNTLSCSIDTGYGPVGVSWNASTLTITVPPGTKVTFAGNLLPSGTNIIAR
Physico‐chemical
properties
protein length:833 AA
molecular weight: 90440,70930 Da
isoelectric point:6,00466
aromaticity:0,10444
hydropathy:-0,15798

Domains

View on InterPro
Domain architecture
APZ81739.1
1 833 aa
ATT 13–96 · STR 97–282 · STR 285–413 · STR 417–451 · ATT 452–819 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Rathayibacter phage NCPPB3778 [NCBI] · taxon 1909694
Uroviricota Caudoviricetes Rathayibacter phage NCPPB3778
Host
Rathayibacter toxicus [NCBI] · taxon 145458
Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rathayibacter Rathayibacter toxicus

Coding sequence (CDS)

Genbank protein accession
APZ81739.1 [NCBI]
Genbank nucleotide accession
KX911187.2 [NCBI]
CDS location
range 21273 -> 23774
strand +
CDS
ATGCATCTTGACAGAATCTCGCTCCCTGGCTGGGGTGGTGGGCAGGGTATTGATGACCCTTCCCCACGTATCCAGTGGACTCTAGCGGCAGATGCTAGCGGCGAAAGCCAGTCAGCGTATCGCGTTCAGCTTTCTACCGGATATGACACCGGAAAGGTGTATGGTACTACACAGTATGCCAAGCTCCCGATCTTACCGTCACTGACGGCGATTACTGCTACCATCACCGTATGGGACGCGTCGAACTCTACGGCCACTAAAACCTTCGATTTTTCTACAGGCCCAATGTCGCGTGCGGATTGGCGTGGAGCGAAATGGATTACGGTCCCGGGGCGTAAAGCGCCGCAGTTGAGGAAAACATTTACGACTCCCGCGTCGGGCGATTTCTATCTGCATATCGCAGGCGCCGGGAATATCACCGTGTATGTAGATGGTGTGCGAGTCACTGGCGCTAACACTCCTGGTATGCCCAGTTATTCTATGCGGCGTTTATATCGGACAATTAAGGTCCCCAATCTGGCGGCAGGTCAGCATGTCGTTGCTGTGCATATTGGCCGCGGCTGGTTTGCTGTAGAGTCCACTGACGCGTGGAGATGGAATACGGCGCCCTGGAAACGCGACCCTAGCGTCATGATCCGTACAACTGGCGTTGCGTCGCTTATCACCGATGAGGGCTGGAGGGCCACCAACGGACAGGTAATTAATGCGGACGCACAATGGGGAGAAGTGCACGATATGCGCCTCGCTACCCCCGGGTGGACAACTGTGGGGTACGATGACGCTTCGTGGACTACTGCGACAATATCGCCAGAACCTAATGCCGCGGTCGTTGCGGCGAGGCATTATCCCGAACCACTCGGTGAGCTTATCGACTCGGTGACAGTAACCAATCCCGCACAAGGTCGGTGGATAGCGGAATTCCCCGAAATCATATCCGGTACGGCGCGCGTCACATTCCCTGCTATCCCGGCTGGCACTAAAGCTCGAATTATTCACGGTGAATACATCGTGAATAATGGACCGAATAGCGGCAGGGTGCAGGTATATAACGCGGGCGAATTGTGGGCTTCTAATTTTGCGGATCAAGAAAAATTCCAATCGGATATCATTATCTTTGATGGCGCCCCTGTGGTCTTTGAGGCAGACTTGTCATTCAAGTCCGTCAGATATGTGGAAATCTTTTTTTTCGATAATCCGGCCGCGGGGGTTGCGCCGACTACGGTGCAGCTTAGGCGCCTGGAGTCAGCTACCCCCATTCGAGCAACTTTCGCATGTAACGAACCGATTCTTACTCGGCTTTTTAGTATGGCCGTGCGCAGTGAGCTGATAAACCTTCACAATGGCGCCCAGCACGATACCTCGTATCGTGAGAAAATCGGGTGGACTGGGGATAGTGTAGCCACCCGCAGAGGCGCATCTATCGCCCTAGACATAGAGCCCACATGGAGGCAGTGGACAGATACACAGTTGGATGACTTCCGTACATATGGGATCATGCCGGTAGTGTCACCCGCACCACCGCTTTTTGCTTTCGGGGATGGTGTGAAATTCGCGCCGGAGTGGGGTGCCGCGATTATTCTTCTCGGGTGGGAGAACTATCTTTTAAGCGGAAATAGCGCGCATCTAGCTCAAGTATATGAGCGCACGAAAGCAGTTATTGAGTGGTTTTATGCCCAGAAAGGGCAGGGTTATGCCCCGCCTAACACGTGGGTTTCCGAATATGGGGACTGGGCTTCAACACGTGGGAATGGGCAGGACTACGGAAAAGATTCTTCCGCGACGGCTTATATGATTTTTATGATGGATGTTTTTAGTAAAATGTCCACTGTGCTAGGTCGCACCGCTGCTGCTGATCTTTGGGCTGGCCGCGTTGTGTTCGAGCGGAACGCTTGGGCTGCGCGTTTATATTCGCCTTCTCTCGGCGCTTATCTACCTAAAGAAAATGTCTCCCCCCCGACCTTTAAAAGCGCACCAACACTTCTCGCATATGAGCTAGGAGTGGAGCCCGCAGCTCACGGGAATGCACCGATTGATAAGCTGGCGACGGAGACCGCAGCTATCGGTGACATTAACGTCGGGCTTTCGGGTGCGGAAACTCTTCTTACTGCGCTATATGATCGAGGACATGCCGACCTCGCTATGCAGCTACTGAGGAAGGATGATGAGCCATCGTGGGGCCACGGTGCCGCACAGGGCGCCACAACGCTGTGGGATGGGTTTGGGGATCTTCACATCCAATCCACGCTCAGCCACCATATGCACGGCGGCTATCTGCACTTCATGATAATAAGACTTGCGGGTATAAGGCCCACAGCACCCGGTGAATACACGATCGTACCCAGCTATCAAACGAATACTTTATCGTGCTCTATAGATACCGGATATGGGCCAGTAGGTGTATCATGGAATGCAAGCACTTTAACGATCACAGTCCCGCCCGGGACTAAGGTCACATTCGCGGGCAATTTGCTCCCGTCCGGTACAAACATCATTGCTCGATAG

Genome Context

Tertiary structure

APZ81739.1
ColabFold structure
Source ColabFold
pLDDT 88.8
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete genome sequence of the Rathayibacter toxicus phage CS14Phi Schneider,W.L., Sechler,A.J. and Rogers,E.E. 2017-10-19 — GenBank