Protein

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Genbank accession
YP_224261.1 [GenBank]
Protein name
putative hemagglutinin protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTIPKLTPYTGQVANPDGSQTQTEFTTNMFNQLSYEANLATELDATIDGINNAVDEVSQNTAIAESSANAAEAAASSAGYKGLWPDTGGSANKGDTYQTQVGGTPTGEYFTALQNTTVDPVGDNVNWKVNVSVSSLIQPRYEADSVELALDSITSSGKVIEAKIGDKWNVKGVDFIRVAVGTDRSALLIDSNETVTNALRVSNRRTVKEFSTEEIKSKAESSHLLTIAGPSSKLQFSRLTVPVDSANDLEFYIDANLSTPLNNSTSSTNFYLVGVACDDVLRSGAVNKPIGTIETTDRGYKLTVPSSDLTSTHFSLDLRLNTGADASGEITSIVAKQQGVKVGDTLYNLIRQSDEWTADNRNTSFAEPSGSFLSGQDIDRGMSSITSNNVLSVSKSGLNSYLSKRTSLEFYNDVIQNESSPVLVKALAMDSGDYYPYRQQFALNVLGDVALIAQGGAVNIMCGDEIAPTFVSSSGGVDYYTAPWDDDRHYNDDVRSGAAQPRLSAEMVNSTESVYKYQLTPTTSIVSVQSTPNTSYYDSGTGTVHLSYPAGYIPPKIYVTCTSNGVNEYNPGGSTPSFDIFGFNINIYAAESNNWFIRPSNYAPYPTVSSKFVSLHSCSGIASGAGEGIFIGNVDYDLVDCTFNSNGNDGFNHHFSGLGYVEGGRGWNNSQDGMSHHEQQIAYCKGVSLNYSGAANCVPAFGCDVYMYRCESVTASDGLTTKVYAGTFCALSSQSQGNAKAVYDSCYTDNTLNRSIGGYLSSSLDATSVSTVVVKNPISNLDGAKLTDKTGNADNVMLIIP
Physico‐chemical
properties
protein length:801 AA
molecular weight: 85564,00490 Da
isoelectric point:4,56124
aromaticity:0,08864
hydropathy:-0,28614

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_224261.1
1 801 aa
Domain Start End Length (AA) Confidence
N-terminal 1 380 380 0,5510
Central domain 381 785 406 0,9179
C-terminal 786 801 15 0,6042
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Listonella phage phiHSIC [NCBI] · taxon 310539
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Listonella pelagia [NCBI] · taxon 28169
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Coding sequence (CDS)

Genbank protein accession
YP_224261.1 [NCBI]
Genbank nucleotide accession
NC_006953 [NCBI]
CDS location
range 21870 -> 24275
strand +
CDS
ATGACCATTCCAAAGTTAACACCATACACCGGACAAGTAGCAAATCCAGACGGTAGCCAAACTCAAACAGAGTTTACTACCAATATGTTTAATCAGCTCAGTTATGAAGCAAATTTAGCAACAGAGTTAGACGCTACAATTGACGGAATCAATAACGCTGTCGATGAGGTAAGCCAGAATACCGCTATCGCTGAAAGCTCAGCCAATGCAGCGGAAGCGGCTGCATCGTCGGCGGGCTACAAAGGCTTATGGCCCGACACAGGCGGCAGTGCTAATAAGGGCGATACATATCAAACTCAAGTTGGTGGAACACCGACTGGTGAATATTTCACCGCCTTGCAAAATACGACCGTTGACCCTGTAGGGGATAACGTTAATTGGAAGGTTAATGTTAGTGTAAGCAGTTTAATACAGCCAAGATATGAAGCGGACAGTGTAGAGCTTGCGCTGGATTCTATCACGTCATCTGGAAAGGTTATTGAAGCAAAAATTGGAGATAAGTGGAATGTAAAGGGTGTTGATTTTATCCGCGTTGCCGTCGGCACAGATAGATCTGCGCTTTTGATTGACTCTAATGAGACTGTTACAAATGCGCTCAGAGTTTCAAATAGACGCACGGTTAAGGAGTTTTCAACCGAAGAGATTAAATCAAAAGCAGAAAGTAGTCACTTACTGACGATTGCAGGCCCATCGTCTAAGTTGCAATTCTCTCGACTTACTGTACCAGTAGACTCAGCAAATGATTTGGAGTTTTACATTGACGCAAATCTAAGTACACCACTTAATAACTCAACAAGTTCAACAAACTTCTACCTAGTAGGCGTTGCTTGTGATGATGTATTGCGTAGCGGCGCGGTAAATAAACCTATAGGTACAATCGAGACAACCGACCGTGGTTACAAACTGACAGTCCCATCCTCAGACCTAACTAGTACGCACTTTTCTCTGGATTTAAGATTAAACACTGGCGCAGACGCTAGCGGTGAGATTACTTCAATTGTAGCAAAGCAGCAAGGTGTGAAAGTCGGTGATACTCTTTACAATTTGATTCGTCAATCAGATGAGTGGACAGCTGACAATAGAAATACATCTTTCGCAGAGCCTTCTGGGTCATTCCTCAGCGGACAAGATATTGACAGAGGGATGTCATCCATAACCTCTAACAATGTGCTAAGCGTAAGCAAAAGCGGTCTTAACTCTTACTTATCAAAGCGAACTAGCCTAGAGTTTTACAATGATGTAATTCAAAACGAATCATCTCCGGTTCTTGTTAAAGCACTCGCAATGGATAGTGGCGATTACTACCCTTACCGCCAACAGTTTGCTTTAAACGTCCTTGGTGATGTTGCGCTAATCGCTCAAGGCGGAGCGGTAAACATCATGTGTGGAGATGAGATAGCACCTACGTTTGTATCCAGCTCTGGCGGTGTAGATTACTACACAGCGCCTTGGGATGATGACAGACATTATAATGATGACGTAAGAAGCGGAGCAGCTCAGCCTCGCTTGTCTGCCGAGATGGTAAACTCTACTGAGTCTGTTTATAAGTACCAGCTAACACCTACCACGTCGATAGTTAGCGTACAAAGCACGCCTAACACTAGTTATTATGATAGTGGGACTGGCACAGTGCACTTGAGCTATCCAGCAGGATACATTCCGCCTAAAATCTACGTGACTTGCACAAGTAACGGTGTTAACGAATACAATCCGGGAGGTTCTACACCATCTTTTGATATCTTCGGCTTTAACATCAATATCTATGCAGCGGAGAGTAACAACTGGTTTATACGCCCATCAAATTACGCTCCATACCCTACGGTATCATCAAAGTTTGTATCTCTTCATTCGTGCTCAGGGATTGCGTCTGGTGCTGGGGAAGGGATTTTCATAGGCAACGTTGATTACGATCTTGTGGATTGCACTTTTAACAGTAATGGTAATGACGGATTTAACCATCACTTTAGCGGACTTGGCTACGTTGAAGGGGGTAGAGGTTGGAATAACTCACAGGATGGGATGAGTCACCATGAGCAACAAATAGCCTACTGTAAGGGAGTTTCACTAAACTACAGCGGTGCAGCGAACTGCGTACCTGCTTTTGGGTGTGATGTGTACATGTACAGATGTGAAAGCGTTACAGCTTCAGACGGATTAACAACTAAAGTTTACGCTGGTACATTCTGCGCTTTATCAAGCCAGTCTCAAGGTAATGCAAAGGCTGTTTATGACAGTTGTTACACGGATAACACCTTAAACAGGTCTATTGGTGGGTATCTTAGCTCATCCCTTGATGCTACGAGCGTGTCAACGGTTGTTGTTAAAAATCCAATATCAAACCTTGATGGGGCCAAGCTAACCGACAAAACAGGCAATGCTGACAACGTAATGCTGATTATACCCTAG

Genome Context

Tertiary structure

YP_224261.1
ESMFold structure
Source ESMFold
pLDDT 65.9
Oligomeric state monomer
Download structure