Protein

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Genbank accession
XYH45468.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAQAPRTTVTYPLDGANRDFQIPFEYLARKFVQVTLVGVDRKVLVLNIDYRFTQRTIITLTKNWGPSDGYQLVEIRRYTSATERLVDFSDGSILRAYDLNTSQVQSLHIAEEGRDIATDTIGVNNEGHLDARGRKIVNVADGTGDFDVVNLRQVKGWGDSALNQANRAQREADRSQQQADRSTTEANRSRDEANRSTGQASRAEGEANRSTQQADRSKGEADRATGQANLATSNGAAQVQLAKDQVGLATQEANRATQQANLATTNGAAQVKLAADEVTKAKTEVVRASAQADRSTNKATASSGFADAAEASNKSAKAQADRSKSEADRAKSEADKLGNMNNLGGAIEDIHEQKVIWKGEQVTRHSFTSATDGEANFRFQNQDGSGGLRFVRISKANRDVHLYDDNTSSARMTWGTGVTYNNGAFKVTSGGLDVTGATDLRGNTTVSGSIRATGEITCPDTIRAGSTVAAQIEGDDAGNVHFWLRSKDGAERGLVYGDKGKQLHIRANSQPDTFLIKANGQVDVGHQMATRGGLENTGRIASYRNGVGANANMYANCHYMAQTDDGSPPAYGFHRGGSYALALWLNGQELHIMDSSGTNRALLTNVSGQKKFPFQAGRIGIGAPGGGYRQFRVNFHKPMANAVVQLTMHRPNLHQGVGARGEMWTDGIDANGFTFWAHCEGGAQWDAHVDWIATVSVETIS
Physico‐chemical
properties
protein length:701 AA
molecular weight: 75610,21820 Da
isoelectric point:7,29667
aromaticity:0,06562
hydropathy:-0,61455

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil Coil
DC_0657
STR
1–697
DC_0657
IPR011049
STR
115–156
IPR011049
XYH45468.1
1 701
Architecture
ATT
STR
ATT 1-131 | STR 132-697 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYH45468.1
1 701
Domain Start End Length (AA) Confidence
N-terminal 1 348 348 0,9931
Central domain 349 547 200 0,2571
C-terminal 548 701 153 0,9882
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-348
Central
349-547
C-terminal
548-701

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Inox
[NCBI] 		3395521 Viruses >
Host Pseudomonas syringae pv. tomato str. DC3000
[NCBI] 		223283 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas syringae group genomosp. 3

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYH45468.1 [NCBI]
Genbank nucleotide accession
PV037722.1 [NCBI]
CDS location
range 21977 -> 24082
strand +
CDS
ATGGCTCAAGCACCACGTACCACGGTGACGTACCCACTTGACGGTGCGAATCGAGACTTTCAGATCCCCTTCGAATACCTTGCCCGGAAGTTCGTGCAGGTAACACTCGTGGGTGTAGATCGTAAAGTCCTTGTCCTGAATATCGACTACCGGTTCACGCAACGAACCATCATCACCCTGACCAAGAACTGGGGTCCGTCAGACGGCTACCAACTGGTAGAGATCCGTCGATACACCTCGGCTACTGAACGGCTGGTGGACTTCTCTGACGGCTCCATCCTGCGTGCCTATGACCTGAACACCTCTCAGGTTCAATCGCTTCACATTGCTGAAGAAGGCCGTGACATCGCAACCGACACTATCGGTGTGAACAACGAAGGTCACCTCGACGCTCGTGGTCGTAAGATCGTGAACGTGGCGGATGGTACTGGTGACTTCGATGTCGTTAACCTGCGCCAAGTCAAGGGCTGGGGCGACTCAGCATTGAACCAAGCCAACCGGGCACAGCGTGAAGCTGACCGCTCGCAACAACAGGCGGATCGCTCGACCACTGAAGCCAACCGCTCCCGTGATGAAGCCAACCGCTCTACTGGTCAAGCCAGTCGTGCCGAAGGTGAAGCCAACCGCTCCACGCAACAGGCTGACCGCTCTAAAGGCGAAGCTGATCGTGCAACCGGCCAAGCGAACCTCGCCACATCTAACGGTGCAGCTCAGGTACAACTCGCTAAGGACCAAGTAGGTCTCGCCACTCAGGAAGCCAACCGTGCGACCCAACAGGCGAACCTTGCGACGACTAATGGTGCCGCTCAGGTCAAACTGGCTGCCGATGAAGTCACCAAGGCGAAGACTGAGGTCGTTCGTGCATCCGCTCAGGCCGACCGCTCGACGAACAAGGCGACTGCATCCTCTGGGTTTGCTGATGCTGCTGAGGCGAGCAACAAATCGGCCAAGGCTCAGGCTGACCGCTCCAAGAGCGAAGCTGACCGTGCGAAGTCTGAGGCGGATAAGCTGGGCAACATGAACAACCTTGGAGGTGCCATTGAGGACATCCATGAGCAGAAGGTAATCTGGAAGGGTGAGCAAGTGACCCGGCACAGTTTCACATCTGCTACGGATGGTGAGGCCAACTTCAGGTTCCAGAACCAAGACGGCTCAGGAGGTCTACGCTTCGTTCGAATCTCCAAGGCCAACCGTGATGTCCACCTCTACGACGACAATACGTCCAGCGCACGGATGACTTGGGGGACCGGCGTGACGTACAACAACGGAGCCTTTAAGGTCACCTCTGGCGGTCTGGATGTCACTGGCGCTACGGACCTTCGAGGCAACACTACGGTGTCCGGCTCTATCCGTGCAACCGGTGAGATCACCTGTCCCGACACTATCCGGGCAGGCAGTACAGTCGCTGCACAGATCGAAGGTGATGATGCCGGGAACGTCCACTTCTGGCTACGGTCGAAGGATGGCGCTGAGCGTGGTCTCGTATACGGTGACAAAGGAAAGCAGTTGCACATCCGTGCGAACAGCCAGCCCGATACGTTCCTCATTAAGGCGAACGGTCAGGTTGACGTTGGGCACCAGATGGCGACCCGTGGTGGCTTGGAGAACACCGGTCGAATCGCCTCCTACCGCAACGGTGTCGGAGCGAACGCAAACATGTACGCAAACTGCCACTACATGGCCCAGACGGATGATGGATCGCCTCCAGCTTACGGATTCCACCGTGGCGGCTCCTACGCTCTTGCGTTGTGGCTTAACGGTCAAGAGCTGCACATCATGGATTCGTCGGGTACGAACCGCGCCCTGCTGACCAACGTGTCCGGCCAGAAGAAGTTCCCGTTCCAAGCTGGCCGCATTGGTATTGGTGCGCCGGGTGGTGGTTACCGCCAGTTCCGGGTAAACTTCCACAAGCCAATGGCGAACGCCGTTGTCCAGTTGACGATGCACCGGCCAAACCTCCATCAGGGTGTGGGGGCGCGTGGTGAAATGTGGACAGATGGTATCGACGCCAACGGCTTCACCTTCTGGGCACACTGCGAAGGTGGCGCACAGTGGGATGCTCACGTGGATTGGATTGCAACTGTCTCTGTGGAGACCATTAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f97d8c383d69bdca66156cd0abe2df3ae9dc91b5d1c6b88c7abf9f7367f3e99b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7121
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50