Protein

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Genbank accession
YP_009594263.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MALYRRGTASMDADGTVRGTDTKWKDQLALIRVGATIVFLEQPIKLAVISDIVSDTELKAISTDGQTAADGKYVILLNDSLTVNGLAQNVAETLRYYQSKETEIAAALDIINQLDMDKLEQIVTEVNKAKPDSQAAQNQAELARDAANAARDETNSIKNQTQQIVDGAVGSINAAKEQAITDIGSKESSVITHIDTEEAAAIQAINEAKGDLSGYVNDAQTAAQTATSAKNDAQSARDDAVSSKDAAAVSAQEAKDAANSVNADNLLTKDGNLAGLEDKLESWKNLRPDAPLELLKDPEGNMDATTKGWVEKGLKVNDWSIYKNVDSEPPSGSDSSGGRIDSKFKVGEVDKYRSSFELQGGNEIDIWTRITTINDRYKQGAATWDFKLDGKLIFNKGLVPNGTGYAPGNTYLTLANTWMSSQYSGYIGLVGGGVGVSNGGWRNFISLGSLIFPNGSHPHAVISQVYDYDIASGNQPNGNIVRNTSFNAESYDITFGNNSGTVNYIFSKSPVSDERLKSDINDIETRLALDNLMKMKYRSFTYNYDKEKTVRRGFIAQQLMSIDSQYVRKYGNMNGEDYTLSLDENVLLLDAIAAIQELSKQVSSLKEEIKSLKQS
Physico‐chemical
properties
protein length:615 AA
molecular weight: 66791,26240 Da
isoelectric point:4,76643
aromaticity:0,06829
hydropathy:-0,46618

Domains

Domains [InterPro]
Coil
133–153
Coil IPR030392
IPR030392
512–567
IPR030392 Coil
YP_009594263.1
1 615
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage JMPW1
[NCBI] 		1772219 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009594263.1 [NCBI]
Genbank nucleotide accession
NC_041874.1 [NCBI]
CDS location
range 33396 -> 35243
strand -
CDS
ATGGCTTTATATAGACGCGGTACAGCATCAATGGATGCAGATGGAACGGTTCGCGGAACCGATACAAAATGGAAGGATCAGCTTGCTCTGATTCGAGTAGGTGCAACTATCGTATTCCTGGAGCAACCAATTAAGCTGGCTGTAATCAGCGATATCGTGAGCGACACTGAGTTAAAGGCTATCTCTACGGATGGTCAGACTGCCGCTGACGGTAAGTATGTGATCCTGCTTAACGATTCACTGACTGTAAACGGCTTAGCTCAAAACGTTGCTGAAACGCTGCGATACTACCAGAGCAAAGAAACTGAGATTGCTGCGGCTCTTGATATCATCAATCAGCTTGATATGGATAAACTTGAGCAAATAGTTACTGAGGTGAATAAGGCGAAACCTGATTCTCAAGCTGCGCAAAATCAGGCTGAATTAGCGCGTGACGCAGCCAACGCTGCACGCGATGAAACTAACTCAATCAAGAACCAGACTCAACAAATTGTTGACGGTGCTGTAGGTAGTATTAATGCAGCAAAGGAACAGGCTATTACTGATATCGGATCTAAGGAATCATCTGTCATCACTCACATTGACACTGAAGAGGCGGCAGCGATTCAGGCCATTAATGAGGCGAAAGGTGATTTATCAGGTTACGTTAATGACGCTCAAACGGCAGCACAAACTGCAACCTCTGCAAAGAACGATGCTCAATCGGCGCGTGATGATGCGGTTAGTTCAAAAGACGCGGCGGCAGTAAGTGCTCAGGAAGCGAAAGACGCAGCAAATAGCGTTAATGCTGACAATCTTTTAACTAAGGACGGTAATTTAGCTGGTCTTGAGGATAAATTAGAATCATGGAAAAACTTGAGGCCAGACGCCCCATTAGAGTTACTTAAAGATCCTGAAGGCAATATGGACGCAACTACTAAGGGTTGGGTTGAGAAAGGCCTAAAAGTAAACGACTGGTCTATTTATAAAAATGTAGACTCTGAGCCGCCAAGCGGTTCCGATTCTTCAGGCGGCAGGATTGATTCAAAATTCAAGGTTGGTGAAGTTGATAAGTACAGATCCTCTTTCGAATTGCAGGGAGGTAATGAAATAGATATATGGACAAGGATAACAACAATCAATGACAGATATAAGCAGGGCGCGGCAACGTGGGATTTCAAACTGGACGGAAAGTTGATTTTTAACAAGGGTCTAGTACCAAATGGAACTGGATATGCTCCAGGTAATACCTATTTGACATTGGCTAACACATGGATGAGTTCTCAGTACAGCGGTTATATTGGTTTAGTTGGTGGCGGCGTTGGTGTATCCAACGGCGGTTGGAGGAATTTTATCTCTCTTGGTTCGCTTATTTTTCCAAATGGTTCTCACCCCCACGCGGTAATATCTCAGGTGTACGATTATGATATAGCTTCAGGTAATCAGCCAAACGGTAACATTGTAAGGAATACATCGTTCAACGCTGAGAGTTACGACATAACGTTTGGGAATAACTCAGGTACTGTCAACTATATATTTTCAAAGTCTCCAGTGTCAGATGAGAGACTTAAAAGCGACATAAATGATATTGAAACAAGATTGGCGCTTGATAATTTGATGAAAATGAAATACCGATCATTCACATACAATTATGACAAGGAGAAAACTGTAAGGAGAGGGTTCATAGCTCAACAACTTATGAGCATAGATAGTCAGTACGTTAGAAAGTACGGAAATATGAATGGAGAAGATTACACGCTATCACTGGATGAGAACGTTCTTTTGCTTGACGCTATAGCTGCGATACAGGAGCTTTCAAAGCAAGTATCTTCTCTAAAAGAAGAAATAAAATCACTTAAACAATCATAA

Tertiary structure

PDB ID
4811c351d39e69519ea1489a661f6e2083652379f6037af800c8f9db92b30b9d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6708
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic identification of Escherichia phage JMPW1 Wang,J., Lu,S., Shen,M., Zhu,H., Le,S., Li,G., Tan,Y., Zhao,X., Shen,W., Guo,K., Yang,Y., Li,S., Li,M., Zhu,J., Rao,X. and Hu,F. 2023-05-11 — GenBank