Protein

View in Explore
Genbank accession
UCS82784.1 [GenBank]
Protein name
non-contractile tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MANVIKTVLTYPLNGSNRDFNIPFEYLARKFVVVTLIGVDRHVLTLNNDYRFATRTTISTNKAWGPADGYTTIEIRRVTSATERLVDFTDGSILRAYDLNVAQIQTMHVAEEARDLTADTIGVNNEGHLDARGRRIVNVANAVDDRDAVPLGQLKGMNEGAWQARNQAQQFRNEAENFKNAAQASAQNAAGSNQSANQHRDDALRFRNEAEAFKNSASTSANTASNAMREAETSAQNAAGSNQAAINSATKAKNEADRAEREASKLANFNDFAAAVENVQDNNVWMKGNFIVRKGITATTGFSVAGGGAVIHGNSAINGATTVNGYLIVNPYEGSTEGGEIRLYGKTKERTGGFIDVDANDNLRVVKDGANGGVKMSFDTNGRVTCHTVLQVNADMTATGKVQAGGGSSYLAPDGNIFGPVWSGGSVHAHMGNNYRRKNAGWIQIRAGACPVNVDIGLGRSVKWHTIWLLGQDAWCPVNIGDDSIYYISFYGGWWRFQIHSNGTVFKLLNHNGPVPAAIIVDNE
Physico‐chemical
properties
protein length:524 AA
molecular weight: 56607,06570 Da
isoelectric point:6,84770
aromaticity:0,08015
hydropathy:-0,39103

Domains

Domains [InterPro]
IPR005604
1–131
IPR005604 Coil Coil G3DSA:2.60.320.30
UCS82784.1
1 524
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_YenP_Rambo
[NCBI] 		2880894 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UCS82784.1 [NCBI]
Genbank nucleotide accession
OK042080.1 [NCBI]
CDS location
range 33781 -> 35355
strand +
CDS
ATGGCTAACGTTATCAAGACCGTTTTGACTTACCCGCTTAATGGTTCGAATAGGGACTTCAATATCCCGTTTGAGTACCTAGCGCGTAAGTTCGTTGTGGTAACTCTTATCGGTGTTGACCGACATGTTTTAACTCTTAATAATGACTATCGATTTGCGACTCGTACCACCATCTCTACGAATAAAGCGTGGGGGCCAGCCGATGGGTACACTACTATCGAGATTCGTCGAGTAACCTCTGCGACTGAACGCTTGGTAGACTTTACGGATGGTTCTATTCTACGTGCGTATGACCTTAACGTTGCTCAGATTCAGACCATGCATGTTGCTGAGGAAGCTCGCGACTTGACTGCGGATACTATCGGCGTGAACAATGAGGGACATTTGGACGCTCGTGGTCGCCGTATTGTGAACGTAGCGAACGCAGTTGATGATCGTGACGCTGTTCCGTTAGGACAACTTAAGGGTATGAATGAGGGTGCGTGGCAAGCTCGTAATCAGGCCCAACAATTCCGTAACGAAGCAGAGAACTTTAAGAACGCTGCTCAGGCAAGCGCTCAGAATGCCGCTGGGTCTAACCAATCAGCTAACCAACATCGTGATGATGCTTTAAGGTTCCGTAATGAGGCCGAAGCGTTTAAGAACTCTGCAAGTACCAGTGCGAATACTGCGAGTAACGCTATGAGAGAAGCTGAGACTTCCGCTCAGAATGCTGCTGGTTCTAACCAAGCTGCAATCAACAGCGCAACTAAAGCTAAGAATGAGGCTGATAGGGCTGAACGTGAAGCATCTAAATTGGCTAACTTCAATGACTTTGCGGCTGCCGTTGAGAACGTTCAGGATAACAATGTCTGGATGAAAGGTAACTTCATTGTGCGTAAGGGCATTACTGCTACCACAGGTTTCAGCGTTGCAGGTGGTGGTGCGGTTATTCATGGGAATTCCGCAATAAACGGTGCGACCACTGTCAACGGCTACCTGATAGTTAACCCTTATGAAGGCTCAACTGAGGGTGGCGAGATTCGATTGTATGGTAAGACTAAGGAGCGAACCGGTGGTTTTATCGATGTAGATGCGAATGATAATCTTCGTGTTGTCAAAGATGGTGCGAACGGTGGAGTGAAGATGTCGTTTGATACCAATGGTAGGGTAACTTGTCATACTGTATTGCAGGTGAACGCTGATATGACTGCGACAGGAAAGGTTCAAGCAGGTGGCGGGTCATCTTACTTGGCTCCTGATGGTAACATCTTCGGGCCTGTCTGGTCTGGTGGTAGTGTACATGCCCATATGGGAAATAACTACCGTAGAAAGAATGCGGGGTGGATACAAATACGAGCAGGAGCGTGTCCAGTCAACGTCGATATCGGACTTGGTAGAAGCGTGAAATGGCACACTATATGGCTATTAGGTCAAGACGCATGGTGTCCTGTGAATATTGGTGATGACTCCATTTACTATATTTCATTCTACGGTGGATGGTGGCGATTCCAAATTCATTCCAATGGGACTGTGTTCAAGCTTCTGAACCACAATGGGCCTGTTCCTGCTGCTATTATTGTGGACAACGAGTAA

Tertiary structure

PDB ID
bbb3884298e684710aee8818943dc6a9d0c238a8e65100d87983eb2814855015
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6933
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Properties of two broad host range phages and the first virulent siphovirus of Yersinia enterocolitica isolated from wild animals Hammerl,J.A. and Hertwig,S. 2021-10-21 — GenBank