Protein

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Genbank accession
QRV61809.1 [GenBank]
Protein name
major capsid protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAETQVEERFGSSNDLFDNAITTDIQRSKFDLSRKNLFTADVGMIIPIDIIPTLPNDDFDISIRYMIDTMPLAVPPMNNYKVRTHWYYCRCSDLWRGFATFATKGRNENIELTIPQVNGSLTRDDEFATLLGSTSDADLNVSCPHSLLNMLGIAPLKHNGTANKNYLPCVPDSTALATGFKNLSSISALPFMMYQKIYRDNYAPINFLQSNQVWYPNDLSDEWRLNYDGSNVIGTDLISTDKHWFVPENSDITSAKNNKFHFVPHIDDTSVDLLQMRYACFDEDIFTSAKPWLVRGEETLLNFDVSKVSLDFSDVVNQSPAFTTPLYVGVSTTTNQLSGGSLRDNKIYNSAYSSLTSALQKTKVSGLVGTLTANTLRSLIAVSLWQESNALVNGNYNSLIGVHFKNNPKYDTFEPVYIGGTSDYIQFSDVLQTSPTSESPLGSQAGLGRLNSNGYVGRFHSTDYGFIMGVMIVSPEVVYADGVDKFWTDKVQSDLYFPEFANLGFQPILNERVFVSDNDNVNTNLFGYSTRYIEYKTRLNKVSGLLQLKDTDLLFSAYAQSRYYPSAPSLSLQFVTMSPMNLRRDWLSYPNQPAFKVQFASDITAIRPLPYQCQPSRLGM
Physico‐chemical
properties
protein length:620 AA
molecular weight: 69663,52450 Da
isoelectric point:5,04841
aromaticity:0,11774
hydropathy:-0,25968

Domains

Domains [InterPro]
IPR037002
19–282
IPR037002 IPR037002
IPR016184
21–120
IPR016184 IPR003514
IPR003514
22–118
IPR003514 IPR016184
QRV61809.1
1 620
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Microvirus sp.
[NCBI] 		2202559 Viruses > Monodnaviria > Sangervirae > Phixviricota > Malgrandaviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QRV61809.1 [NCBI]
Genbank nucleotide accession
MT135356 [NCBI]
CDS location
range 3785 -> 5647
strand +
CDS
ATGGCTGAAACTCAAGTTGAAGAACGTTTTGGTTCTAGTAATGATTTGTTTGATAATGCAATAACTACTGATATCCAGCGTTCTAAATTCGATTTATCTCGTAAAAATCTCTTTACTGCTGACGTAGGTATGATTATCCCTATTGATATTATTCCTACTCTTCCCAATGATGACTTTGATATATCTATTCGGTATATGATTGACACGATGCCCTTGGCTGTTCCCCCTATGAATAACTATAAGGTTCGTACTCACTGGTATTATTGCCGTTGTTCTGATTTATGGCGTGGTTTCGCTACTTTTGCAACTAAAGGTCGCAATGAAAATATTGAACTGACTATTCCCCAGGTTAATGGCTCTCTCACTCGTGATGATGAATTTGCTACTTTACTCGGTTCTACTTCTGATGCTGATCTTAATGTATCTTGTCCACATTCTCTTTTGAATATGCTTGGTATTGCTCCTTTAAAGCATAATGGTACTGCTAATAAAAATTATTTACCTTGTGTCCCTGATTCCACTGCTCTTGCTACTGGGTTTAAAAATCTTTCTTCTATTTCTGCTTTACCTTTTATGATGTATCAAAAGATTTATCGTGACAACTATGCTCCAATTAATTTCTTACAGTCTAACCAGGTTTGGTATCCTAACGACCTTTCTGACGAGTGGCGTCTTAATTACGACGGTTCTAATGTTATTGGTACTGATTTAATTTCTACTGATAAACATTGGTTTGTACCTGAAAACTCCGATATTACTTCTGCTAAAAATAATAAGTTCCACTTTGTACCGCACATTGATGACACTAGTGTTGATTTGCTTCAAATGCGTTATGCTTGTTTCGATGAAGATATTTTTACTTCTGCTAAACCTTGGCTTGTTCGTGGTGAAGAAACTCTACTCAATTTCGATGTATCGAAAGTTAGTCTTGATTTTTCTGATGTTGTCAATCAATCTCCTGCGTTTACTACTCCTCTCTACGTAGGTGTTTCTACCACTACTAACCAACTTAGTGGCGGTTCTTTACGTGATAATAAGATTTATAATAGTGCTTATTCTTCTCTTACTTCTGCTCTCCAGAAAACAAAAGTTTCTGGTCTTGTTGGCACCCTTACCGCTAATACTTTACGTTCTCTAATTGCTGTTTCTCTTTGGCAAGAGAGTAATGCCCTTGTTAACGGAAATTATAACTCTTTAATCGGTGTTCATTTTAAGAATAATCCTAAATATGACACGTTTGAACCTGTTTATATTGGTGGTACTTCTGATTATATTCAGTTTTCAGATGTCCTTCAGACTAGTCCTACATCTGAATCTCCTTTAGGTTCTCAGGCTGGTTTAGGTCGTCTTAATTCTAACGGTTATGTTGGTCGTTTCCATTCGACTGATTACGGCTTTATAATGGGCGTTATGATTGTTTCTCCAGAAGTTGTCTATGCTGATGGTGTTGATAAGTTCTGGACAGATAAAGTACAATCTGACCTTTACTTCCCTGAATTTGCTAACCTTGGATTTCAGCCTATTCTTAATGAGCGTGTTTTTGTTTCAGATAATGACAATGTAAATACTAACCTATTTGGCTATTCCACTCGTTATATTGAATATAAGACTCGTTTGAATAAGGTTTCTGGTCTTTTGCAATTAAAAGATACTGACTTGCTTTTCTCTGCTTATGCTCAAAGTCGCTATTATCCGTCTGCCCCGTCTTTGTCTTTGCAGTTTGTTACTATGTCCCCAATGAATTTGCGTCGTGATTGGTTGTCATATCCTAATCAACCCGCTTTTAAGGTCCAGTTTGCAAGTGATATTACTGCAATTCGTCCACTTCCTTATCAGTGTCAGCCGTCAAGATTAGGAATGTAA

Tertiary structure

PDB ID
4c5ed662d163332ba2a189bdb92e8572717253088971e9a57087ac2541d82faf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4953
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A reference catalog of swine virome He,B. and Tu,C. 2022-12-20 — GenBank