Protein

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Genbank accession
QRV61809.1 [GenBank]
Protein name
major capsid protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAETQVEERFGSSNDLFDNAITTDIQRSKFDLSRKNLFTADVGMIIPIDIIPTLPNDDFDISIRYMIDTMPLAVPPMNNYKVRTHWYYCRCSDLWRGFATFATKGRNENIELTIPQVNGSLTRDDEFATLLGSTSDADLNVSCPHSLLNMLGIAPLKHNGTANKNYLPCVPDSTALATGFKNLSSISALPFMMYQKIYRDNYAPINFLQSNQVWYPNDLSDEWRLNYDGSNVIGTDLISTDKHWFVPENSDITSAKNNKFHFVPHIDDTSVDLLQMRYACFDEDIFTSAKPWLVRGEETLLNFDVSKVSLDFSDVVNQSPAFTTPLYVGVSTTTNQLSGGSLRDNKIYNSAYSSLTSALQKTKVSGLVGTLTANTLRSLIAVSLWQESNALVNGNYNSLIGVHFKNNPKYDTFEPVYIGGTSDYIQFSDVLQTSPTSESPLGSQAGLGRLNSNGYVGRFHSTDYGFIMGVMIVSPEVVYADGVDKFWTDKVQSDLYFPEFANLGFQPILNERVFVSDNDNVNTNLFGYSTRYIEYKTRLNKVSGLLQLKDTDLLFSAYAQSRYYPSAPSLSLQFVTMSPMNLRRDWLSYPNQPAFKVQFASDITAIRPLPYQCQPSRLGM
Physico‐chemical
properties
protein length:620 AA
molecular weight: 69663,52450 Da
isoelectric point:5,04841
aromaticity:0,11774
hydropathy:-0,25968

Domains

Domains [InterPro]
IPR037002
ATT
19–282
IPR037002 IPR037002
IPR016184
Unmapped
21–120
IPR016184 IPR003514
IPR003514
STR
22–118
IPR003514 IPR016184
QRV61809.1
1 620
Architecture
ATT
STR
ATT
ATT 19-282 | STR 283-317 | ATT 318-615 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QRV61809.1
1 620
Domain Start End Length (AA) Confidence
N-terminal 1 252 252 0,8894
Central domain 253 451 200 0,0308
C-terminal 452 620 168 0,6694
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-252
Central
253-451
C-terminal
452-620

Taxonomy

  Name Taxonomy ID Lineage
Phage Microvirus sp.
[NCBI] 		2202559 Viruses > Monodnaviria > Sangervirae > Phixviricota > Malgrandaviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QRV61809.1 [NCBI]
Genbank nucleotide accession
MT135356 [NCBI]
CDS location
range 3785 -> 5647
strand +
CDS
ATGGCTGAAACTCAAGTTGAAGAACGTTTTGGTTCTAGTAATGATTTGTTTGATAATGCAATAACTACTGATATCCAGCGTTCTAAATTCGATTTATCTCGTAAAAATCTCTTTACTGCTGACGTAGGTATGATTATCCCTATTGATATTATTCCTACTCTTCCCAATGATGACTTTGATATATCTATTCGGTATATGATTGACACGATGCCCTTGGCTGTTCCCCCTATGAATAACTATAAGGTTCGTACTCACTGGTATTATTGCCGTTGTTCTGATTTATGGCGTGGTTTCGCTACTTTTGCAACTAAAGGTCGCAATGAAAATATTGAACTGACTATTCCCCAGGTTAATGGCTCTCTCACTCGTGATGATGAATTTGCTACTTTACTCGGTTCTACTTCTGATGCTGATCTTAATGTATCTTGTCCACATTCTCTTTTGAATATGCTTGGTATTGCTCCTTTAAAGCATAATGGTACTGCTAATAAAAATTATTTACCTTGTGTCCCTGATTCCACTGCTCTTGCTACTGGGTTTAAAAATCTTTCTTCTATTTCTGCTTTACCTTTTATGATGTATCAAAAGATTTATCGTGACAACTATGCTCCAATTAATTTCTTACAGTCTAACCAGGTTTGGTATCCTAACGACCTTTCTGACGAGTGGCGTCTTAATTACGACGGTTCTAATGTTATTGGTACTGATTTAATTTCTACTGATAAACATTGGTTTGTACCTGAAAACTCCGATATTACTTCTGCTAAAAATAATAAGTTCCACTTTGTACCGCACATTGATGACACTAGTGTTGATTTGCTTCAAATGCGTTATGCTTGTTTCGATGAAGATATTTTTACTTCTGCTAAACCTTGGCTTGTTCGTGGTGAAGAAACTCTACTCAATTTCGATGTATCGAAAGTTAGTCTTGATTTTTCTGATGTTGTCAATCAATCTCCTGCGTTTACTACTCCTCTCTACGTAGGTGTTTCTACCACTACTAACCAACTTAGTGGCGGTTCTTTACGTGATAATAAGATTTATAATAGTGCTTATTCTTCTCTTACTTCTGCTCTCCAGAAAACAAAAGTTTCTGGTCTTGTTGGCACCCTTACCGCTAATACTTTACGTTCTCTAATTGCTGTTTCTCTTTGGCAAGAGAGTAATGCCCTTGTTAACGGAAATTATAACTCTTTAATCGGTGTTCATTTTAAGAATAATCCTAAATATGACACGTTTGAACCTGTTTATATTGGTGGTACTTCTGATTATATTCAGTTTTCAGATGTCCTTCAGACTAGTCCTACATCTGAATCTCCTTTAGGTTCTCAGGCTGGTTTAGGTCGTCTTAATTCTAACGGTTATGTTGGTCGTTTCCATTCGACTGATTACGGCTTTATAATGGGCGTTATGATTGTTTCTCCAGAAGTTGTCTATGCTGATGGTGTTGATAAGTTCTGGACAGATAAAGTACAATCTGACCTTTACTTCCCTGAATTTGCTAACCTTGGATTTCAGCCTATTCTTAATGAGCGTGTTTTTGTTTCAGATAATGACAATGTAAATACTAACCTATTTGGCTATTCCACTCGTTATATTGAATATAAGACTCGTTTGAATAAGGTTTCTGGTCTTTTGCAATTAAAAGATACTGACTTGCTTTTCTCTGCTTATGCTCAAAGTCGCTATTATCCGTCTGCCCCGTCTTTGTCTTTGCAGTTTGTTACTATGTCCCCAATGAATTTGCGTCGTGATTGGTTGTCATATCCTAATCAACCCGCTTTTAAGGTCCAGTTTGCAAGTGATATTACTGCAATTCGTCCACTTCCTTATCAGTGTCAGCCGTCAAGATTAGGAATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4c5ed662d163332ba2a189bdb92e8572717253088971e9a57087ac2541d82faf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4953
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A reference catalog of swine virome He,B. and Tu,C. 2026-03 — GenBank