Protein

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Genbank accession
XCO39126.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDQEIKTVIQYPTGSTEFDIPFDYLSRKFVRVSLVSDDNRRLLSNITEYRYVSKTRVKLLVATTGFDRVEVRRFTSASERVVDFSDGSVLRANDLNVSQLQSAHIAEEARDAALLAMPEDDAGNLDARNRKIVRLAPGELGTDAVNKDQLDTILGEAGGVLSDIKDLSDDIREYTQTFADDSTMVKSVAWVYNGGAAIGGETSFVIDRPEPVLSVPYIEINGSRNYRGWHYSYNQAERRVTLVKPLSQNDFVVCITAESKLPLSDLLGSAEGASGIGVTGGGSVQDYIDVVKASGQSVIYAAAHGVVADDSVDVSDKLQALIDSSGRTPIILPPTIAIKKPIVYRSRTVLLGHQESFTQVKLMNGFSGASAFVPASKAQTGTDSAILAYLNIVDLSAVNVGAGSNSTKCGIDVTGSFNLKLLAITGVRLDNTIVSEPGTALQHTRRLRIDGLNGSNVNRHIYMPGDGTSRFSYGDIYINDFKTSASCARSSVIESTDGLQVIGAVIFPNGGLRVSGNYITITGCHLFEPKAPLGSGEIPAGIHVTKRTPTVYSEYVNISATAVAFAGRLANTTIGNPAQVNEGAPGILIERVRVFNIQVSVNHSSKESMRIVESTNGVVSLASREANTQLLGSGALPPGTYDSLRLEGCGEVVVQMSDTSASRQHAVYMDDECVGCVVTGAAGRGHILGTNVRLPLNPQNRVLMTFDGEGSIRSLYDSNPPINRFVTAPTGSTAPSVTGGINNMFVKFQNGAVTNVTDLPDVPARREVTVNLNDNNATRLVSTVNGGKFRTRDGNNIMGRGAFARFIRDPATGDLVQL
Physico‐chemical
properties
protein length:818 AA
molecular weight: 87488,35770 Da
isoelectric point:5,79123
aromaticity:0,06235
hydropathy:-0,11308

Domains

Domains [InterPro]
IPR005604
ATT
1–127
IPR005604 IPR011050
DC_0778
STR
1–812
DC_0778
XCO39126.1
1 818
Architecture
ATT
STR
ATT 1-127 | STR 128-812 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO39126.1
1 818
Domain Start End Length (AA) Confidence
N-terminal 1 314 314 0,9953
Central domain 315 721 408 0,9927
C-terminal 722 818 96 0,9580
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-314
Central
315-721
C-terminal
722-818

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146026
[NCBI] 		3232206 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO39126.1 [NCBI]
Genbank nucleotide accession
PP889476.1 [NCBI]
CDS location
range 35297 -> 37753
strand +
CDS
ATGGACCAAGAAATTAAAACAGTCATCCAGTATCCTACAGGGTCCACTGAGTTTGACATCCCGTTCGACTACCTGTCCCGTAAGTTTGTCCGCGTATCGCTGGTGTCTGACGACAACCGCAGACTGTTGAGTAACATCACCGAGTACCGATACGTGTCTAAGACCAGAGTTAAACTGCTGGTAGCGACCACTGGTTTCGACCGTGTAGAGGTTCGACGGTTCACATCGGCGTCAGAGCGAGTGGTGGACTTTAGCGACGGTTCTGTATTACGCGCCAACGACCTTAACGTCTCACAGCTACAGTCTGCGCATATCGCTGAAGAAGCACGTGATGCCGCACTTCTGGCAATGCCTGAGGATGACGCTGGTAACCTCGACGCCCGTAACCGTAAGATTGTGCGACTGGCTCCCGGTGAGCTTGGCACAGACGCCGTCAACAAGGACCAGTTAGATACCATCTTGGGTGAGGCTGGAGGCGTACTTTCTGACATTAAAGACCTGAGTGACGACATTCGGGAATACACCCAGACGTTTGCTGATGATAGCACCATGGTGAAAAGCGTGGCTTGGGTGTATAACGGAGGAGCAGCCATAGGGGGTGAGACCTCATTTGTCATAGACAGGCCTGAGCCTGTGTTATCGGTGCCATACATTGAAATAAACGGTTCACGTAACTACCGTGGATGGCATTACTCGTATAACCAAGCGGAGCGAAGAGTCACCCTTGTTAAGCCGCTGTCACAGAACGACTTCGTTGTTTGCATCACGGCTGAGAGTAAGTTGCCATTGAGTGACCTGCTGGGTAGCGCAGAAGGGGCAAGCGGCATCGGCGTGACTGGTGGAGGGAGCGTACAAGACTACATTGATGTTGTTAAGGCGTCTGGGCAGAGCGTTATATACGCGGCGGCTCACGGTGTGGTTGCAGACGACTCAGTCGACGTATCAGATAAACTTCAGGCTCTTATTGACTCAAGCGGGCGAACTCCGATTATTCTGCCGCCGACCATTGCCATCAAAAAGCCTATAGTGTATCGGTCAAGAACGGTGCTACTTGGCCACCAAGAATCTTTCACTCAGGTAAAATTGATGAATGGATTCTCTGGTGCCTCAGCTTTTGTTCCGGCAAGCAAGGCCCAAACAGGGACCGACTCCGCGATTCTGGCCTACCTAAATATAGTAGACCTTTCGGCTGTTAACGTTGGCGCTGGTTCCAACTCCACGAAGTGTGGTATTGATGTAACTGGTAGCTTCAACCTCAAGTTACTGGCTATCACTGGTGTACGCCTAGATAACACTATCGTATCAGAGCCGGGTACCGCCCTCCAGCACACACGCAGGCTTCGTATAGACGGTCTCAACGGGTCTAACGTTAATCGTCACATCTACATGCCCGGTGACGGAACCTCTCGGTTCTCATACGGGGACATCTACATCAACGACTTTAAGACATCGGCAAGCTGCGCGCGGTCCTCTGTCATTGAGTCCACAGATGGCCTTCAGGTGATTGGGGCAGTAATCTTCCCTAATGGCGGCTTGCGGGTTAGTGGTAACTACATCACCATTACTGGGTGCCACCTCTTCGAGCCTAAGGCTCCATTAGGTTCCGGTGAGATTCCCGCAGGTATCCACGTGACCAAGAGAACCCCCACAGTGTATAGCGAGTATGTCAACATCTCAGCCACAGCTGTAGCATTCGCTGGGCGACTTGCCAACACTACAATAGGGAACCCTGCGCAGGTCAACGAGGGCGCTCCGGGTATTCTTATTGAGCGCGTGAGGGTGTTTAACATTCAGGTGTCCGTCAACCACTCCTCCAAGGAGTCGATGAGGATTGTTGAGAGCACCAATGGGGTAGTCAGCCTAGCATCCCGCGAAGCGAACACTCAGCTTCTCGGCAGCGGGGCCCTCCCTCCGGGAACTTACGATTCTCTGCGCCTTGAGGGCTGCGGTGAGGTGGTCGTCCAGATGAGTGACACGTCGGCATCCCGCCAACACGCAGTGTACATGGACGATGAGTGCGTTGGTTGCGTGGTGACAGGGGCCGCAGGTCGGGGACATATCCTCGGTACCAATGTGAGGCTCCCACTTAACCCTCAAAACAGGGTCCTGATGACGTTCGATGGTGAGGGAAGCATCCGTTCGCTGTATGATAGTAACCCGCCTATCAACCGATTCGTTACTGCGCCAACTGGTAGCACTGCGCCGTCAGTTACTGGCGGAATTAACAACATGTTCGTCAAGTTCCAGAACGGAGCTGTGACAAACGTTACGGACCTTCCTGACGTGCCTGCTAGGAGAGAGGTAACAGTAAACCTTAATGACAACAACGCCACGCGCCTTGTTTCTACCGTAAACGGTGGCAAATTCAGGACGAGAGACGGGAACAACATCATGGGAAGGGGCGCATTTGCTCGATTTATCCGAGACCCGGCTACGGGCGACTTAGTTCAGCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5f72ae31ea66083a7b9c65be2aec111a995ab3204a69a8170acadae7127201c0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3130
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank