Protein

View in Explore
Genbank accession
XQO94273.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MYFIDFEQFGIKDDGTDATSTTNGFVAAFKRAVELGHSAVYVPEGTYLIDAVGVGDYLPEYGGGLQFPSNIEVILHEKALFKVQPNDSTGYACFNLEGIENVTIRGGHIVGDRYEHNYRQDVNENRRTHEWGFGIQVRGSKNVTIENVTIEDCTGDNIWVTSKGMMNWPGVYIPSESVTIRKCRTFRGRRNNIAAGASVGLLIDDCDIIEAGGDEIGPQLGIDLEGYADNSIKYQHPYEINVINCRFKDNGRGSMNINVSGKVNAIGNFCDDYIGYGFSTDVTISNNVITNETGVHKKFGIDSIRKSTSETANRVVVTGNVIRGFQTGIAARGKTVTVSNNILEDISSIGIYPYLCDQAVVSSNIIDSDCLHIWVRESKDIKVNDNKGTGAANSVAIKIDASKDVLLSDNEVSGKGGVRVSRSTNVRIVDNDIDLIGADYGIYFDKQSEVHLRDNLVKNAAFTAIMGYADQYSSYIKGNIIQDCKYMIAMHIDGGSKHMIKDNDITFRRGSNAGYGVYLIGANDSRLHNNDIRVMDGFGLINSFYTIQSTNTKLIGNTYDTGEMKTNDTDFLRYNEKLPK
Physico‐chemical
properties
protein length:580 AA
molecular weight: 63898,65920 Da
isoelectric point:5,28122
aromaticity:0,08966
hydropathy:-0,32345

Domains

Domains [InterPro]
IPR012334
STR
7–368
IPR012334 IPR011050
IPR011050
STR
25–413
IPR011050 IPR006626 IPR006626
IPR006626
Unmapped
99–139
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
IPR007742
CBM
350–505
IPR007742
DC_0453
RBD
354–560
DC_0453
IPR012334
STR
389–576
IPR012334
XQO94273.1
1 580
Architecture
STR
STR 7-576 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XQO94273.1
1 580
Domain Start End Length (AA) Confidence
N-terminal 1 18 18 0,9227
Central domain 19 569 552 0,9961
C-terminal 570 580 10 0,4501
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-18
Central
19-569
C-terminal
570-580

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage vB_BliM_Yucatan
[NCBI] 		3411688 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus licheniformis
[NCBI] 		1402 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQO94273.1 [NCBI]
Genbank nucleotide accession
PV261948.1 [NCBI]
CDS location
range 33075 -> 34817
strand +
CDS
ATGTACTTCATTGATTTTGAGCAGTTCGGTATCAAGGATGACGGGACAGATGCAACATCAACAACTAATGGGTTCGTAGCAGCGTTTAAAAGGGCCGTAGAACTCGGTCACTCTGCTGTATATGTACCAGAAGGTACTTACTTAATTGACGCTGTAGGCGTTGGTGACTACCTCCCAGAGTACGGAGGAGGTCTTCAGTTCCCATCCAACATTGAAGTTATCCTACATGAGAAAGCCCTTTTTAAAGTACAACCGAATGACTCTACTGGGTACGCTTGTTTTAACTTAGAAGGTATAGAAAATGTAACAATCCGAGGCGGACATATTGTAGGTGACCGTTATGAGCACAATTACAGACAAGACGTAAATGAGAACAGACGTACTCACGAATGGGGATTCGGTATCCAAGTTCGTGGAAGTAAAAATGTTACAATCGAAAATGTAACAATTGAAGACTGCACCGGAGATAACATTTGGGTAACATCTAAAGGTATGATGAACTGGCCGGGAGTGTACATTCCATCTGAAAGCGTAACAATCAGGAAATGTAGAACATTTAGAGGAAGACGAAATAACATTGCTGCCGGAGCAAGCGTAGGTCTACTTATTGATGACTGCGATATTATTGAAGCAGGCGGGGACGAAATTGGACCGCAGCTAGGTATTGACCTTGAAGGATACGCAGACAATAGCATCAAGTACCAGCATCCTTATGAGATAAATGTGATTAACTGCCGATTTAAAGACAATGGAAGAGGTTCTATGAACATCAACGTGTCTGGTAAAGTTAATGCTATCGGTAACTTCTGCGATGATTACATTGGTTACGGGTTTTCAACTGACGTAACTATTAGTAACAACGTTATCACAAACGAAACAGGGGTTCACAAAAAGTTCGGGATAGACTCTATTCGTAAGTCTACTTCGGAAACAGCTAACAGAGTAGTTGTTACTGGCAATGTAATTCGTGGATTTCAAACGGGTATCGCTGCTAGAGGTAAAACGGTTACGGTAAGCAACAACATCCTAGAAGATATTAGTTCTATTGGAATATACCCTTATCTATGCGATCAAGCAGTAGTATCGAGTAATATCATAGACAGCGACTGTCTACATATTTGGGTTAGAGAATCGAAGGATATAAAAGTTAATGACAATAAAGGTACTGGAGCAGCTAACAGTGTAGCTATAAAAATAGACGCCTCTAAAGACGTATTACTAAGCGATAATGAAGTTTCTGGAAAAGGTGGAGTTCGAGTAAGTCGCTCAACAAATGTGAGAATTGTTGATAATGACATTGATCTGATCGGCGCAGACTATGGCATCTACTTTGATAAACAGTCTGAGGTACATCTTAGAGATAACCTTGTTAAAAACGCCGCTTTCACTGCAATCATGGGTTATGCAGATCAGTACAGCAGCTACATAAAAGGAAACATCATTCAAGATTGTAAGTACATGATCGCTATGCACATCGACGGTGGATCAAAACATATGATTAAAGACAATGATATTACATTCCGCAGAGGGTCTAATGCAGGCTATGGTGTCTATTTAATCGGAGCGAATGACTCTCGTTTACATAATAATGATATTAGAGTAATGGATGGGTTTGGCCTTATCAACTCTTTCTACACGATCCAGTCTACGAACACTAAGTTGATAGGGAATACATATGATACAGGTGAGATGAAAACAAACGATACTGATTTCTTACGATATAACGAGAAGCTACCTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2cc357d2f4506bda77c5e4c274d9422aa6683b67e8ed4622b9d3ae3e4bc57963
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8937
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of the bacteriophage Yucatan specific to Bacillus licheniformis Bravo-Perez,D., Gonzalez-Gomez,J.P., Castro-Longoria,E., Chaidez-Quiroz,C., Perez-Brito,D.C., Hernandez-Zepeda,C., Minero-Garcia,Y. and Moreno-Valenzuela,O.A. 2019 — GenBank