Protein

View in Explore
Genbank accession
APZ81739.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MHLDRISLPGWGGGQGIDDPSPRIQWTLAADASGESQSAYRVQLSTGYDTGKVYGTTQYAKLPILPSLTAITATITVWDASNSTATKTFDFSTGPMSRADWRGAKWITVPGRKAPQLRKTFTTPASGDFYLHIAGAGNITVYVDGVRVTGANTPGMPSYSMRRLYRTIKVPNLAAGQHVVAVHIGRGWFAVESTDAWRWNTAPWKRDPSVMIRTTGVASLITDEGWRATNGQVINADAQWGEVHDMRLATPGWTTVGYDDASWTTATISPEPNAAVVAARHYPEPLGELIDSVTVTNPAQGRWIAEFPEIISGTARVTFPAIPAGTKARIIHGEYIVNNGPNSGRVQVYNAGELWASNFADQEKFQSDIIIFDGAPVVFEADLSFKSVRYVEIFFFDNPAAGVAPTTVQLRRLESATPIRATFACNEPILTRLFSMAVRSELINLHNGAQHDTSYREKIGWTGDSVATRRGASIALDIEPTWRQWTDTQLDDFRTYGIMPVVSPAPPLFAFGDGVKFAPEWGAAIILLGWENYLLSGNSAHLAQVYERTKAVIEWFYAQKGQGYAPPNTWVSEYGDWASTRGNGQDYGKDSSATAYMIFMMDVFSKMSTVLGRTAAADLWAGRVVFERNAWAARLYSPSLGAYLPKENVSPPTFKSAPTLLAYELGVEPAAHGNAPIDKLATETAAIGDINVGLSGAETLLTALYDRGHADLAMQLLRKDDEPSWGHGAAQGATTLWDGFGDLHIQSTLSHHMHGGYLHFMIIRLAGIRPTAPGEYTIVPSYQTNTLSCSIDTGYGPVGVSWNASTLTITVPPGTKVTFAGNLLPSGTNIIAR
Physico‐chemical
properties
protein length:833 AA
molecular weight: 90440,70930 Da
isoelectric point:6,00466
aromaticity:0,10444
hydropathy:-0,15798

Domains

Domains [InterPro]
IPR013783
STR
13–94
IPR013783 G3DSA:2.60.120.260 G3DSA:2.60.120.260 IPR012341
IPR016007
Unmapped
14–819
IPR016007
PF25788
ATT
15–96
PF25788 IPR013737 IPR008902 IPR035396
IPR008928
ATT
452–819
IPR008928
APZ81739.1
1 833
Architecture
ATT
STR
STR
STR
ATT
ATT 13-96 | STR 97-282 | STR 285-413 | STR 417-451 | ATT 452-819 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rathayibacter phage NCPPB3778
[NCBI] 		1909694 No lineage information
Host Rathayibacter toxicus
[NCBI] 		145458 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Micrococcales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APZ81739.1 [NCBI]
Genbank nucleotide accession
KX911187.2 [NCBI]
CDS location
range 21273 -> 23774
strand +
CDS
ATGCATCTTGACAGAATCTCGCTCCCTGGCTGGGGTGGTGGGCAGGGTATTGATGACCCTTCCCCACGTATCCAGTGGACTCTAGCGGCAGATGCTAGCGGCGAAAGCCAGTCAGCGTATCGCGTTCAGCTTTCTACCGGATATGACACCGGAAAGGTGTATGGTACTACACAGTATGCCAAGCTCCCGATCTTACCGTCACTGACGGCGATTACTGCTACCATCACCGTATGGGACGCGTCGAACTCTACGGCCACTAAAACCTTCGATTTTTCTACAGGCCCAATGTCGCGTGCGGATTGGCGTGGAGCGAAATGGATTACGGTCCCGGGGCGTAAAGCGCCGCAGTTGAGGAAAACATTTACGACTCCCGCGTCGGGCGATTTCTATCTGCATATCGCAGGCGCCGGGAATATCACCGTGTATGTAGATGGTGTGCGAGTCACTGGCGCTAACACTCCTGGTATGCCCAGTTATTCTATGCGGCGTTTATATCGGACAATTAAGGTCCCCAATCTGGCGGCAGGTCAGCATGTCGTTGCTGTGCATATTGGCCGCGGCTGGTTTGCTGTAGAGTCCACTGACGCGTGGAGATGGAATACGGCGCCCTGGAAACGCGACCCTAGCGTCATGATCCGTACAACTGGCGTTGCGTCGCTTATCACCGATGAGGGCTGGAGGGCCACCAACGGACAGGTAATTAATGCGGACGCACAATGGGGAGAAGTGCACGATATGCGCCTCGCTACCCCCGGGTGGACAACTGTGGGGTACGATGACGCTTCGTGGACTACTGCGACAATATCGCCAGAACCTAATGCCGCGGTCGTTGCGGCGAGGCATTATCCCGAACCACTCGGTGAGCTTATCGACTCGGTGACAGTAACCAATCCCGCACAAGGTCGGTGGATAGCGGAATTCCCCGAAATCATATCCGGTACGGCGCGCGTCACATTCCCTGCTATCCCGGCTGGCACTAAAGCTCGAATTATTCACGGTGAATACATCGTGAATAATGGACCGAATAGCGGCAGGGTGCAGGTATATAACGCGGGCGAATTGTGGGCTTCTAATTTTGCGGATCAAGAAAAATTCCAATCGGATATCATTATCTTTGATGGCGCCCCTGTGGTCTTTGAGGCAGACTTGTCATTCAAGTCCGTCAGATATGTGGAAATCTTTTTTTTCGATAATCCGGCCGCGGGGGTTGCGCCGACTACGGTGCAGCTTAGGCGCCTGGAGTCAGCTACCCCCATTCGAGCAACTTTCGCATGTAACGAACCGATTCTTACTCGGCTTTTTAGTATGGCCGTGCGCAGTGAGCTGATAAACCTTCACAATGGCGCCCAGCACGATACCTCGTATCGTGAGAAAATCGGGTGGACTGGGGATAGTGTAGCCACCCGCAGAGGCGCATCTATCGCCCTAGACATAGAGCCCACATGGAGGCAGTGGACAGATACACAGTTGGATGACTTCCGTACATATGGGATCATGCCGGTAGTGTCACCCGCACCACCGCTTTTTGCTTTCGGGGATGGTGTGAAATTCGCGCCGGAGTGGGGTGCCGCGATTATTCTTCTCGGGTGGGAGAACTATCTTTTAAGCGGAAATAGCGCGCATCTAGCTCAAGTATATGAGCGCACGAAAGCAGTTATTGAGTGGTTTTATGCCCAGAAAGGGCAGGGTTATGCCCCGCCTAACACGTGGGTTTCCGAATATGGGGACTGGGCTTCAACACGTGGGAATGGGCAGGACTACGGAAAAGATTCTTCCGCGACGGCTTATATGATTTTTATGATGGATGTTTTTAGTAAAATGTCCACTGTGCTAGGTCGCACCGCTGCTGCTGATCTTTGGGCTGGCCGCGTTGTGTTCGAGCGGAACGCTTGGGCTGCGCGTTTATATTCGCCTTCTCTCGGCGCTTATCTACCTAAAGAAAATGTCTCCCCCCCGACCTTTAAAAGCGCACCAACACTTCTCGCATATGAGCTAGGAGTGGAGCCCGCAGCTCACGGGAATGCACCGATTGATAAGCTGGCGACGGAGACCGCAGCTATCGGTGACATTAACGTCGGGCTTTCGGGTGCGGAAACTCTTCTTACTGCGCTATATGATCGAGGACATGCCGACCTCGCTATGCAGCTACTGAGGAAGGATGATGAGCCATCGTGGGGCCACGGTGCCGCACAGGGCGCCACAACGCTGTGGGATGGGTTTGGGGATCTTCACATCCAATCCACGCTCAGCCACCATATGCACGGCGGCTATCTGCACTTCATGATAATAAGACTTGCGGGTATAAGGCCCACAGCACCCGGTGAATACACGATCGTACCCAGCTATCAAACGAATACTTTATCGTGCTCTATAGATACCGGATATGGGCCAGTAGGTGTATCATGGAATGCAAGCACTTTAACGATCACAGTCCCGCCCGGGACTAAGGTCACATTCGCGGGCAATTTGCTCCCGTCCGGTACAAACATCATTGCTCGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
582b261ec2f1aa1ca24cc056856b3bf78729ec70cbd3605e1568e7682b5f61e7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8881
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of the Rathayibacter toxicus phage CS14Phi Schneider,W.L., Sechler,A.J. and Rogers,E.E. 2017-10-19 — GenBank