Protein

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Genbank accession
XYM57905.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,31
Seq2Symm
I confidence 0,566 truncated
I 0,566
C1 0,246
C2 0,003
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MARKTILSNYYLFDASERQVVIPGGVQREQLILITNVTDNKVIYNFSDPELTATAYTIATDIRNVTTTRVTLAYDTTTMSDTDKLQIIVDDFEERIEPAEAYHDSVNKMRVSNPQSQIDTDFEYGTQGTKWESLTMINNNPFAYKSEDVIAITEIQAGANSNNLREFEVSAASPPAAGSAIYVQDTTFPGANGVFIVDSADSTSFKYTGTYEWTAGQTNIYDSARTAVYQGIHYTNSSIGGTITLASGSGSMSGSVQVTTSQAHGLEVGNEIAVAGSNGSNVNGSWVVARVQDPNTFFYFPTAAPSGGVASGTIKLYPRPQGSSVHRAFDGGVKFSTNSHSKNQQAIRQTKRYFRYQSGKGVSFSTGSILEPAIENLDSITASGTTVTVVSAVAHNVTRSAVIDVRGVGDNTYNGQYEVTNVVDPYTFEYTVPVAPTETEATGEYTVTPVGGYGTKLEIGMMDQQNGLFFRYASGNLSVVRRTSTYQLSGKVTVTNGNTLVSSYTGPNLQGTKFSKQLKPGDYVVIRGSSYRVDGIISDTQMVIFPDYRGPSAGNVPVTKTVETEWNQADWNLDRCDGTGKTGYTIDPTRMQMFYMDYSWYGAGFIRWGFRAEDGNIIYAHKIPNNNANTEAYMRSGNLPARYEVNTLPPNTTSTKTIGSGDSSLYVAQAPSHFPDSGTLRIRQTTGATTGTQEYVNYTGKTVFAQDVIATTSGNNLIQVSSTAGLAGGGIQTVTFDTPFANVAANKVYYVVSTTTGGFTISEQSGPSAVAKTLTSQTGSALSPLSRASSGVFTGVTREQAGATSVTLTIASGASQGTVSNASGIQKGQYVIGDGIPSDTIVHSISGTTIQLSKAVFSANPTGVIFSPLGSAAAQTFTYSATQPISVELVGSTSVPQISHWGSSVIMEGLYDDDRAYVYTVGTRTGREINSGDTKALLAIRTSPSVDNGIPGAFGTRELINRMQLVLRTAEVSANGPFFVELVLNPNITNSVNWINVGGTSLAQYADLTQGAATVTNELVGGEVIYGFYADSGVADYDLGRVKEISNSILGGGGDQLAATTAPNPTGVFPDGPEVLAVKVTNIGGGRGSNRRAVDFRISWTEAQA
Physico‐chemical
properties
protein length:1105 AA
molecular weight: 117507,49970 Da
isoelectric point:5,09888
aromaticity:0,09050
hydropathy:-0,22045

Taxonomy

Phage
Synechococcus phage Sf-CH3 [NCBI] · taxon 3413214
Synechococcus phage Sf-CH3
Host
Synechococcus [NCBI] · taxon 1129
Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus

Coding sequence (CDS)

Genbank protein accession
XYM57905.1 [NCBI]
Genbank nucleotide accession
PV340851 [NCBI]
CDS location
range 178924 -> 182241
strand -
CDS
ATGGCAAGAAAAACTATCCTAAGTAATTATTATCTGTTTGATGCTTCGGAAAGACAGGTAGTGATTCCTGGTGGTGTTCAAAGAGAGCAGTTGATTCTAATTACCAACGTTACTGATAACAAAGTTATCTACAACTTCTCGGATCCAGAACTAACTGCGACAGCATACACCATCGCTACTGATATCCGAAACGTTACTACGACTAGGGTAACCCTAGCGTATGACACTACAACGATGTCTGACACAGACAAGTTGCAGATTATTGTGGATGACTTTGAGGAAAGAATTGAACCTGCCGAAGCATATCATGACTCCGTAAACAAGATGAGGGTGTCTAACCCTCAGTCACAGATTGATACTGACTTTGAGTATGGTACTCAGGGTACGAAGTGGGAATCGTTGACGATGATCAACAACAACCCATTTGCATATAAGTCTGAGGATGTAATTGCCATTACAGAAATTCAAGCTGGTGCTAACAGTAATAACCTGAGAGAGTTTGAAGTTTCTGCAGCAAGTCCACCAGCAGCAGGTAGTGCTATCTACGTACAAGATACTACCTTCCCTGGTGCTAACGGTGTCTTCATTGTTGATAGTGCAGACTCCACATCATTCAAGTATACTGGTACATACGAGTGGACTGCAGGTCAAACTAACATCTATGACTCTGCTAGAACTGCTGTATATCAGGGCATTCACTACACGAATTCTTCTATTGGTGGCACAATTACACTAGCATCTGGTAGTGGTAGTATGTCTGGTTCTGTTCAAGTAACTACATCACAAGCACACGGTCTAGAAGTTGGTAATGAAATCGCAGTTGCTGGATCTAATGGTTCTAACGTTAATGGATCTTGGGTTGTTGCTAGAGTACAGGATCCAAACACATTCTTCTACTTCCCAACTGCTGCTCCTAGTGGTGGTGTTGCATCTGGTACTATCAAACTATACCCAAGACCACAAGGTTCTTCTGTACACAGAGCATTTGATGGTGGTGTTAAGTTCTCTACTAACTCACACTCTAAAAACCAACAGGCAATCAGACAGACCAAACGTTACTTCCGTTATCAGTCTGGTAAAGGCGTATCATTCTCAACTGGTTCTATCCTAGAACCTGCTATCGAAAACTTAGATAGCATCACTGCATCTGGTACAACTGTAACTGTTGTATCTGCTGTTGCTCACAACGTAACTAGAAGTGCAGTTATTGATGTCCGTGGTGTTGGTGATAACACATACAACGGACAGTATGAGGTAACCAACGTTGTTGATCCATATACTTTTGAGTATACAGTACCTGTTGCTCCAACTGAAACTGAAGCGACAGGTGAGTACACTGTAACTCCTGTCGGTGGTTATGGTACTAAACTAGAGATCGGTATGATGGACCAACAAAATGGTCTGTTCTTCCGTTATGCTAGTGGCAACCTCAGTGTTGTTCGTAGAACTTCTACCTATCAGTTGTCTGGTAAGGTCACAGTAACCAACGGCAACACCCTAGTTTCTAGTTACACTGGTCCTAACCTACAGGGCACTAAGTTCTCCAAGCAACTGAAGCCTGGTGACTATGTTGTCATCCGTGGTTCTTCTTACCGTGTTGATGGTATCATCTCTGATACTCAAATGGTTATCTTCCCTGATTATCGTGGACCATCCGCAGGTAACGTACCAGTCACCAAGACTGTAGAAACAGAATGGAATCAGGCAGACTGGAACTTGGACCGTTGTGATGGAACTGGTAAAACTGGTTACACGATTGACCCAACCAGAATGCAGATGTTCTATATGGACTACTCCTGGTATGGTGCTGGTTTCATCCGCTGGGGTTTCCGTGCAGAAGATGGTAACATCATCTACGCTCACAAGATTCCTAACAACAATGCTAACACTGAAGCATACATGAGATCAGGTAACCTGCCTGCTCGTTATGAAGTTAATACACTGCCACCTAATACCACATCGACTAAGACTATTGGTAGTGGTGACAGCAGTCTTTATGTTGCTCAAGCACCTTCTCACTTCCCTGACTCTGGCACTCTAAGAATCAGACAGACAACAGGTGCAACAACAGGCACACAAGAATATGTAAACTATACAGGTAAGACAGTCTTTGCTCAAGACGTTATTGCTACAACTTCTGGTAACAACCTGATTCAAGTTTCTAGCACTGCTGGTCTAGCAGGTGGTGGCATTCAGACTGTCACATTTGACACTCCCTTTGCTAACGTTGCTGCTAACAAAGTATACTACGTTGTAAGTACAACCACAGGTGGTTTCACAATCTCCGAACAGAGTGGTCCTTCTGCTGTTGCAAAGACCTTGACCAGTCAGACAGGTTCTGCACTATCTCCACTGTCCCGTGCCTCCTCAGGCGTCTTCACGGGCGTGACTAGAGAACAGGCAGGTGCTACCAGTGTCACCCTCACAATCGCTTCTGGTGCGTCTCAGGGCACAGTAAGTAATGCTTCTGGTATCCAGAAAGGTCAGTATGTAATTGGCGATGGCATTCCTTCTGATACTATTGTCCACAGCATTAGTGGAACAACCATTCAGTTGAGCAAAGCAGTGTTCTCTGCTAACCCAACTGGTGTTATCTTCTCACCTCTTGGATCTGCAGCAGCACAGACATTTACTTACAGTGCAACACAACCAATTAGTGTTGAACTAGTAGGTTCTACATCTGTTCCACAGATTAGTCACTGGGGTTCATCGGTCATCATGGAAGGTCTATACGACGATGACCGAGCATATGTATACACGGTCGGAACCAGAACTGGTCGTGAGATTAACTCTGGCGACACGAAAGCGTTGCTTGCTATTCGTACATCACCTTCTGTTGATAACGGTATCCCTGGTGCATTCGGTACTAGAGAACTGATCAATAGAATGCAGTTGGTTCTTAGAACTGCAGAGGTGTCGGCGAACGGTCCTTTCTTTGTAGAACTAGTATTGAATCCAAACATTACTAACTCTGTCAACTGGATCAACGTTGGTGGTACATCACTAGCACAGTATGCAGACCTAACACAGGGTGCAGCAACTGTTACGAACGAACTGGTTGGTGGTGAAGTTATCTACGGTTTCTACGCTGACTCTGGTGTTGCTGACTATGACCTAGGACGAGTGAAAGAAATTTCCAACTCTATCCTTGGTGGTGGTGGCGATCAACTCGCTGCAACTACAGCACCCAATCCAACAGGTGTCTTCCCTGATGGTCCTGAAGTTCTAGCGGTTAAAGTAACGAACATCGGTGGTGGTCGTGGTTCAAACAGGAGAGCGGTTGACTTCCGTATTTCCTGGACGGAAGCACAGGCATAA

Genome Context

Tertiary structure

XYM57905.1
ESMFold2 structure
Source ESMFold2
pLDDT 74.9
Oligomeric state monomer
Download structure