Protein

View in Explore
Genbank accession
AZF90573.1 [GenBank]
Protein name
capsid and scaffold protein
RBP type
TF
Evidence RBPdetect2
Probability 0,89
TF
Evidence Phold
Probability 1,00
Protein sequence
MLLTIHDANLQKIGFIDNEKQETLNFYNDTWTRNLGTASSTFEFTVSKKQLLSDTANKPLYNQLNERSFVSFKHKGQTYLFNIMKVEENERWIRCYCENLNLELINEYTNPYKADRPLSFAEYLDVFEIPQFAMVKIGVNEISDQKRTLEWEGQDTKLARLLSLANKFDAEVEFVTQLNDDSSIKQLVLNVYHKADDSHTGVGRIRGDIRLTFEKNIKSMTRKIDKTEVYTLVVPYGKSKESHEGEQEVRVYIDNLPPWEEKDDNGIVIFKQEGVNLYAPHAADLYPSTFGVSTQSNKWIRKDLEVDSDNPNVIRAAGIANLRKHAYPAITYEVDGFIDVEIGDTITIHDKGFTPALDVRARAVEQKISFSNPTNNKTTFGNFKELENRTSGDLRSVFEQMVENIRPYNILVSTDNGVLFKNNTGQSTLRPTLKRGNQVINATYRFVIDGSIVSSGLTYTVKASDITKPTVITISAWVGNKEVASEEVTFLNVSDGKQGPQGPQGPKGADGRTPYIHTAWAYSADGTDRFTTVYPNLNLIDGTRDFSGNWNRAWAWQTDGTYKGLIVKKRTDLWKGIDKTFTAPKNGTYTFSAYIKCSGNTANPARHINLNGFWDRNTYKTYGNNFDWLRDSFSVKLKTGDTIAARYEISGKGTLWTAGHKWEEGSTATPWMPSASEVTTDDYPKYIGQYTNYNQVDSPNPQDYTWSLIRGNDGADGKTPYVHFAYADSADGRTGFSLTQTGSKRYLGVYTDFNQADSTNPSDYTWNDTAGSISVGGRNLLNGSKGPFKPDRKPTTNFDNIGLYQNETSVYLEENKNYIVSAKTDGIFTSTHNPSVDSDNVVLWLYRPWDVWKLISDSKTGTTGTQFIWDHPTGTYHLRVNTYHKEAIKSVWEVKIEEGTVKTDWTPSVDDVQKDIDSKADDALTQAQLNRLSEINSVMKAELEAKASLATVNQWIKAYQDFVNANSADRAQAQKALADASARVVKLENNLNDMSERWNFIDNYMAASNDGLVIGKKDNSSSIMFNPNGRISMFSAGNEVMYISQGVIHIENGIFSKTIQIGRFREEQDFINPDRNVIRYAGGI
Physico‐chemical
properties
protein length:1084 AA
molecular weight: 122262,47300 Da
isoelectric point:5,69421
aromaticity:0,10886
hydropathy:-0,60249

Domains

Domains [InterPro]
IPR007119
57–381
IPR007119 IPR008983 Coil
IPR010572
144–385
IPR010572 IPR008983
AZF90573.1
1 1084
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage CHPC869
[NCBI] 		2365041 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZF90573.1 [NCBI]
Genbank nucleotide accession
MH937464 [NCBI]
CDS location
range 16516 -> 19770
strand +
CDS
ATGTTGCTAACAATTCACGATGCTAATTTGCAGAAGATTGGCTTCATCGATAACGAGAAGCAAGAAACGTTAAATTTCTATAATGATACTTGGACCCGAAACCTTGGAACAGCATCAAGCACGTTCGAGTTTACTGTTTCTAAAAAACAGCTACTTAGCGATACAGCGAATAAGCCGCTTTACAACCAACTAAACGAGCGCTCTTTCGTTTCCTTTAAACACAAAGGTCAGACGTATCTTTTTAATATCATGAAAGTGGAAGAGAATGAGCGATGGATACGTTGCTATTGTGAGAACTTAAACCTTGAGCTGATAAACGAGTACACGAACCCTTACAAGGCTGATAGACCTTTGTCATTTGCGGAGTATCTTGATGTTTTTGAAATTCCTCAGTTTGCGATGGTTAAAATAGGTGTTAATGAGATCTCTGATCAGAAGAGAACGCTCGAGTGGGAAGGGCAGGACACAAAACTGGCAAGGCTCTTAAGCTTGGCCAATAAATTTGACGCTGAAGTTGAATTTGTGACTCAACTTAACGATGACAGTTCAATTAAGCAACTCGTTTTGAACGTTTACCATAAAGCGGACGACTCGCACACTGGTGTGGGTCGAATTCGCGGTGACATTCGTCTGACTTTTGAAAAGAATATCAAATCAATGACGAGAAAGATTGATAAGACTGAAGTTTATACGTTGGTAGTTCCTTATGGAAAATCAAAAGAGAGTCATGAAGGCGAGCAAGAAGTACGTGTATACATTGACAACCTCCCACCTTGGGAGGAAAAGGACGACAATGGTATCGTTATTTTCAAACAAGAGGGCGTAAACCTCTACGCACCTCATGCAGCGGACTTATACCCGTCTACTTTTGGCGTATCAACTCAATCTAATAAATGGATTCGAAAAGACTTAGAGGTTGATAGCGATAATCCAAATGTCATCCGTGCTGCAGGAATTGCAAATTTGCGTAAACACGCATATCCAGCTATCACTTACGAGGTTGACGGTTTTATTGATGTCGAAATTGGGGATACGATAACAATCCACGACAAAGGATTCACACCAGCGCTTGACGTGAGAGCGCGTGCCGTTGAGCAAAAAATTAGCTTCAGCAATCCAACCAACAATAAGACCACTTTCGGAAACTTCAAAGAGCTTGAAAATAGGACATCTGGAGACCTTAGGAGCGTTTTCGAGCAAATGGTTGAGAACATTCGACCATACAATATCCTAGTCTCAACTGATAACGGTGTTTTGTTTAAAAACAATACAGGGCAGTCAACACTACGCCCAACATTAAAACGAGGGAATCAGGTTATTAATGCAACCTATCGATTTGTGATCGATGGCTCTATTGTTAGCTCTGGTCTGACCTATACCGTCAAAGCAAGCGATATCACAAAACCAACTGTAATTACAATTTCAGCGTGGGTAGGTAATAAAGAAGTAGCTTCAGAGGAAGTTACTTTTTTAAATGTTTCAGATGGGAAACAAGGCCCACAAGGACCACAAGGACCTAAAGGAGCAGACGGACGAACACCTTATATCCATACGGCATGGGCTTACAGTGCAGATGGTACAGATAGATTCACAACGGTTTATCCGAACTTGAACTTGATTGATGGTACTAGAGATTTCAGTGGTAATTGGAATAGAGCGTGGGCATGGCAAACTGACGGGACATATAAAGGCTTAATAGTTAAGAAAAGAACAGATTTATGGAAGGGGATTGATAAAACGTTTACTGCACCAAAAAATGGTACTTATACTTTCTCGGCTTATATTAAATGTTCAGGAAACACTGCTAATCCAGCCAGACATATTAATTTAAATGGATTTTGGGATAGAAATACTTATAAGACTTATGGAAATAACTTTGATTGGTTAAGAGATAGCTTTTCTGTAAAACTAAAAACCGGAGATACTATTGCTGCAAGATACGAAATATCAGGAAAAGGCACCTTATGGACTGCTGGTCACAAGTGGGAAGAGGGTTCAACCGCCACTCCTTGGATGCCATCGGCTAGTGAAGTAACAACCGATGATTATCCAAAATATATTGGACAATACACAAACTATAATCAAGTTGATAGTCCCAACCCTCAAGACTATACATGGAGCTTAATTCGAGGTAATGATGGTGCTGATGGTAAAACACCTTATGTTCATTTCGCTTATGCTGATAGTGCAGATGGTAGAACTGGTTTCAGTTTGACACAGACTGGAAGTAAGCGCTATTTAGGTGTGTACACAGATTTCAATCAAGCGGACAGTACTAATCCTTCTGACTACACGTGGAACGATACTGCGGGTAGTATATCTGTTGGTGGCAGGAATCTCTTGAATGGCTCGAAAGGTCCTTTTAAACCTGATCGTAAACCGACAACTAATTTTGATAATATTGGTCTTTACCAAAATGAAACTTCAGTTTATTTAGAGGAAAACAAAAATTACATTGTTAGCGCAAAAACAGATGGCATTTTTACTTCAACCCACAATCCAAGTGTTGATAGTGACAATGTGGTGCTATGGCTATATCGTCCATGGGATGTGTGGAAACTTATATCCGATTCAAAAACAGGTACTACAGGAACGCAGTTTATTTGGGATCATCCGACAGGTACATATCATCTTCGTGTCAATACATATCATAAAGAAGCTATCAAATCTGTTTGGGAAGTGAAGATTGAAGAAGGAACAGTCAAAACAGATTGGACACCTTCTGTCGATGATGTACAAAAAGATATAGACAGTAAGGCTGATGATGCATTAACACAAGCCCAGTTGAATAGATTAAGTGAAATTAATTCGGTGATGAAAGCAGAGCTCGAAGCAAAAGCATCCCTTGCCACTGTTAATCAATGGATTAAGGCTTATCAAGATTTTGTTAACGCAAATAGCGCAGATCGCGCACAAGCTCAAAAGGCTTTGGCAGATGCCAGTGCACGAGTAGTGAAACTAGAAAATAACTTAAACGATATGTCAGAGCGTTGGAATTTTATCGATAACTACATGGCAGCATCAAATGATGGTTTGGTTATCGGGAAGAAAGATAACTCTAGCTCTATCATGTTCAACCCAAACGGTCGTATATCAATGTTTTCAGCTGGTAATGAGGTAATGTATATCTCTCAGGGTGTGATTCACATTGAAAACGGTATTTTTTCTAAGACTATTCAAATTGGACGATTCCGAGAAGAACAAGATTTTATTAATCCGGATCGCAACGTCATCCGCTATGCAGGAGGTATTTAA

Tertiary structure

PDB ID
f278fb6625bebbe2714115ed5ab336d8c6312b07c04f40243d10c559312613bf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7614
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A comparative genomics approach for identifying host-range determinants of bacteriophages infecting Streptococcus thermophilus Szymczak,P., Rau,M.H., Monteiro,J.M., de Pinho,M.G., Filipe,S.R., Vogensen,F.K., Zeidan,A. and Janzen,T. 2019-05-29 — GenBank