Phage RBP Database

Genbank accession

GENB_4494fb6cf65b [GenBank]

Protein name

tail spike protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

Seq2Symm

C6 confidence 0,834

C6	0,834
C1	0,022
C3	0,003

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MGLVSQSVKNLKGGISQQPDILRFSNQGALQINGWSSETQGLQKRPPTTFTKRLQSKGFLGTKPLVHLINRDAQEQYFVGFSGTGLSVWDLKGNNYTVRGYNGYANCANPRTDLRLITVADYTFVVNRNTVCQMGSTLTNAAYPRLDGRALINVRGGQYGRTLSITINGDGTGSSPQASIKMPNGSAEKVPAGDPYAGMNQVDMTDASWIAGELARQLQAALGPSGWSFQAGTGWILITAPANDNVRQIATKDGYADTLLNGFIYQVQTFTKLPANAPAGYIVEITGESARSGDNYWVQYDAAGKVWKETAKPKIISGFNAATLPHALVRAADGQFDWTPLTWDGRNAGDDDTNPMPSFIGSSINDVFFFRNRLGFLSGENVVMSRTSKYFNFFPSSVATLSDDDPIDVAISHNRISILKYAVPFSEQLLLWSDQAQFVLSSNGILSSKTIELDLTTEFDVSDGARPYGIGRGVYFAAPRASFTSLKRYYAIQDVSDVKSAEDVSAHVPSYITNTVHAIHGSGTENFVSILSDGSPNKVFIYKFLYLDEVLQQQSFSHWEFGDAATTRVLAASCIGSYCYLMIDRPEGLCLERMEFTQHTIDYSIEPYRTYMDMKKVVTLGAYNIDTNLTSFDVRTAYGGTPGAESTFYTIDQQGVLIEHEARDWATNPYITFVGDRAGEQVVIGKQYTFQYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWLNYEESGSFEINVNNGSSEFVYVMTGGRLGIQRVLGELSVGTGQFKFPVTGNAVNQRVTITSSNPNPLNVIGCGWEGNYIRRSSGI

Physico‐chemical properties

protein length:	808 AA
molecular weight:	88748,21220 Da
isoelectric point:	5,57098
aromaticity:	0,11139
hydropathy:	-0,26089

Domain architecture

GENB_4494fb6cf65b

1 808 aa

TTP 1–808

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR058003
TTP

IPR058003

GENB_4494fb6cf65b

1808 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR058003	TTP	DC_0684	1	808	InterPro cluster	Tail tubular protein gp12	Central	High	Text match	1810 proteins / 1902 hits

Proteins with similar domain architecture

Phage

Pseudomonas phage vB_PputP_LNA11 [NCBI] · taxon 2924911

Uroviricota Caudoviricetes Autographivirales Autotranscriptaviridae Ghunavirus Pseudomonas phage vB_PputP_LNA11

Host

Pseudomonas putida KT2440 [NCBI] · taxon 160488

Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas putida

Genbank protein accession

OM630590.1_CDS_[complement(535..2961)] [NCBI]

Genbank nucleotide accession

OM630590.1 [NCBI]

CDS location

range 535 -> 2961
strand -

CDS

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)