Protein

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Genbank accession
QIG72940.1 [GenBank]
Protein name
tail spike protein with colonic acid degradation activity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 1,00
Protein sequence
MVDFTNTAEFILPAFNLTGSGPLYTGYGAAGNPVDGTAFGLKIKQANSFSITDPIIKQITNGIDVSQTPSWQDGGTIRGGRISHCYRGIWIHDVGEGVFVTGANVSDCVFGVVVDSGNSNLANGQTTRCSVGLLIGPSSGAGVNGAHASVMGWNSRHNKYNLSCQNVTLGHYIGGSNFIGGQGGADQGGIQIYNSKGIMIDGGQTAYCDISVDATSQLVMRDVIFRGPVNITVASGGSFDAKGCFAMAGATLTLNGSTFSGNTP
Physico‐chemical
properties
protein length:264 AA
molecular weight: 27133,96840 Da
isoelectric point:5,87752
aromaticity:0,08333
hydropathy:0,03750

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
QIG72940.1
1 264 aa
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0067
Central domain 11 253 244 0,9987
C-terminal 254 264 10 0,1943
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Rhizobium phage RHph_N3_2 [NCBI] · taxon 2509747
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host No host information

Coding sequence (CDS)

Genbank protein accession
QIG72940.1 [NCBI]
Genbank nucleotide accession
MN988526.1 [NCBI]
CDS location
range 15798 -> 16592
strand +
CDS
ATGGTCGATTTTACCAATACCGCTGAATTCATTCTCCCTGCCTTCAACCTCACCGGCTCGGGTCCGCTCTATACGGGCTATGGTGCCGCGGGGAACCCGGTGGACGGAACGGCATTCGGCCTGAAGATCAAGCAGGCCAATTCCTTCTCAATCACCGATCCGATCATTAAGCAGATCACGAACGGGATTGATGTTTCGCAGACGCCATCATGGCAGGACGGCGGCACGATCCGCGGCGGTCGAATTTCCCACTGCTATCGCGGCATCTGGATTCACGATGTTGGGGAAGGGGTTTTCGTCACCGGGGCCAACGTTTCGGACTGCGTCTTCGGCGTGGTCGTGGACAGCGGCAACAGCAACCTTGCGAACGGGCAGACAACGCGCTGCTCTGTCGGGCTGCTCATCGGTCCATCTTCAGGCGCAGGCGTGAATGGCGCTCATGCTTCGGTAATGGGCTGGAATTCGCGCCACAACAAATACAATCTGTCCTGCCAGAACGTCACGCTTGGACATTATATCGGCGGCAGCAACTTCATCGGCGGTCAGGGTGGCGCGGATCAGGGCGGAATCCAGATCTACAATTCCAAGGGCATTATGATCGACGGCGGCCAGACAGCCTATTGCGATATCTCGGTGGACGCTACCAGTCAGCTCGTCATGCGGGATGTGATCTTCCGCGGCCCGGTCAATATCACGGTTGCCTCTGGTGGTTCTTTCGATGCAAAGGGCTGTTTTGCGATGGCCGGCGCGACTCTCACACTCAACGGCTCGACCTTCAGCGGCAATACGCCTTAA

Genome Context

Tertiary structure

QIG72940.1
ESMFold structure
Source ESMFold
pLDDT 85.5
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank