Protein

View in Explore
Genbank accession
QIG72940.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MVDFTNTAEFILPAFNLTGSGPLYTGYGAAGNPVDGTAFGLKIKQANSFSITDPIIKQITNGIDVSQTPSWQDGGTIRGGRISHCYRGIWIHDVGEGVFVTGANVSDCVFGVVVDSGNSNLANGQTTRCSVGLLIGPSSGAGVNGAHASVMGWNSRHNKYNLSCQNVTLGHYIGGSNFIGGQGGADQGGIQIYNSKGIMIDGGQTAYCDISVDATSQLVMRDVIFRGPVNITVASGGSFDAKGCFAMAGATLTLNGSTFSGNTP
Physico‐chemical
properties
protein length:264 AA
molecular weight: 27133,96840 Da
isoelectric point:5,87752
aromaticity:0,08333
hydropathy:0,03750

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_N3_2
[NCBI] 		2509747 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG72940.1 [NCBI]
Genbank nucleotide accession
MN988526 [NCBI]
CDS location
range 15798 -> 16592
strand +
CDS
ATGGTCGATTTTACCAATACCGCTGAATTCATTCTCCCTGCCTTCAACCTCACCGGCTCGGGTCCGCTCTATACGGGCTATGGTGCCGCGGGGAACCCGGTGGACGGAACGGCATTCGGCCTGAAGATCAAGCAGGCCAATTCCTTCTCAATCACCGATCCGATCATTAAGCAGATCACGAACGGGATTGATGTTTCGCAGACGCCATCATGGCAGGACGGCGGCACGATCCGCGGCGGTCGAATTTCCCACTGCTATCGCGGCATCTGGATTCACGATGTTGGGGAAGGGGTTTTCGTCACCGGGGCCAACGTTTCGGACTGCGTCTTCGGCGTGGTCGTGGACAGCGGCAACAGCAACCTTGCGAACGGGCAGACAACGCGCTGCTCTGTCGGGCTGCTCATCGGTCCATCTTCAGGCGCAGGCGTGAATGGCGCTCATGCTTCGGTAATGGGCTGGAATTCGCGCCACAACAAATACAATCTGTCCTGCCAGAACGTCACGCTTGGACATTATATCGGCGGCAGCAACTTCATCGGCGGTCAGGGTGGCGCGGATCAGGGCGGAATCCAGATCTACAATTCCAAGGGCATTATGATCGACGGCGGCCAGACAGCCTATTGCGATATCTCGGTGGACGCTACCAGTCAGCTCGTCATGCGGGATGTGATCTTCCGCGGCCCGGTCAATATCACGGTTGCCTCTGGTGGTTCTTTCGATGCAAAGGGCTGTTTTGCGATGGCCGGCGCGACTCTCACACTCAACGGCTCGACCTTCAGCGGCAATACGCCTTAA

Tertiary structure

PDB ID
7fb0a286c6c7608cd14df00b3257511be653dc1161b2f3475c727cfb412042eb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8553
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank