Protein
View in Explore- Genbank accession
- XQO94273.1 [GenBank]
- Protein name
- tail spike protein
- RBP type
-
TFTSPTSPTSP
- Protein sequence
-
MYFIDFEQFGIKDDGTDATSTTNGFVAAFKRAVELGHSAVYVPEGTYLIDAVGVGDYLPEYGGGLQFPSNIEVILHEKALFKVQPNDSTGYACFNLEGIENVTIRGGHIVGDRYEHNYRQDVNENRRTHEWGFGIQVRGSKNVTIENVTIEDCTGDNIWVTSKGMMNWPGVYIPSESVTIRKCRTFRGRRNNIAAGASVGLLIDDCDIIEAGGDEIGPQLGIDLEGYADNSIKYQHPYEINVINCRFKDNGRGSMNINVSGKVNAIGNFCDDYIGYGFSTDVTISNNVITNETGVHKKFGIDSIRKSTSETANRVVVTGNVIRGFQTGIAARGKTVTVSNNILEDISSIGIYPYLCDQAVVSSNIIDSDCLHIWVRESKDIKVNDNKGTGAANSVAIKIDASKDVLLSDNEVSGKGGVRVSRSTNVRIVDNDIDLIGADYGIYFDKQSEVHLRDNLVKNAAFTAIMGYADQYSSYIKGNIIQDCKYMIAMHIDGGSKHMIKDNDITFRRGSNAGYGVYLIGANDSRLHNNDIRVMDGFGLINSFYTIQSTNTKLIGNTYDTGEMKTNDTDFLRYNEKLPK
- Physico‐chemical
properties -
protein length: 580 AA molecular weight: 63898,65920 Da isoelectric point: 5,28122 aromaticity: 0,08966 hydropathy: -0,32345
Domains
Domain architecture
XQO94273.1
1
580 aa
STR 7–576 ·
ATT Attachment Domain
STR Structural Domain
RBD Receptor-Binding Domain
CBM Carbohydrate-Binding Module
LEC Lectin-like Domain
ENZ Enzymatic Domain
CHP Intramolecular Chaperone
LNK Linker/Spacer Domain
TAS Tail-Associated Structural
TTP Tail Tubular Protein
UNK Uncharacterized Domain
Unmapped
Proteins with similar domain architecture
Tail Spike Domain Segmentation
Segmented into three structural domains: N-terminal, central, and C-terminal.
Domain layout
XQO94273.1
1
580 aa
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 18 | 18 | 0,9227 |
| Central domain | 19 | 569 | 552 | 0,9961 |
| C-terminal | 570 | 580 | 10 | 0,4501 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary
C-terminal too short, adjusted boundary
N-terminal
Central domain
C-terminal
View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.
Taxonomy
Coding sequence (CDS)
Genbank protein accession
XQO94273.1
[NCBI]
Genbank nucleotide accession
PV261948.1
[NCBI]
CDS location
range 33075 -> 34817
strand +
strand +
CDS
ATGTACTTCATTGATTTTGAGCAGTTCGGTATCAAGGATGACGGGACAGATGCAACATCAACAACTAATGGGTTCGTAGCAGCGTTTAAAAGGGCCGTAGAACTCGGTCACTCTGCTGTATATGTACCAGAAGGTACTTACTTAATTGACGCTGTAGGCGTTGGTGACTACCTCCCAGAGTACGGAGGAGGTCTTCAGTTCCCATCCAACATTGAAGTTATCCTACATGAGAAAGCCCTTTTTAAAGTACAACCGAATGACTCTACTGGGTACGCTTGTTTTAACTTAGAAGGTATAGAAAATGTAACAATCCGAGGCGGACATATTGTAGGTGACCGTTATGAGCACAATTACAGACAAGACGTAAATGAGAACAGACGTACTCACGAATGGGGATTCGGTATCCAAGTTCGTGGAAGTAAAAATGTTACAATCGAAAATGTAACAATTGAAGACTGCACCGGAGATAACATTTGGGTAACATCTAAAGGTATGATGAACTGGCCGGGAGTGTACATTCCATCTGAAAGCGTAACAATCAGGAAATGTAGAACATTTAGAGGAAGACGAAATAACATTGCTGCCGGAGCAAGCGTAGGTCTACTTATTGATGACTGCGATATTATTGAAGCAGGCGGGGACGAAATTGGACCGCAGCTAGGTATTGACCTTGAAGGATACGCAGACAATAGCATCAAGTACCAGCATCCTTATGAGATAAATGTGATTAACTGCCGATTTAAAGACAATGGAAGAGGTTCTATGAACATCAACGTGTCTGGTAAAGTTAATGCTATCGGTAACTTCTGCGATGATTACATTGGTTACGGGTTTTCAACTGACGTAACTATTAGTAACAACGTTATCACAAACGAAACAGGGGTTCACAAAAAGTTCGGGATAGACTCTATTCGTAAGTCTACTTCGGAAACAGCTAACAGAGTAGTTGTTACTGGCAATGTAATTCGTGGATTTCAAACGGGTATCGCTGCTAGAGGTAAAACGGTTACGGTAAGCAACAACATCCTAGAAGATATTAGTTCTATTGGAATATACCCTTATCTATGCGATCAAGCAGTAGTATCGAGTAATATCATAGACAGCGACTGTCTACATATTTGGGTTAGAGAATCGAAGGATATAAAAGTTAATGACAATAAAGGTACTGGAGCAGCTAACAGTGTAGCTATAAAAATAGACGCCTCTAAAGACGTATTACTAAGCGATAATGAAGTTTCTGGAAAAGGTGGAGTTCGAGTAAGTCGCTCAACAAATGTGAGAATTGTTGATAATGACATTGATCTGATCGGCGCAGACTATGGCATCTACTTTGATAAACAGTCTGAGGTACATCTTAGAGATAACCTTGTTAAAAACGCCGCTTTCACTGCAATCATGGGTTATGCAGATCAGTACAGCAGCTACATAAAAGGAAACATCATTCAAGATTGTAAGTACATGATCGCTATGCACATCGACGGTGGATCAAAACATATGATTAAAGACAATGATATTACATTCCGCAGAGGGTCTAATGCAGGCTATGGTGTCTATTTAATCGGAGCGAATGACTCTCGTTTACATAATAATGATATTAGAGTAATGGATGGGTTTGGCCTTATCAACTCTTTCTACACGATCCAGTCTACGAACACTAAGTTGATAGGGAATACATATGATACAGGTGAGATGAAAACAAACGATACTGATTTCTTACGATATAACGAGAAGCTACCTAAGTAA
Genome Context
Tertiary structure
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Isolation and characterization of the bacteriophage Yucatan specific to Bacillus licheniformis | Bravo-Perez,D., Gonzalez-Gomez,J.P., Castro-Longoria,E., Chaidez-Quiroz,C., Perez-Brito,D.C., Hernandez-Zepeda,C., Minero-Garcia,Y. and Moreno-Valenzuela,O.A. | 2019 | — | GenBank |