Protein

View in Explore
Genbank accession
YP_009626534.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTVKLSIDITSIGIESAPGDAVVLSSPVIRESLSRPGGLVSTAPFVAELTDGKTTVEVEPGPVVVSFRCRNIRDSTSKEVNIPQEDCSLADVLADHFTYSPSVESRITKAITDFWSGLAGVNELVTSAASSAQKAIGSEANVEKLASEVDSDAQSAQEAGAAANEAMETAQSAAKTAVEKAAAAGISQEEAAKSAKEALDAESRIGQADKDATAAAELATEKATESSNSAAAADKSAQDARAAADDATSGVADATSTVKGKIRLGGDLGGTASEPRVIGLTQKADLVGGLVPTSQLPAVALTKPQVVGDRAGMLGLTAQEGDVAIITSGEDKGTYMLGSGESSAFSSWVLLTPPSGAVSSVNGQTGMVNLAAADVGAAPTSHTHTSAQISDAVSTATASMVIRRDSAGRAQVAGPAASADIATKAYVDTGLSGKAAASHTHTSAQITDIHIVSALPASPTAGHVYIVTG
Physico‐chemical
properties
protein length:469 AA
molecular weight: 46898,35870 Da
isoelectric point:4,68952
aromaticity:0,02345
hydropathy:-0,01770

Domains

Domains [InterPro]
DC_1046
STR
91–469
DC_1046
IPR045571
RBD
253–277
IPR045571
YP_009626534.1
1 469
Architecture
STR
STR 91-469
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009626534.1
1 469
Domain Start End Length (AA) Confidence
N-terminal 1 383 383 0,9901
Central domain 384 458 76 0,0929
C-terminal 459 469 10 0,9944
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-383
Central
384-458
C-terminal
459-469

Taxonomy

  Name Taxonomy ID Lineage
Phage Corynebacterium phage Poushou
[NCBI] 		2015851 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009626534.1 [NCBI]
Genbank nucleotide accession
NC_042139 [NCBI]
CDS location
range 20384 -> 21793
strand +
CDS
ATGACAGTTAAACTTTCAATCGACATCACCAGCATCGGAATCGAATCCGCGCCGGGAGACGCAGTTGTGCTGTCATCCCCGGTTATCCGCGAATCTTTGTCCCGCCCTGGTGGATTGGTCTCTACAGCGCCGTTTGTCGCCGAGCTCACTGACGGAAAGACAACAGTCGAAGTGGAGCCAGGACCAGTGGTGGTGAGCTTTCGGTGTAGGAATATCAGGGACTCCACGTCGAAGGAGGTGAACATCCCTCAGGAGGACTGTAGCCTAGCCGACGTCCTAGCAGATCATTTCACTTATTCGCCGTCGGTGGAAAGTCGCATTACAAAAGCGATTACAGATTTTTGGTCTGGCCTGGCAGGAGTGAATGAGCTTGTTACTTCCGCAGCAAGCTCTGCACAAAAAGCAATTGGGTCAGAAGCGAATGTAGAGAAGCTTGCTAGTGAAGTGGACTCTGATGCGCAGTCTGCCCAAGAAGCGGGAGCTGCCGCGAATGAGGCAATGGAGACAGCACAGTCGGCGGCCAAGACGGCAGTAGAGAAAGCCGCTGCTGCAGGAATATCGCAGGAGGAGGCAGCCAAGTCTGCAAAGGAGGCATTGGATGCTGAGTCGAGGATCGGTCAAGCAGATAAGGACGCCACTGCGGCCGCTGAGCTGGCGACGGAAAAGGCCACTGAATCATCGAATTCCGCTGCGGCGGCAGATAAGTCGGCGCAGGATGCACGCGCTGCAGCTGATGATGCAACCTCAGGGGTCGCTGATGCAACCTCGACGGTGAAAGGAAAAATCCGGCTAGGCGGGGATCTCGGGGGGACAGCGTCTGAGCCCCGCGTGATTGGCCTTACTCAAAAGGCAGATCTGGTGGGTGGGTTGGTGCCCACTTCCCAGCTGCCTGCGGTTGCTCTGACTAAACCGCAGGTGGTGGGCGATCGCGCCGGGATGCTTGGGCTGACGGCCCAGGAAGGCGATGTTGCGATCATTACGTCCGGCGAGGACAAGGGTACGTACATGCTCGGCAGTGGTGAATCGTCGGCCTTCTCGTCGTGGGTGCTCCTTACTCCTCCGTCCGGCGCGGTATCCTCGGTTAACGGGCAGACCGGTATGGTCAACCTGGCCGCGGCTGATGTGGGGGCTGCACCCACATCTCACACGCATACGTCGGCGCAGATCAGTGACGCGGTGTCTACAGCTACGGCCAGCATGGTGATCAGACGCGATAGTGCAGGGCGGGCGCAGGTCGCGGGCCCAGCGGCGTCGGCGGATATCGCGACGAAGGCGTATGTGGATACCGGATTGTCTGGGAAGGCGGCCGCGTCTCACACGCATACGTCGGCGCAGATCACTGATATTCACATCGTGTCAGCGCTTCCAGCTTCGCCTACTGCTGGCCATGTCTACATCGTGACGGGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
623aba79caf80d5011c14a1b179445c69350d2dcb8be3ff4db8961a20add3414
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7081
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50