Protein

View in Explore
Genbank accession
XRA11009.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MVKNMITGSKGGSSKPHTPVEMEDNLISINRIRILLAVSDGEVDPDFSLKDLYFDDVPVMNQDGSLNFQNVKAEFRPGSQTQDYIQGFTDTASEITVARDLTAATPYIISVTNKNLSAIRIKILMPRGFTQEDNGDLTGVRVEYAVDMAIDGAEYNEVLHDVIEGKTMSGYDRSRRIDLPAFNERVLLRVRRLTDSTSARVTDLIKMQSYAEVVDAKFRYPMTGLVYVEFDSELFPNALPNISIKKKWKIINVPSNYDPISRTYSGSWDGTWKKAWSNNPAFVLYDLITNQRYGLDQRELGIALDKWSIYECAQYCDQMVPDGKGGTEPRYLCDVVIQSQVEAYQLVRDICSIFRGMSFWNGESLSIVIDKPRDPSYIFTNDNVVNGEFTYTFASEKSMYTQCNVTFDDEQNMYQQDVEGVFETEAALRFGYNSTSITAIGCTRRSEANRRGRWILKTNVKSTTVNFATGLEGMIPTVGDVIVVSDNFWSSALTLNLSGRLMEVSGLQVFTPFKVDARAGDRILVNKPDGKPVGRTIARVSDDGKTLTLNTTFGFDVHPDTIFAIERTDIAQQRYVVTGITKGDGDEEFTYNITAVEYDPNKYDEIDYGVNIDDRPTSIVQPDVLPAPENVKIESYSRVVQGASVETMHVSWDKVEYASLYEMQWRKDNGNWNNTPRTANKETEVEGIYAGNYHVRVRSVASNGSASGWSKIVSAELTGKVGEPEKPINLTASDDEVFGIRVKWGMPEGSGDTAYIELHQAPNGADGHPLVDQATLLTLVPFPQYEYWHSILPAGHVVWYKARSVDKIGNVSDWTDFVRGMASTDTSIITDHIKVDIENSEGYKWLEENAIKSNDKIHSAAESIIQNALANDTDVRRMRVENGKRKAEFLQSLKLIADETEARVTAVTQLSAQFDEKLTSQNSELREVIANASETLSQQINQLTATFEGEIDGVKQDISAQITEVNKAITNEAEARASADQALSTQIGDTQSAVNQKVDSWVNADSVGAMYGVKLGLRYNGQEYSAGMALSLVADGGGVKSQFLFDAGRFAIINNAQSGAFTLPFVVEGNQVYINSLLVKDGTITTAKIADQINSTNWSSGAAGWAINKGGYAEFNQVTVRGNVYASDGIFNGVIYARGGHFTGTVEAESFVGDVVNAGVGIDKEQLGSGGLSSTVVYTDSSGSATPKTAIFSAVCHMRGARSDKDTVVGVKVTINGVSRDFGGMFIPPAQEVFVPIHYAVQNITTQQVTATIELYNYSGLEGAVQKKIIAPTLQIARGSGSFTSY
Physico‐chemical
properties
protein length:1286 AA
molecular weight: 141558,56040 Da
isoelectric point:4,87863
aromaticity:0,09020
hydropathy:-0,29953

Domains

Domains [InterPro]
DC_0014
STR
1–1281
DC_0014
IPR053171
Unmapped
3–876
IPR053171 Coil IPR015406
IPR055385
ATT
92–216
IPR055385 IPR032876 IPR036116
IPR013783
STR
626–719
IPR013783
XRA11009.1
1 1286
Architecture
STR
ATT
STR
ATT
STR
STR 1-91 | ATT 92-216 | STR 217-338 | ATT 339-487 | STR 488-1281 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRA11009.1
1 1286
Domain Start End Length (AA) Confidence
N-terminal 1 486 486 0,8681
Central domain 487 1026 541 0,0934
C-terminal 1027 1286 259 0,5559
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-486
Central
487-1026
C-terminal
1027-1286

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_GS71
[NCBI] 		3403489 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Infantis
[NCBI] 		595 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRA11009.1 [NCBI]
Genbank nucleotide accession
PV090992.1 [NCBI]
CDS location
range 23637 -> 27497
strand +
CDS
ATGGTTAAAAATATGATAACTGGCAGTAAGGGCGGTTCATCTAAACCGCATACACCTGTTGAAATGGAAGATAACTTGATTTCAATTAACAGGATCAGAATTCTTTTAGCTGTTTCTGATGGTGAAGTTGATCCAGACTTTTCATTGAAAGATTTATATTTTGATGACGTTCCGGTTATGAATCAGGACGGGTCACTAAACTTTCAGAATGTTAAAGCTGAATTCAGACCAGGCTCACAAACGCAAGATTATATTCAGGGATTCACTGACACGGCGAGTGAGATTACTGTTGCTCGCGATCTTACGGCTGCAACTCCTTATATTATTTCCGTGACTAATAAAAACCTTTCCGCGATCCGTATTAAAATTTTAATGCCGCGAGGGTTTACACAGGAGGATAACGGAGATTTAACAGGCGTTCGCGTTGAATACGCCGTTGATATGGCTATTGATGGTGCTGAATATAACGAGGTTTTGCATGATGTGATCGAAGGTAAAACAATGAGCGGTTACGACAGAAGCCGCCGAATTGATTTACCCGCATTCAATGAGCGTGTTTTATTGCGTGTTCGTCGCCTGACAGATAGCACGTCAGCAAGGGTTACGGATTTGATTAAGATGCAGAGCTACGCAGAAGTAGTAGACGCTAAGTTTCGTTATCCCATGACTGGTTTAGTTTACGTTGAGTTTGACAGTGAATTATTCCCTAATGCTTTGCCGAATATCAGCATTAAAAAGAAATGGAAAATCATTAATGTTCCGTCTAATTACGATCCGATTAGCCGCACATATTCAGGCTCTTGGGATGGAACTTGGAAAAAGGCATGGAGCAATAACCCTGCTTTTGTTCTGTATGATTTAATCACCAATCAGCGTTACGGACTCGACCAACGCGAATTAGGCATTGCGCTTGATAAGTGGAGTATTTACGAATGTGCGCAATATTGCGATCAGATGGTTCCAGATGGCAAGGGTGGAACAGAGCCGCGCTATCTATGCGACGTTGTGATCCAGAGTCAAGTAGAGGCTTATCAGCTTGTTCGTGATATTTGCTCAATCTTCCGAGGAATGAGTTTTTGGAATGGTGAGAGCCTTTCAATCGTAATCGACAAGCCGCGCGATCCGTCATACATCTTTACTAATGACAACGTGGTTAATGGTGAATTTACTTACACGTTTGCCAGCGAAAAGAGCATGTATACACAATGCAACGTGACTTTCGACGACGAACAAAACATGTATCAACAGGACGTTGAAGGAGTTTTTGAAACAGAGGCTGCGTTACGTTTTGGATATAACAGCACGTCAATAACTGCCATTGGATGCACCCGACGCAGTGAGGCTAATCGCCGTGGTCGCTGGATTCTAAAAACCAACGTTAAGAGCACAACAGTAAACTTTGCTACTGGCCTGGAAGGTATGATCCCAACGGTAGGCGATGTAATTGTTGTTTCGGATAACTTCTGGTCAAGCGCCTTAACGCTGAATCTATCAGGTCGCTTGATGGAGGTTAGCGGGTTGCAGGTGTTCACGCCGTTTAAGGTAGACGCAAGAGCAGGTGATCGCATTCTGGTAAATAAGCCGGATGGTAAGCCAGTTGGTAGAACCATTGCGCGTGTGAGCGATGACGGCAAAACGCTAACGCTAAACACAACGTTTGGCTTTGACGTTCATCCTGACACCATTTTTGCAATCGAAAGAACGGATATTGCACAGCAACGCTATGTTGTAACCGGAATCACTAAAGGTGATGGTGATGAAGAATTTACCTACAACATAACGGCTGTTGAATACGATCCGAATAAATACGATGAAATTGATTATGGTGTAAACATTGATGACCGTCCGACTTCAATCGTGCAGCCTGACGTATTGCCAGCACCTGAAAACGTCAAGATCGAATCTTATTCGCGAGTTGTTCAGGGCGCGAGCGTGGAAACAATGCACGTTTCATGGGATAAAGTTGAATACGCAAGTCTGTATGAAATGCAGTGGCGAAAAGACAATGGCAACTGGAACAATACGCCGCGAACCGCGAACAAGGAAACGGAAGTTGAAGGTATTTATGCGGGTAACTATCACGTCAGGGTTAGATCTGTTGCATCAAATGGTTCTGCTTCAGGATGGTCTAAGATCGTAAGTGCAGAATTAACAGGTAAAGTTGGGGAACCTGAAAAGCCTATTAATTTGACGGCTTCCGATGATGAGGTATTTGGTATTCGCGTGAAATGGGGTATGCCGGAAGGAAGCGGAGATACTGCTTACATAGAGTTACACCAGGCGCCAAATGGTGCTGATGGTCATCCACTTGTTGATCAAGCTACGCTATTAACGCTTGTTCCATTCCCTCAATATGAATACTGGCATTCAATACTGCCAGCGGGTCATGTTGTATGGTACAAGGCAAGGTCAGTAGATAAAATCGGTAACGTGTCTGATTGGACTGATTTTGTACGAGGAATGGCATCAACTGACACAAGCATTATCACAGATCACATTAAGGTTGATATTGAAAATTCGGAGGGATACAAATGGCTTGAAGAGAACGCTATTAAATCAAACGATAAGATCCACAGTGCAGCAGAATCAATCATTCAGAATGCGTTAGCGAATGATACTGATGTTAGACGTATGCGCGTAGAGAACGGCAAGCGCAAAGCTGAATTCTTGCAGTCGTTAAAACTGATTGCAGATGAAACGGAAGCGCGCGTGACGGCTGTTACTCAATTAAGCGCTCAATTCGACGAGAAATTAACGTCTCAAAATAGCGAATTGAGAGAGGTTATTGCTAATGCTAGTGAAACCCTTAGCCAACAGATTAATCAGCTTACAGCTACGTTTGAGGGCGAAATAGACGGTGTTAAGCAAGATATATCAGCACAAATCACGGAAGTGAATAAGGCGATTACCAACGAAGCAGAAGCGCGAGCGTCAGCAGACCAGGCTCTTTCAACTCAGATTGGAGATACCCAATCAGCGGTTAACCAGAAGGTTGATTCTTGGGTTAATGCCGATAGCGTAGGCGCGATGTACGGCGTTAAGTTGGGATTGCGTTACAACGGGCAGGAGTATAGCGCAGGTATGGCTCTTTCTCTCGTTGCTGATGGTGGCGGTGTTAAATCACAATTCCTGTTTGATGCAGGACGATTTGCGATCATCAATAACGCTCAGAGCGGCGCGTTTACTCTACCGTTTGTTGTTGAAGGTAATCAGGTATATATCAATAGCTTACTGGTTAAAGATGGGACAATTACCACGGCTAAGATTGCTGATCAGATTAACTCAACAAACTGGAGCAGCGGCGCGGCAGGTTGGGCCATTAACAAAGGAGGTTACGCTGAATTCAACCAGGTAACTGTAAGGGGCAACGTTTACGCAAGCGATGGTATTTTTAATGGAGTTATCTATGCTCGCGGAGGTCATTTTACAGGAACGGTTGAAGCAGAAAGTTTCGTTGGTGACGTGGTTAATGCTGGTGTTGGTATTGACAAGGAACAGCTTGGTTCTGGTGGGCTATCATCAACTGTTGTCTACACTGATAGTTCTGGATCTGCAACACCTAAGACTGCAATATTTTCAGCGGTTTGTCATATGAGAGGTGCACGAAGCGATAAGGATACAGTTGTTGGTGTGAAAGTAACAATAAATGGAGTTTCTAGAGATTTTGGTGGTATGTTCATACCTCCTGCACAAGAGGTTTTCGTACCAATTCACTATGCAGTGCAGAATATTACCACTCAGCAAGTAACTGCAACAATTGAGCTTTATAACTACAGCGGACTTGAAGGAGCGGTACAGAAGAAAATAATCGCGCCAACATTGCAGATTGCAAGGGGTTCAGGATCATTTACATCGTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
370d0f714745c33d71920faaa4f8811afcb4e57b32f04d56172706ac5cf3c9d0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7596
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of lytic bacteriophages against Salmonella Infantis isolated from poultry farms in Ecuador Castillo-Beckmann,I., Gomez-Cano,I.S., Debut,A., Ballaz,S., Sevilla-Navarro,S. and Fernandez-Moreira,E. 2025-09-22 — GenBank