Protein

View in Explore
Genbank accession
AMR58248.1 [GenBank]
Protein name
pre-neck appendage preprotein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MQKPELRRFEKLGEMMVQVYERYLPTAFDESMTLLEKMNKIIEYLNQIGRLTNDVVEEWNKVMEWILNDGLEDYVKETLEKWYEEGKFADLVIQVIDELKQFGVSVKTYGAVGDGKTDDIEAFEKAIASGYPVYIPNGKFAVSRSIKIPSNTVITGAGIDNAVVTFLDSVPLGDSLMINDNYATGNENIYLSDFTLDGNCQRFGVNAIGSGGSRDSNLSIHASKNVHIDRIKSINATLHGIDITCGGLDYPYMGDGTTAPYPSRDIYISDCEAAFFGDDGITTHHSEYITISNCNCHDPRLLDNCNGIEIDDGSRHVQLSNNTTKNCFGGVEIKAHGNVPAAYNVSINGHMSIGDVRSYNFRHIGHHSATDPESLSAKNIICNNLISVNPNNKRGFQNNASPRVLAVSAYYGVVINGLSAYTDEPSNLTETAISVQFRARNVSLSGIVMTGFSMAENAIYVIGGSRGGDSVNISNVTLNNSGRNGVAIGSGIDNVSITNVSAIGGGVVNPIAIVKTVNSNPQISGVNGIGYPVVCQVAGINYNDGLTLFNGAFRAATSSSEYIHSEGFVLGGTSKSGATASKSGVVASSSSIANAERSLISGSAGCVTNGSYNTILGSLNCETTNTGNLISTSSASKATGNRNIVLASYGVLASGSYKVNGGYGGEGTPSATNIKWELDSLNGNIKAANAVTGANTWSDYGEYFETVDGQAIETGYLVTLEGGKIRKAQEGEKIIGAISETAGVVLGESTWNWQGQYMKNEFGGLIYETVEIDDGVFEKMPKVNPSYNPELEYMSRGERPEWNIVGLVGQIMVRIDDTVKIGNGISAKDGIATDGDTGIVMEITTPYEPSKGYGVAKVLLK
Physico‐chemical
properties
protein length:861 AA
molecular weight: 91982,54980 Da
isoelectric point:4,89551
aromaticity:0,07782
hydropathy:-0,18664

Domains

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage vB_BsuP-Goe1
[NCBI] 		1807511 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMR58248.1 [NCBI]
Genbank nucleotide accession
KU831549 [NCBI]
CDS location
range 10958 -> 13543
strand +
CDS
ATGCAGAAACCTGAGTTAAGACGTTTTGAAAAGTTGGGAGAAATGATGGTGCAAGTTTACGAACGCTATCTCCCTACTGCTTTTGATGAAAGTATGACCTTGTTAGAGAAAATGAATAAGATCATTGAGTACCTCAATCAGATTGGTCGCTTAACCAATGATGTTGTCGAGGAATGGAACAAGGTTATGGAATGGATTCTCAATGACGGTTTAGAAGACTACGTTAAAGAGACACTTGAGAAGTGGTATGAAGAAGGAAAATTTGCCGATCTTGTTATTCAGGTGATAGACGAATTAAAACAGTTTGGCGTTAGTGTTAAAACATATGGCGCTGTGGGTGATGGAAAAACAGATGACATTGAAGCGTTTGAAAAAGCCATTGCTTCTGGATACCCTGTTTACATTCCAAATGGTAAATTCGCCGTATCCCGATCAATTAAAATACCATCAAACACAGTTATTACAGGGGCAGGGATTGACAACGCTGTAGTCACATTTCTTGATAGTGTTCCGTTAGGCGATAGCCTTATGATAAACGATAACTACGCAACTGGTAACGAAAATATCTATCTGTCTGATTTCACCCTTGACGGTAACTGTCAGCGCTTTGGTGTAAATGCGATTGGTAGCGGTGGATCACGTGATAGTAACTTGTCAATTCACGCATCTAAAAACGTGCATATTGACCGAATTAAATCTATTAACGCCACACTTCACGGAATTGATATTACATGTGGTGGTCTTGATTATCCTTACATGGGTGACGGGACAACTGCACCGTATCCGTCAAGAGATATTTATATCTCAGATTGTGAAGCCGCCTTCTTCGGTGACGATGGTATCACCACACACCATAGTGAGTATATCACAATCAGCAATTGTAACTGTCATGACCCACGTTTACTTGATAACTGTAACGGCATTGAAATTGATGATGGTTCTAGGCACGTTCAACTATCTAATAACACAACTAAGAATTGTTTTGGTGGCGTTGAAATTAAAGCACACGGAAACGTGCCTGCCGCCTACAACGTTAGCATCAATGGACATATGTCCATTGGAGACGTTCGCTCATACAATTTCCGGCACATTGGACATCATTCAGCAACAGATCCAGAGTCATTGTCGGCGAAAAACATTATCTGTAACAACTTGATCTCTGTTAATCCTAACAATAAACGAGGGTTTCAAAACAATGCATCACCAAGGGTTTTGGCTGTATCAGCGTATTACGGGGTAGTGATTAACGGACTGAGTGCATACACTGATGAACCAAGTAATTTAACAGAAACCGCAATTAGTGTTCAATTTAGAGCGAGAAACGTTAGTCTCTCTGGAATTGTTATGACAGGTTTCAGTATGGCAGAAAACGCAATATATGTAATCGGCGGTAGTCGTGGTGGCGACAGCGTTAATATTTCAAACGTTACATTAAACAACTCAGGAAGAAACGGTGTTGCTATTGGTTCAGGTATTGACAACGTTTCTATCACAAATGTTAGTGCCATCGGTGGCGGTGTTGTGAATCCAATCGCTATTGTGAAAACAGTTAATAGCAATCCACAAATATCTGGTGTGAATGGTATCGGGTATCCAGTTGTGTGTCAAGTTGCTGGAATTAACTACAATGATGGTCTCACACTCTTTAACGGGGCATTCCGTGCGGCAACATCATCGAGTGAATACATTCACAGTGAGGGGTTTGTGTTAGGTGGAACAAGTAAATCAGGGGCAACAGCATCCAAGTCTGGTGTTGTGGCGTCTAGTTCATCTATCGCTAATGCTGAGCGTTCACTAATTTCAGGTAGTGCTGGTTGCGTAACTAATGGCTCTTATAACACAATCCTAGGTTCATTGAACTGTGAAACAACAAACACTGGAAACCTTATTTCAACATCCTCGGCGTCTAAGGCAACCGGAAACCGTAATATTGTTCTTGCAAGTTACGGTGTTCTAGCAAGTGGTTCATACAAAGTAAACGGCGGGTACGGTGGAGAAGGAACACCAAGTGCGACTAACATTAAATGGGAGTTAGATTCACTCAATGGTAACATCAAAGCCGCAAACGCTGTTACTGGAGCGAACACATGGAGTGACTATGGCGAATACTTTGAAACTGTTGATGGGCAAGCCATTGAAACAGGTTATCTTGTTACTCTTGAGGGCGGTAAGATACGGAAAGCACAGGAAGGTGAAAAAATCATCGGTGCTATTTCTGAAACGGCTGGTGTTGTTCTCGGTGAAAGCACATGGAACTGGCAGGGGCAATATATGAAAAATGAGTTTGGTGGGTTAATCTATGAAACTGTGGAAATAGATGATGGTGTATTTGAAAAGATGCCTAAAGTCAATCCATCTTATAACCCTGAACTAGAATACATGTCTCGTGGAGAGAGACCTGAGTGGAACATTGTTGGATTGGTTGGTCAAATCATGGTTCGCATTGATGACACTGTGAAAATTGGCAACGGAATCTCTGCTAAGGATGGAATTGCAACAGACGGTGACACTGGTATTGTTATGGAAATCACAACACCTTATGAACCTAGTAAGGGTTACGGTGTGGCAAAAGTGTTACTGAAATAG

Tertiary structure

PDB ID
4bd81533134c87276a4fbb9d703788d7c2746c07d536604d4924fff2e4d93529
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7414
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of Bacillus subtilis phage vB_BsuP_Goe1 Hertel,R., Willms,I.M. and Daniel,R. 2016-09-08 — GenBank