Phage RBP Database

Genbank accession

WCF59163.1 [GenBank]

Protein name

hypothetical protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,95

Protein sequence

MALYREGKAAMAADGTVTGTGTKWQSSLSLIRPGATIMFLSSPIQIAVVNKVVSDTEIKAITTNGAVVASTDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIADAVEFFKDFDFESLQNLANQIKADSEAAESSATAAAASENAAKSSENAAKNSEVAAENARDQVQQIINDAGEQSTLVALAQPDGAKNIGKCSSIAQLRNVEPNSAGQRILLASYKADGTADGGGEFYYDPTDSTTADDGASCIVTSGGKRWKAIINPAVKSSTFASSVNINAYLAKKGVNLQFDNALTPTGTINVQSNTRIEFSGNGEIDAPSTLIQGITIAGAAPTTFYNLSADALSGAYQVAIATDQFAVGDWIEIRSEDLVKGPNAKGVKQAQLRRVVKKETSGGQYVYSLDRVLEYDFLVASTARCGKATVIENVVLDSPRLNNINYLNQFGIGINCNYVVNLRIINPILIGSKDKFFIENDAGTGVAGRSAIKLNNCRDVTIDAPVCHHQGWYGVEVLGCSEDIKINDGDFNDCRHGVSVNWSMPYGEPRTVIFNRCVSSNATKAAFDTHDVGVDIKFIDCRAIKSQGDGFQYRARNVKYIRCYAAYCLSNGFDGAQGATGSEFKDCVAEFNKAAGFNIAFEPGTVRNCRAYGNMVGVGAMGGKILGGELEGNSLAAIDYGTGLTGVAAQSALEVTGVKMPFSDGTTTKAQPRAIYFRGAKAVDPSLATIRDCDINGYGNNWALLSSYSSQPSLPVMSGNKLDATGIVGTVTLVAGTATVPTASARKRETTNVNELSTVSKIKLTRLTYQSATPLGDLYVSQINNGVSFTIMSTSNSDVSKVMWEISL

Physico‐chemical properties

protein length:	838 AA
molecular weight:	88841,50880 Da
isoelectric point:	5,15327
aromaticity:	0,07518
hydropathy:	-0,11265

Domain architecture

WCF59163.1

1 838 aa

STR 295–795 · ENZ 796–836 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil IPR011050 IPR056204

IPR057095
ENZ

IPR057095 IPR011050

IPR012334
STR

IPR012334

WCF59163.1

1838 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1200
STR

DC_1200

DC_1484
STR

DC_1484

WCF59163.1

1838 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	147	174	Coils	Coil	-	-	-	-
IPR011050	STR	IPR011050	295	574	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR057095	ENZ	DC_0534	334	419	InterPro cluster	K1 capsule-specific polysaccharide lyase, rider domain	Central	High	Text match	77 proteins / 77 hits
IPR011050	STR	IPR011050	543	672	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR012334	STR	IPR012334	557	795	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR056204	ENZ	DC_0206	757	836	InterPro cluster	K1 capsule-specific polysaccharide lyase, C-terminal domain	C-terminal	High	Text match	97 proteins / 97 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

WCF59163.1

1 838 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	271	271	0,9953
Central domain	272	755	485	0,9947
C-terminal	756	838	82	0,9843

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Klebsiella phage vB_LZ2044 [NCBI] · taxon 2996108

No lineage information

Host

Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 [NCBI] · taxon 484021

Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Klebsiella

Genbank protein accession

WCF59163.1 [NCBI]

Genbank nucleotide accession

OP785155 [NCBI]

CDS location

range 10889 -> 13405
strand -

CDS

ATGGCACTATACAGAGAAGGCAAGGCGGCTATGGCCGCAGACGGAACAGTTACCGGAACTGGAACAAAATGGCAATCATCGCTTTCGCTGATTCGCCCTGGCGCGACGATTATGTTTTTGTCGTCACCAATTCAAATAGCTGTAGTAAACAAGGTGGTCAGTGACACTGAAATTAAAGCAATTACCACAAACGGCGCTGTCGTAGCGTCTACTGACTACGCGATCCTGTTAAGCGACTCGCTGACCGTTGACGGCCTGGCGCAAGATGTTGCTGAAACTCTGCGCTACTATCAGTCGCAGGAAACCGTGATTGCGGATGCAGTTGAGTTCTTTAAGGATTTTGATTTCGAATCTCTTCAAAATCTTGCCAACCAAATTAAGGCAGACTCTGAAGCTGCGGAATCAAGTGCTACGGCGGCTGCCGCTTCTGAAAACGCGGCAAAATCTTCTGAAAATGCGGCAAAAAATTCAGAGGTAGCAGCGGAGAATGCAAGAGACCAAGTACAGCAGATCATCAACGACGCTGGCGAACAGTCAACGCTGGTGGCGCTGGCGCAGCCTGATGGGGCAAAAAACATAGGCAAGTGCTCAAGCATAGCACAGTTACGAAATGTTGAACCAAACAGCGCGGGACAGAGAATCTTGCTGGCATCATACAAAGCAGACGGAACTGCTGATGGAGGCGGCGAATTTTACTATGATCCGACAGATTCCACCACGGCTGACGATGGTGCATCATGCATTGTTACCAGTGGCGGCAAAAGGTGGAAGGCAATTATAAATCCGGCAGTCAAAAGTTCGACGTTTGCATCTAGCGTAAATATTAACGCCTATCTCGCAAAGAAAGGCGTCAACTTGCAATTCGACAATGCACTAACGCCGACCGGAACAATCAACGTTCAGAGCAACACACGTATTGAATTCTCCGGCAATGGCGAAATTGACGCTCCGAGCACGCTGATTCAAGGAATTACAATCGCAGGTGCCGCCCCGACGACCTTCTATAACCTGTCAGCTGATGCCCTATCAGGCGCTTACCAGGTAGCCATAGCTACCGACCAGTTCGCTGTCGGTGACTGGATCGAAATTCGCTCTGAAGATCTTGTTAAGGGGCCAAACGCGAAGGGCGTTAAGCAGGCGCAGTTACGGCGCGTGGTGAAAAAGGAAACGTCTGGCGGTCAGTATGTGTACTCACTAGACAGAGTTCTTGAATACGATTTTCTCGTCGCTAGCACGGCGAGGTGCGGCAAGGCTACCGTGATAGAGAACGTGGTTCTTGATAGCCCGCGACTGAACAATATCAACTATCTGAATCAGTTCGGAATTGGGATAAACTGCAACTATGTGGTCAATCTTAGAATCATTAATCCGATTCTTATTGGCTCAAAGGATAAGTTCTTCATTGAAAACGACGCAGGAACTGGTGTTGCAGGACGAAGCGCGATCAAACTGAACAATTGCCGTGACGTGACCATAGACGCCCCGGTGTGCCACCATCAGGGTTGGTATGGTGTTGAAGTTCTTGGATGCAGCGAAGATATTAAAATAAACGATGGGGATTTCAATGATTGCCGACACGGCGTTTCGGTTAACTGGTCAATGCCATACGGTGAACCGAGAACAGTAATATTCAATAGATGTGTTTCAAGCAATGCAACAAAGGCGGCATTTGACACGCACGATGTTGGGGTTGATATTAAATTCATAGATTGCCGTGCAATAAAATCCCAGGGCGATGGTTTCCAGTATCGCGCCCGGAACGTGAAATACATCCGTTGTTATGCTGCATACTGCCTGTCCAACGGTTTCGACGGCGCACAAGGTGCAACAGGTTCTGAATTTAAAGACTGCGTTGCAGAATTCAACAAAGCGGCCGGTTTCAATATCGCATTCGAACCTGGAACCGTGCGGAACTGCCGAGCCTACGGAAACATGGTTGGTGTCGGTGCAATGGGAGGAAAGATACTTGGTGGCGAACTGGAAGGAAACTCACTGGCGGCCATCGACTACGGAACCGGACTAACCGGTGTTGCCGCGCAGTCAGCGCTTGAAGTTACTGGTGTCAAGATGCCGTTCAGTGACGGCACGACAACGAAAGCGCAGCCAAGAGCAATCTATTTCCGTGGCGCAAAAGCGGTTGACCCATCCCTAGCCACGATCCGCGATTGTGACATCAACGGGTATGGCAACAATTGGGCATTGCTATCGTCTTATTCTTCTCAGCCATCACTCCCGGTGATGTCTGGAAATAAGCTGGATGCGACTGGCATTGTCGGCACGGTAACGCTTGTTGCAGGTACAGCTACGGTGCCAACAGCGAGCGCGAGAAAACGCGAAACAACGAACGTCAATGAGCTTTCAACGGTTAGTAAGATCAAGCTGACCAGGCTTACTTACCAGTCGGCCACGCCGCTTGGTGACCTTTACGTGTCACAAATAAACAACGGCGTTTCGTTTACTATTATGTCTACATCAAATTCGGATGTTTCGAAAGTTATGTGGGAAATATCCCTGTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)