Phage RBP Database

Genbank accession

XMN69185.1 [GenBank]

Protein name

distal tail protein Dit

RBP type

TSP

Evidence RBPdetect

Probability 0,89

Protein sequence

MVKIEKVFFNGKELTQYITIASDFHLWQGADFSPQFSDGDILSGSEFYYTKFGKKVISVPFFNCTGSFDDYNQLLRILNVKEPKELRFSSQPYIVFYAIPSGKLDYERITRSAGKGSIDFIIPDGLAHSTYTRTFEFNKNEFGVYEAEIVNDGSEDAYVNYEIKLKKESGYVAITSPYGLLQFGKYDEADGYIDRKNVVVTSNQKGDFANWTDGTTFYENPNKIVTTQMSSDAAFGGRLGLMPSSFTTSGTAGAFGYGACKEYVLETPVEQWYIWARAWFETGLVSQNGEWCLAVIDEDNHLLAGMAIEKNDRTRNEAYVRFLVGDGKGGSIVKKDIKFTPSYWIPPNPYGAQAIDRNSNMFDLVKEKDRVQFFWYGSYFPFPASQLNGKKAKRIQFYVGNYAGSNSTTQQFVTHHYLNDFIFQELHVPYWKDVPNRYPDGAVIEIDGKKANLRSTTKSEKTMKS

Physico‐chemical properties

protein length:	465 AA
molecular weight:	52840,60680 Da
isoelectric point:	5,83034
aromaticity:	0,15484
hydropathy:	-0,44925

Domain architecture

XMN69185.1

1 465 aa

ATT 2–128 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:2.40.30.200
ATT

G3DSA:2.40.30.200

IPR006520
Unmapped

IPR006520

IPR008841
STR

IPR008841

XMN69185.1

1465 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0259
STR

DC_0259

XMN69185.1

1465 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:2.40.30.200	ATT	G3DSA:2.40.30.200	2	128	Merged direct domain	G3DSA:2.40.30.200	N-terminal	Low	Positional only	23 proteins / 23 hits
IPR006520	Unmapped	-	8	128	InterPro	Distal tail protein, N-terminal	-	-	-	-
IPR008841	STR	DC_0499	44	121	InterPro cluster	Siphovirus-type tail component, RIFT-related domain	Central	Low	Positional only	178 proteins / 178 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

XMN69185.1

1 465 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	184	184	0,9588
Central domain	185	387	204	0,7451
C-terminal	388	465	77	0,1580

Note: Constraints were applied during segmentation.
Fixed 9 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Streptococcus phage PY4 [NCBI] · taxon 3390255

Viruses

Host

Streptococcus equinus [NCBI] · taxon 1335

cellular organisms Bacteria Bacillati Bacillota Bacilli Lactobacillales

Genbank protein accession

XMN69185.1 [NCBI]

Genbank nucleotide accession

PQ621715 [NCBI]

CDS location

range 12654 -> 14051
strand +

CDS

GTGGTAAAAATAGAAAAAGTATTTTTTAACGGCAAAGAGCTAACACAATACATTACAATTGCATCTGATTTCCATTTATGGCAAGGAGCGGATTTTAGCCCACAATTTAGCGATGGTGATATTTTAAGCGGTTCGGAGTTTTACTACACCAAATTTGGCAAGAAAGTAATTTCCGTTCCGTTTTTTAATTGCACAGGCTCGTTTGATGATTATAATCAATTACTGCGCATTCTAAACGTTAAAGAACCTAAAGAGCTACGTTTTAGCAGCCAGCCTTACATTGTATTTTATGCAATTCCAAGTGGCAAATTAGATTATGAACGCATTACGCGCAGCGCAGGAAAAGGTTCAATTGATTTTATCATTCCAGACGGTCTTGCTCACTCAACTTATACTAGAACGTTTGAGTTTAACAAAAACGAATTTGGTGTTTACGAAGCTGAAATTGTCAACGACGGCAGCGAGGATGCATACGTCAATTACGAAATCAAACTCAAAAAAGAATCTGGATATGTCGCAATCACAAGCCCTTATGGCTTACTGCAATTTGGTAAGTACGACGAAGCAGACGGCTATATCGACCGCAAAAACGTCGTTGTAACTAGCAACCAAAAAGGTGATTTTGCCAATTGGACAGACGGAACGACGTTTTACGAAAACCCGAACAAAATCGTAACAACACAGATGAGTTCAGACGCTGCTTTTGGTGGTCGTCTCGGTCTTATGCCGTCTAGTTTTACAACGAGCGGAACGGCTGGAGCCTTTGGCTACGGCGCATGTAAAGAGTACGTACTAGAGACACCAGTTGAGCAATGGTACATTTGGGCGAGAGCTTGGTTCGAAACTGGTCTGGTAAGCCAAAACGGTGAATGGTGTCTCGCTGTCATCGACGAAGATAATCATCTTTTGGCAGGTATGGCAATTGAAAAGAATGACCGCACACGTAATGAAGCTTACGTGCGTTTTCTGGTTGGTGACGGCAAAGGTGGAAGTATCGTCAAGAAAGACATCAAATTCACGCCGTCCTATTGGATACCGCCCAACCCGTACGGTGCCCAAGCCATTGACCGCAACTCAAACATGTTTGACCTTGTCAAAGAAAAAGACCGCGTTCAATTCTTCTGGTACGGAAGTTACTTCCCATTCCCAGCCAGCCAATTAAACGGCAAAAAAGCGAAACGCATTCAATTCTACGTTGGTAATTACGCAGGCTCAAACAGCACGACACAGCAATTTGTCACACATCATTATCTAAACGATTTTATTTTCCAAGAGCTACATGTTCCTTATTGGAAAGATGTCCCAAACCGCTACCCAGACGGCGCCGTTATTGAAATCGACGGTAAAAAAGCGAATTTAAGGTCAACAACCAAGTCAGAAAAGACGATGAAATCTTAG

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)