Protein

View in Explore
Genbank accession
AMR58248.1 [GenBank]
Protein name
pre-neck appendage preprotein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MQKPELRRFEKLGEMMVQVYERYLPTAFDESMTLLEKMNKIIEYLNQIGRLTNDVVEEWNKVMEWILNDGLEDYVKETLEKWYEEGKFADLVIQVIDELKQFGVSVKTYGAVGDGKTDDIEAFEKAIASGYPVYIPNGKFAVSRSIKIPSNTVITGAGIDNAVVTFLDSVPLGDSLMINDNYATGNENIYLSDFTLDGNCQRFGVNAIGSGGSRDSNLSIHASKNVHIDRIKSINATLHGIDITCGGLDYPYMGDGTTAPYPSRDIYISDCEAAFFGDDGITTHHSEYITISNCNCHDPRLLDNCNGIEIDDGSRHVQLSNNTTKNCFGGVEIKAHGNVPAAYNVSINGHMSIGDVRSYNFRHIGHHSATDPESLSAKNIICNNLISVNPNNKRGFQNNASPRVLAVSAYYGVVINGLSAYTDEPSNLTETAISVQFRARNVSLSGIVMTGFSMAENAIYVIGGSRGGDSVNISNVTLNNSGRNGVAIGSGIDNVSITNVSAIGGGVVNPIAIVKTVNSNPQISGVNGIGYPVVCQVAGINYNDGLTLFNGAFRAATSSSEYIHSEGFVLGGTSKSGATASKSGVVASSSSIANAERSLISGSAGCVTNGSYNTILGSLNCETTNTGNLISTSSASKATGNRNIVLASYGVLASGSYKVNGGYGGEGTPSATNIKWELDSLNGNIKAANAVTGANTWSDYGEYFETVDGQAIETGYLVTLEGGKIRKAQEGEKIIGAISETAGVVLGESTWNWQGQYMKNEFGGLIYETVEIDDGVFEKMPKVNPSYNPELEYMSRGERPEWNIVGLVGQIMVRIDDTVKIGNGISAKDGIATDGDTGIVMEITTPYEPSKGYGVAKVLLK
Physico‐chemical
properties
protein length:861 AA
molecular weight: 91982,54980 Da
isoelectric point:4,89551
aromaticity:0,07782
hydropathy:-0,18664

Domains

View on InterPro
Domain architecture
AMR58248.1
1 861 aa
STR 83–550 · RBD 551–861
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
AMR58248.1
1 861 aa
Domain Start End Length (AA) Confidence
N-terminal 1 116 116 0,9869
Central domain 117 657 542 0,9775
C-terminal 658 861 203 0,9072
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Bacillus phage vB_BsuP-Goe1 [NCBI] · taxon 1807511
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Bacillus subtilis [NCBI] · taxon 1423
cellular organisms Bacteria Bacillati Bacillota Bacilli Bacillales

Coding sequence (CDS)

Genbank protein accession
AMR58248.1 [NCBI]
Genbank nucleotide accession
KU831549 [NCBI]
CDS location
range 10958 -> 13543
strand +
CDS
ATGCAGAAACCTGAGTTAAGACGTTTTGAAAAGTTGGGAGAAATGATGGTGCAAGTTTACGAACGCTATCTCCCTACTGCTTTTGATGAAAGTATGACCTTGTTAGAGAAAATGAATAAGATCATTGAGTACCTCAATCAGATTGGTCGCTTAACCAATGATGTTGTCGAGGAATGGAACAAGGTTATGGAATGGATTCTCAATGACGGTTTAGAAGACTACGTTAAAGAGACACTTGAGAAGTGGTATGAAGAAGGAAAATTTGCCGATCTTGTTATTCAGGTGATAGACGAATTAAAACAGTTTGGCGTTAGTGTTAAAACATATGGCGCTGTGGGTGATGGAAAAACAGATGACATTGAAGCGTTTGAAAAAGCCATTGCTTCTGGATACCCTGTTTACATTCCAAATGGTAAATTCGCCGTATCCCGATCAATTAAAATACCATCAAACACAGTTATTACAGGGGCAGGGATTGACAACGCTGTAGTCACATTTCTTGATAGTGTTCCGTTAGGCGATAGCCTTATGATAAACGATAACTACGCAACTGGTAACGAAAATATCTATCTGTCTGATTTCACCCTTGACGGTAACTGTCAGCGCTTTGGTGTAAATGCGATTGGTAGCGGTGGATCACGTGATAGTAACTTGTCAATTCACGCATCTAAAAACGTGCATATTGACCGAATTAAATCTATTAACGCCACACTTCACGGAATTGATATTACATGTGGTGGTCTTGATTATCCTTACATGGGTGACGGGACAACTGCACCGTATCCGTCAAGAGATATTTATATCTCAGATTGTGAAGCCGCCTTCTTCGGTGACGATGGTATCACCACACACCATAGTGAGTATATCACAATCAGCAATTGTAACTGTCATGACCCACGTTTACTTGATAACTGTAACGGCATTGAAATTGATGATGGTTCTAGGCACGTTCAACTATCTAATAACACAACTAAGAATTGTTTTGGTGGCGTTGAAATTAAAGCACACGGAAACGTGCCTGCCGCCTACAACGTTAGCATCAATGGACATATGTCCATTGGAGACGTTCGCTCATACAATTTCCGGCACATTGGACATCATTCAGCAACAGATCCAGAGTCATTGTCGGCGAAAAACATTATCTGTAACAACTTGATCTCTGTTAATCCTAACAATAAACGAGGGTTTCAAAACAATGCATCACCAAGGGTTTTGGCTGTATCAGCGTATTACGGGGTAGTGATTAACGGACTGAGTGCATACACTGATGAACCAAGTAATTTAACAGAAACCGCAATTAGTGTTCAATTTAGAGCGAGAAACGTTAGTCTCTCTGGAATTGTTATGACAGGTTTCAGTATGGCAGAAAACGCAATATATGTAATCGGCGGTAGTCGTGGTGGCGACAGCGTTAATATTTCAAACGTTACATTAAACAACTCAGGAAGAAACGGTGTTGCTATTGGTTCAGGTATTGACAACGTTTCTATCACAAATGTTAGTGCCATCGGTGGCGGTGTTGTGAATCCAATCGCTATTGTGAAAACAGTTAATAGCAATCCACAAATATCTGGTGTGAATGGTATCGGGTATCCAGTTGTGTGTCAAGTTGCTGGAATTAACTACAATGATGGTCTCACACTCTTTAACGGGGCATTCCGTGCGGCAACATCATCGAGTGAATACATTCACAGTGAGGGGTTTGTGTTAGGTGGAACAAGTAAATCAGGGGCAACAGCATCCAAGTCTGGTGTTGTGGCGTCTAGTTCATCTATCGCTAATGCTGAGCGTTCACTAATTTCAGGTAGTGCTGGTTGCGTAACTAATGGCTCTTATAACACAATCCTAGGTTCATTGAACTGTGAAACAACAAACACTGGAAACCTTATTTCAACATCCTCGGCGTCTAAGGCAACCGGAAACCGTAATATTGTTCTTGCAAGTTACGGTGTTCTAGCAAGTGGTTCATACAAAGTAAACGGCGGGTACGGTGGAGAAGGAACACCAAGTGCGACTAACATTAAATGGGAGTTAGATTCACTCAATGGTAACATCAAAGCCGCAAACGCTGTTACTGGAGCGAACACATGGAGTGACTATGGCGAATACTTTGAAACTGTTGATGGGCAAGCCATTGAAACAGGTTATCTTGTTACTCTTGAGGGCGGTAAGATACGGAAAGCACAGGAAGGTGAAAAAATCATCGGTGCTATTTCTGAAACGGCTGGTGTTGTTCTCGGTGAAAGCACATGGAACTGGCAGGGGCAATATATGAAAAATGAGTTTGGTGGGTTAATCTATGAAACTGTGGAAATAGATGATGGTGTATTTGAAAAGATGCCTAAAGTCAATCCATCTTATAACCCTGAACTAGAATACATGTCTCGTGGAGAGAGACCTGAGTGGAACATTGTTGGATTGGTTGGTCAAATCATGGTTCGCATTGATGACACTGTGAAAATTGGCAACGGAATCTCTGCTAAGGATGGAATTGCAACAGACGGTGACACTGGTATTGTTATGGAAATCACAACACCTTATGAACCTAGTAAGGGTTACGGTGTGGCAAAAGTGTTACTGAAATAG

Genome Context

Tertiary structure

AMR58248.1
ESMFold structure
Source ESMFold
pLDDT 74.1
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Genome sequence of Bacillus subtilis phage vB_BsuP_Goe1 Hertel,R., Willms,I.M. and Daniel,R. 2016-09-08 — GenBank