Protein

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Genbank accession
XKI62443.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,62
Protein sequence
MSTITQFPSGNTQYRIEFDYLARTFVVVTLVNSSNPALNRVLEVGRDYRFLNPTMIEMLVDQSGFDIVRIHRQTGTDLVVDFSNGSVLTASDLTNSELQSIHIAEEGRDQTVDLAKEYADAAGISAGNAKDSEDEARRIASSIKASGLIGYIPRRSFEKGFNVTAWNEALLWEEDGDYYRWEGTLPKNVPAGSTPESSGGIGLGAWVSVGDILEQKVYIVVITGQSNAQGANSGGPNPASPHVKVWDGTTNTWGSSDYTQLPFSQSTPNGNGGNNNIALSFAHRLIDEHRNSKVYVIYDAVGGRPISDWVGSGTASIRYAAIKAKVEAALATPELVAAGKTKIDYLIWAQGEGDALTDTITVYRDKFKTLDTQFRSEAWMENHTPMFVMGMSGLHTRYQVWQGQLSYCENQNRNCIYVNSMGLKTQYDVSGTGDYTHWLGDSLWEHGYHRIWYALQERGITHRNQLAPFYGRGTGPWDGQPDAIAMFSSLVSIDSATYQFPTNSVAATGSITWGLNCAADGNYTFAGGHTVTTDNTCNYSAAWGRSISLGPGAQYSASFGRENNVTGNHQFAVGRGHTTSSDGETCLGTFSFYASEQTNKVKLQVGVGSSSSVKKNAITARADGAVEINVSSSHEPAQKGEMVIHAESNTSLRIKVRGTDGVVRSTVLTLA
Physico‐chemical
properties
protein length:671 AA
molecular weight: 72835,72390 Da
isoelectric point:5,55649
aromaticity:0,09538
hydropathy:-0,35022

Domains

Domains [InterPro]
IPR005604
10–113
IPR005604 G3DSA:2.10.10.80 SSF52266 IPR011049
IPR040775
154–211
IPR040775 IPR052940 IPR011049
IPR036514
218–466
IPR036514
IPR005181
219–428
IPR005181
XKI62443.1
1 671
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage CHRF_30001
[NCBI] 		3377765 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKI62443.1 [NCBI]
Genbank nucleotide accession
PQ336910.1 [NCBI]
CDS location
range 4349 -> 6364
strand +
CDS
ATGTCCACGATTACACAATTCCCTTCAGGAAACACTCAGTACAGGATTGAGTTCGACTACCTAGCCAGAACGTTTGTTGTTGTTACGCTGGTGAATAGCTCTAACCCTGCCCTGAACCGTGTACTGGAAGTTGGTCGAGATTACCGATTCCTTAATCCAACGATGATTGAGATGTTGGTTGACCAATCAGGTTTCGACATCGTTCGTATTCACCGTCAGACTGGAACTGACTTAGTGGTAGACTTCAGTAATGGCTCAGTGTTGACAGCTAGTGACCTGACCAATTCAGAGCTTCAGTCTATCCATATTGCAGAAGAAGGTCGAGACCAAACTGTTGACTTAGCGAAGGAATATGCCGATGCTGCTGGTATCTCTGCTGGCAACGCTAAGGATAGCGAGGACGAAGCACGACGAATCGCTTCGAGTATCAAGGCATCTGGACTAATTGGCTATATCCCCCGTCGCTCCTTCGAGAAAGGCTTCAACGTTACAGCATGGAACGAGGCCCTGCTATGGGAAGAGGATGGTGATTATTACCGCTGGGAGGGTACGCTTCCAAAGAACGTTCCTGCTGGTTCAACTCCTGAATCATCTGGCGGTATTGGTCTGGGTGCTTGGGTTAGTGTTGGTGATATCCTTGAGCAGAAGGTTTACATAGTAGTAATCACCGGGCAGTCGAATGCTCAGGGTGCTAACTCCGGTGGGCCTAATCCAGCGTCGCCTCATGTTAAAGTATGGGATGGTACTACTAATACTTGGGGTAGTAGTGATTATACGCAATTACCTTTCTCCCAAAGTACCCCTAATGGTAATGGTGGGAATAACAACATTGCTTTGTCTTTTGCTCATCGTTTAATTGATGAACATAGGAATTCCAAAGTTTACGTTATCTACGATGCTGTTGGTGGGCGGCCTATTAGTGATTGGGTCGGTTCTGGCACTGCATCTATTCGTTACGCTGCAATCAAAGCTAAAGTAGAGGCTGCATTGGCTACACCTGAACTAGTGGCTGCTGGTAAAACTAAGATTGATTACCTGATTTGGGCGCAAGGGGAAGGAGATGCACTGACTGATACCATTACGGTTTACCGTGATAAGTTTAAAACCTTGGATACACAATTCCGTTCCGAAGCGTGGATGGAGAATCATACCCCAATGTTTGTGATGGGTATGTCTGGTCTTCATACTCGTTATCAGGTATGGCAAGGACAATTGAGTTACTGTGAGAACCAGAACCGTAACTGTATTTACGTTAACTCTATGGGACTAAAGACTCAGTATGACGTATCAGGTACAGGTGATTATACACACTGGTTGGGTGATTCACTGTGGGAGCATGGTTATCATCGTATCTGGTATGCACTCCAAGAACGAGGCATTACTCACCGTAACCAACTGGCTCCGTTCTATGGACGTGGTACTGGTCCGTGGGATGGGCAGCCTGATGCAATTGCTATGTTTAGTTCTCTGGTAAGTATTGACTCAGCAACATATCAGTTTCCAACCAATAGTGTAGCTGCTACTGGTTCCATTACTTGGGGACTGAACTGTGCAGCAGATGGTAACTACACCTTCGCAGGTGGTCATACTGTAACAACGGATAATACATGTAACTACTCTGCTGCATGGGGTAGGAGCATCTCACTGGGACCCGGTGCTCAGTATAGTGCAAGTTTCGGTAGGGAGAACAACGTAACTGGTAATCACCAGTTTGCAGTTGGTCGAGGCCACACTACCAGCAGTGACGGTGAAACCTGTCTAGGTACTTTCTCTTTCTATGCGTCAGAGCAAACAAACAAGGTGAAGCTACAGGTTGGTGTTGGTTCTTCCTCTTCTGTTAAGAAGAATGCCATCACAGCAAGGGCAGATGGTGCGGTAGAGATTAATGTATCATCTAGCCATGAGCCAGCACAAAAAGGTGAAATGGTAATCCATGCGGAATCTAATACTTCGTTACGCATCAAAGTTCGTGGCACTGATGGTGTAGTTAGGTCTACTGTTTTAACGCTGGCATAA

Tertiary structure

PDB ID
7186a3a319d19cba4a456d6a7d2445cdebe92724cb427ed3567e12da0ed1db9e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7920
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequences of bacteriophages that infect Salmonella Typhi from Bangladesh Islam,S., Kabiraj,R., Sarkar,H., Dev,P.C., Tanni,A.A., Keya,D.P., Malakar,A.R., Tanmoy,A.M., Saha,S.K., Hooda,Y. and Saha,S. — — GenBank