Phage RBP Database

Genbank accession

QJF74613.1 [GenBank]

Protein name

putative tail tubular protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

Seq2Symm

C6 confidence 0,675

C6	0,675
I	0,017
C3	0,014

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MAYNESAYQNLLFGVSQQAPQDRLPGQLDAQLNMTSDLVAGLRRRAAVGVTSDIGAYSDLSKVKQYNTDMGGVAVSMVVDTGTGTVRVVEENSGNVLASLTDPYLTAASARVIRMVTLDDTVWVCNVDRAPVVSASAERGNYPNPDNMGYFYVVAGSPSKTYSVTFTNRATGASTDISWTTPNGTSVGDAAASTPEAIAEQLVSLGNSSWAMYGAVLTRVGAYVTVRTTTVSVTLSSVSGSTYVRASNAGSIRDPAELPARLVGANGYIIATGTSNTKTYYRYDDSSKVWLEDVKWEDMVSLSNMPIQIQRSDAGVYTIVTPVYERRSAGDAKTNPVFKFTTAGITGMAAFQGRLVLLSNEYVCMSASDNPLRWFRSTLAALADNDPIEVAAQGSLTAPYEYALNFNKDLVLFSKRYQGIMPGSGIVTPRTANLALMTRYDVDVNAEPVACGRSMFFGAPRSLGYVGMHELTPSQYSDSQYVADDVTSHIPRYVQGPFRFIAASTTGNLMVAGAANPNELLVHEYLWSGAEKVHASWHKWTFAWPVVDVYFSGDVIVALFGVAGKLVICRVDLQRGAGDVSPTVARLDFYTDVTCVVPGELTVPAVMSSLGADIRAFKIGGANAYLGQKVFSSALGTSGLVLSVPEAVVGDRYTVGFPFVSSCTLTPAVIKDAKGVPITTSRAVLHRYRVSVANTGQFAYNVRDDIRQTGDTTTTPLRLYSQQLGAGLPLADSATVTIPARVDMSTGMLTLESDDYYDLNVRSVEYGFRYHQRFRRA

Physico‐chemical properties

protein length:	777 AA
molecular weight:	83604,29660 Da
isoelectric point:	5,78947
aromaticity:	0,09395
hydropathy:	-0,01197

Domain architecture

QJF74613.1

1 777 aa

TTP 1–776 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR058003
TTP

IPR058003

QJF74613.1

1777 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0058
STR

DC_0058

QJF74613.1

1777 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR058003	TTP	DC_0684	1	776	InterPro cluster	Tail tubular protein gp12	Central	High	Text match	1810 proteins / 1902 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

QJF74613.1

1 777 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	138	138	0,9909
Central domain	139	342	205	0,2041
C-terminal	343	777	434	0,2156

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Pseudomonas phage MR16 [NCBI] · taxon 2711180

Uroviricota Caudoviricetes Autographivirales Autoscriptoviridae Pseudomonas phage MR16

Host No host information

Genbank protein accession

QJF74613.1 [NCBI]

Genbank nucleotide accession

MT104476 [NCBI]

CDS location

range 26205 -> 28538
strand +

CDS

ATGGCCTACAATGAAAGTGCGTATCAGAACCTGCTGTTTGGTGTAAGTCAACAAGCGCCCCAGGATCGTCTACCGGGGCAGTTGGATGCCCAACTTAACATGACATCTGATCTTGTGGCAGGGCTCCGTAGACGCGCCGCAGTTGGGGTAACATCCGACATTGGGGCGTACAGCGACCTATCCAAGGTGAAGCAGTACAACACGGATATGGGCGGCGTTGCCGTGTCAATGGTAGTCGACACCGGTACTGGCACCGTGCGTGTGGTAGAGGAGAACTCCGGCAACGTCCTCGCCAGCCTGACCGACCCGTACTTGACAGCGGCCAGTGCCCGCGTAATCCGTATGGTGACGCTGGACGACACTGTTTGGGTCTGTAACGTGGACCGGGCACCCGTAGTCTCAGCCAGTGCAGAGCGCGGGAACTACCCGAACCCCGACAACATGGGGTACTTCTACGTAGTTGCCGGGTCCCCGTCCAAAACGTACTCGGTGACATTCACTAACCGTGCCACGGGGGCCAGTACGGATATATCGTGGACAACCCCTAATGGCACCTCTGTGGGTGACGCTGCGGCCAGTACACCCGAGGCCATTGCCGAACAACTAGTGTCCCTCGGTAACAGCTCATGGGCGATGTACGGCGCCGTGCTTACTCGCGTAGGGGCCTATGTGACCGTGCGCACTACAACTGTAAGTGTGACACTAAGTTCTGTGAGCGGCAGCACTTACGTACGCGCGTCGAACGCAGGCAGCATACGCGACCCAGCAGAACTGCCTGCGCGGCTCGTGGGTGCCAACGGTTATATTATCGCCACCGGCACCAGCAACACGAAGACGTACTACCGCTATGATGACAGTAGTAAGGTCTGGTTGGAGGACGTGAAGTGGGAGGACATGGTGTCCTTATCCAACATGCCCATCCAGATACAGCGCAGTGACGCGGGCGTGTACACAATCGTGACGCCGGTTTACGAGCGACGTAGTGCTGGTGACGCCAAGACCAACCCGGTATTCAAGTTCACGACAGCGGGCATAACCGGGATGGCTGCCTTCCAAGGCCGTCTCGTCTTACTCTCAAATGAATACGTGTGCATGTCCGCGAGTGATAACCCACTGCGCTGGTTCCGCAGTACACTCGCTGCACTGGCGGATAACGACCCTATCGAGGTAGCTGCACAAGGGAGCCTAACAGCCCCGTATGAGTACGCATTGAACTTCAACAAGGACTTGGTGCTCTTCTCGAAACGGTATCAAGGGATTATGCCGGGAAGTGGTATCGTCACACCACGTACAGCCAACCTTGCACTGATGACCCGCTATGACGTGGATGTCAACGCCGAGCCTGTGGCTTGTGGTCGCTCCATGTTCTTTGGCGCACCTCGCAGTCTCGGGTACGTAGGGATGCACGAGCTTACCCCGAGCCAATACAGCGACAGCCAGTACGTAGCGGATGATGTGACGAGTCATATACCCCGGTACGTGCAAGGGCCATTCAGATTCATCGCGGCTAGTACCACGGGCAACCTGATGGTGGCAGGGGCCGCAAACCCCAACGAGCTGCTGGTACATGAATACCTGTGGTCCGGTGCAGAGAAGGTGCACGCATCCTGGCACAAATGGACGTTTGCTTGGCCTGTGGTGGACGTGTACTTCTCCGGCGACGTTATTGTGGCCCTGTTTGGGGTTGCTGGCAAGTTGGTTATATGCCGCGTGGACCTGCAGCGTGGGGCCGGTGACGTCAGCCCGACAGTTGCGCGACTGGACTTCTACACCGACGTTACTTGCGTAGTTCCAGGGGAGTTGACTGTACCCGCCGTGATGTCCTCGTTAGGTGCGGATATTCGCGCCTTTAAGATAGGCGGGGCAAATGCGTACCTGGGGCAGAAGGTGTTCAGTTCTGCACTGGGCACAAGCGGTTTAGTACTCAGCGTCCCCGAGGCGGTTGTAGGGGACAGATACACTGTAGGGTTCCCGTTCGTATCTAGCTGTACGTTGACGCCTGCAGTTATTAAAGACGCCAAGGGCGTGCCGATCACAACTAGCCGAGCAGTCCTCCACCGCTACAGGGTGTCCGTGGCCAACACTGGCCAGTTCGCCTACAACGTCCGCGACGATATCCGGCAAACAGGGGACACCACAACGACCCCGCTACGCCTGTACTCGCAGCAACTTGGCGCTGGCCTGCCGCTAGCCGACTCGGCCACCGTCACAATTCCCGCCCGTGTGGATATGAGTACCGGCATGTTAACCCTGGAGTCCGACGATTACTACGATCTAAATGTGCGTAGTGTTGAGTACGGCTTTAGATACCACCAACGTTTCAGGAGAGCTTGA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)