Protein

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Genbank accession
AMR58248.1 [GenBank]
Protein name
pre-neck appendage preprotein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MQKPELRRFEKLGEMMVQVYERYLPTAFDESMTLLEKMNKIIEYLNQIGRLTNDVVEEWNKVMEWILNDGLEDYVKETLEKWYEEGKFADLVIQVIDELKQFGVSVKTYGAVGDGKTDDIEAFEKAIASGYPVYIPNGKFAVSRSIKIPSNTVITGAGIDNAVVTFLDSVPLGDSLMINDNYATGNENIYLSDFTLDGNCQRFGVNAIGSGGSRDSNLSIHASKNVHIDRIKSINATLHGIDITCGGLDYPYMGDGTTAPYPSRDIYISDCEAAFFGDDGITTHHSEYITISNCNCHDPRLLDNCNGIEIDDGSRHVQLSNNTTKNCFGGVEIKAHGNVPAAYNVSINGHMSIGDVRSYNFRHIGHHSATDPESLSAKNIICNNLISVNPNNKRGFQNNASPRVLAVSAYYGVVINGLSAYTDEPSNLTETAISVQFRARNVSLSGIVMTGFSMAENAIYVIGGSRGGDSVNISNVTLNNSGRNGVAIGSGIDNVSITNVSAIGGGVVNPIAIVKTVNSNPQISGVNGIGYPVVCQVAGINYNDGLTLFNGAFRAATSSSEYIHSEGFVLGGTSKSGATASKSGVVASSSSIANAERSLISGSAGCVTNGSYNTILGSLNCETTNTGNLISTSSASKATGNRNIVLASYGVLASGSYKVNGGYGGEGTPSATNIKWELDSLNGNIKAANAVTGANTWSDYGEYFETVDGQAIETGYLVTLEGGKIRKAQEGEKIIGAISETAGVVLGESTWNWQGQYMKNEFGGLIYETVEIDDGVFEKMPKVNPSYNPELEYMSRGERPEWNIVGLVGQIMVRIDDTVKIGNGISAKDGIATDGDTGIVMEITTPYEPSKGYGVAKVLLK
Physico‐chemical
properties
protein length:861 AA
molecular weight: 91982,54980 Da
isoelectric point:4,89551
aromaticity:0,07782
hydropathy:-0,18664

Domains

Domains [InterPro]
IPR012334
STR
83–550
IPR012334 G3DSA:2.160.10.20 G3DSA:2.40.300.10
IPR011050
STR
102–396
IPR011050 IPR006626 IPR006626 DC_1692 IPR021865
IPR024535
ENZ
104–331
IPR024535 IPR006626 G3DSA:4.10.80.40
IPR006626
Unmapped
186–212
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
AMR58248.1
1 861
Architecture
STR
RBD
STR
RBD
STR 83-550 | RBD 551-574 | STR 575-630 | RBD 631-861
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AMR58248.1
1 861
Domain Start End Length (AA) Confidence
N-terminal 1 116 116 0,9869
Central domain 117 657 542 0,9775
C-terminal 658 861 203 0,9072
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-116
Central
117-657
C-terminal
658-861

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage vB_BsuP-Goe1
[NCBI] 		1807511 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus subtilis
[NCBI] 		1423 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMR58248.1 [NCBI]
Genbank nucleotide accession
KU831549 [NCBI]
CDS location
range 10958 -> 13543
strand +
CDS
ATGCAGAAACCTGAGTTAAGACGTTTTGAAAAGTTGGGAGAAATGATGGTGCAAGTTTACGAACGCTATCTCCCTACTGCTTTTGATGAAAGTATGACCTTGTTAGAGAAAATGAATAAGATCATTGAGTACCTCAATCAGATTGGTCGCTTAACCAATGATGTTGTCGAGGAATGGAACAAGGTTATGGAATGGATTCTCAATGACGGTTTAGAAGACTACGTTAAAGAGACACTTGAGAAGTGGTATGAAGAAGGAAAATTTGCCGATCTTGTTATTCAGGTGATAGACGAATTAAAACAGTTTGGCGTTAGTGTTAAAACATATGGCGCTGTGGGTGATGGAAAAACAGATGACATTGAAGCGTTTGAAAAAGCCATTGCTTCTGGATACCCTGTTTACATTCCAAATGGTAAATTCGCCGTATCCCGATCAATTAAAATACCATCAAACACAGTTATTACAGGGGCAGGGATTGACAACGCTGTAGTCACATTTCTTGATAGTGTTCCGTTAGGCGATAGCCTTATGATAAACGATAACTACGCAACTGGTAACGAAAATATCTATCTGTCTGATTTCACCCTTGACGGTAACTGTCAGCGCTTTGGTGTAAATGCGATTGGTAGCGGTGGATCACGTGATAGTAACTTGTCAATTCACGCATCTAAAAACGTGCATATTGACCGAATTAAATCTATTAACGCCACACTTCACGGAATTGATATTACATGTGGTGGTCTTGATTATCCTTACATGGGTGACGGGACAACTGCACCGTATCCGTCAAGAGATATTTATATCTCAGATTGTGAAGCCGCCTTCTTCGGTGACGATGGTATCACCACACACCATAGTGAGTATATCACAATCAGCAATTGTAACTGTCATGACCCACGTTTACTTGATAACTGTAACGGCATTGAAATTGATGATGGTTCTAGGCACGTTCAACTATCTAATAACACAACTAAGAATTGTTTTGGTGGCGTTGAAATTAAAGCACACGGAAACGTGCCTGCCGCCTACAACGTTAGCATCAATGGACATATGTCCATTGGAGACGTTCGCTCATACAATTTCCGGCACATTGGACATCATTCAGCAACAGATCCAGAGTCATTGTCGGCGAAAAACATTATCTGTAACAACTTGATCTCTGTTAATCCTAACAATAAACGAGGGTTTCAAAACAATGCATCACCAAGGGTTTTGGCTGTATCAGCGTATTACGGGGTAGTGATTAACGGACTGAGTGCATACACTGATGAACCAAGTAATTTAACAGAAACCGCAATTAGTGTTCAATTTAGAGCGAGAAACGTTAGTCTCTCTGGAATTGTTATGACAGGTTTCAGTATGGCAGAAAACGCAATATATGTAATCGGCGGTAGTCGTGGTGGCGACAGCGTTAATATTTCAAACGTTACATTAAACAACTCAGGAAGAAACGGTGTTGCTATTGGTTCAGGTATTGACAACGTTTCTATCACAAATGTTAGTGCCATCGGTGGCGGTGTTGTGAATCCAATCGCTATTGTGAAAACAGTTAATAGCAATCCACAAATATCTGGTGTGAATGGTATCGGGTATCCAGTTGTGTGTCAAGTTGCTGGAATTAACTACAATGATGGTCTCACACTCTTTAACGGGGCATTCCGTGCGGCAACATCATCGAGTGAATACATTCACAGTGAGGGGTTTGTGTTAGGTGGAACAAGTAAATCAGGGGCAACAGCATCCAAGTCTGGTGTTGTGGCGTCTAGTTCATCTATCGCTAATGCTGAGCGTTCACTAATTTCAGGTAGTGCTGGTTGCGTAACTAATGGCTCTTATAACACAATCCTAGGTTCATTGAACTGTGAAACAACAAACACTGGAAACCTTATTTCAACATCCTCGGCGTCTAAGGCAACCGGAAACCGTAATATTGTTCTTGCAAGTTACGGTGTTCTAGCAAGTGGTTCATACAAAGTAAACGGCGGGTACGGTGGAGAAGGAACACCAAGTGCGACTAACATTAAATGGGAGTTAGATTCACTCAATGGTAACATCAAAGCCGCAAACGCTGTTACTGGAGCGAACACATGGAGTGACTATGGCGAATACTTTGAAACTGTTGATGGGCAAGCCATTGAAACAGGTTATCTTGTTACTCTTGAGGGCGGTAAGATACGGAAAGCACAGGAAGGTGAAAAAATCATCGGTGCTATTTCTGAAACGGCTGGTGTTGTTCTCGGTGAAAGCACATGGAACTGGCAGGGGCAATATATGAAAAATGAGTTTGGTGGGTTAATCTATGAAACTGTGGAAATAGATGATGGTGTATTTGAAAAGATGCCTAAAGTCAATCCATCTTATAACCCTGAACTAGAATACATGTCTCGTGGAGAGAGACCTGAGTGGAACATTGTTGGATTGGTTGGTCAAATCATGGTTCGCATTGATGACACTGTGAAAATTGGCAACGGAATCTCTGCTAAGGATGGAATTGCAACAGACGGTGACACTGGTATTGTTATGGAAATCACAACACCTTATGAACCTAGTAAGGGTTACGGTGTGGCAAAAGTGTTACTGAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
4bd81533134c87276a4fbb9d703788d7c2746c07d536604d4924fff2e4d93529
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7414
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of Bacillus subtilis phage vB_BsuP_Goe1 Hertel,R., Willms,I.M. and Daniel,R. 2016-09-08 — GenBank