Protein

View in Explore
Genbank accession
ARB07066.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MAEQKYYTLLTKIGMASIANATALGNKVDLVKLQLGDGAGTEYNPTEEQTTLKKVVWEGSVNNVKVDEENPNWIVIETVIPGSVGGFMIREVGIFDSLNQLIAVSKYPETYKPTADSGSVKDLVIKIILVVSNTSSVNLKVDPTVILATLKNIQELDTKIDTTKTELISNIETTKTELNTRIDTENEKQNIKIDQLIAGGSNVASTQTIDIDDWVDDEEGGFKATVTHNLLTQRIVVNIIDATTKENVVTNFRIIDDNSIEIRSETKTELNVYVINGNAETHFINATVDDNRVSEMTTYSSKKITDSIGNIQLVDTSISITDANNRFTSNKLDGVLEEIMVEISGQRTKGITIVNNLIDMI
Physico‐chemical
properties
protein length:361 AA
molecular weight: 39718,32120 Da
isoelectric point:4,55811
aromaticity:0,04432
hydropathy:-0,19197

Domains

View on InterPro
Domain architecture
ARB07066.1
1 361 aa
ATT 3–150 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Clostridioides phage phiSemix9P1 [NCBI] · taxon 1971232
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Clostridioides difficile [NCBI] · taxon 1496
cellular organisms Bacteria Bacillati Bacillota Clostridia Peptostreptococcales

Coding sequence (CDS)

Genbank protein accession
ARB07066.1 [NCBI]
Genbank nucleotide accession
KX905163.1 [NCBI]
CDS location
range 17577 -> 18662
strand +
CDS
TTGGCAGAACAAAAATATTATACCCTTTTAACAAAGATAGGTATGGCATCTATTGCAAATGCTACAGCACTTGGCAATAAAGTAGATTTGGTGAAATTACAACTTGGTGATGGAGCAGGAACAGAATATAATCCAACAGAAGAGCAGACAACACTTAAAAAAGTAGTTTGGGAAGGTTCTGTAAACAATGTAAAAGTAGATGAAGAAAATCCTAACTGGATAGTAATAGAAACTGTAATACCAGGTAGCGTTGGTGGATTTATGATAAGGGAAGTAGGTATATTTGACTCGTTAAATCAATTAATTGCAGTATCTAAATATCCTGAAACATATAAACCAACTGCTGATTCGGGAAGTGTAAAAGATTTAGTTATAAAAATTATTTTAGTAGTTTCTAACACTTCAAGCGTGAATTTAAAAGTAGACCCAACTGTTATTTTAGCGACTTTAAAAAACATACAAGAGTTAGACACTAAAATAGATACAACTAAAACAGAGTTAATAAGTAACATAGAAACTACTAAGACAGAGTTAAACACTAGAATTGACACAGAAAATGAGAAACAAAATATCAAAATTGACCAGCTAATAGCAGGGGGTTCTAATGTAGCATCTACTCAAACAATAGATATTGATGATTGGGTAGATGATGAAGAAGGTGGATTCAAGGCAACTGTAACACATAACTTATTAACACAAAGAATAGTTGTAAATATTATAGATGCTACTACAAAAGAGAATGTAGTTACAAACTTTAGGATTATAGATGATAATTCTATTGAAATTAGAAGTGAGACAAAAACTGAGTTAAATGTTTATGTGATAAATGGGAATGCAGAGACTCATTTTATTAATGCGACCGTTGATGATAATAGAGTGAGTGAAATGACTACTTATTCATCTAAAAAGATAACTGATTCTATTGGTAATATACAACTTGTAGATACCAGTATAAGTATTACAGATGCTAATAATAGATTTACAAGTAATAAGTTAGATGGGGTATTAGAAGAAATAATGGTAGAAATAAGTGGCCAAAGGACTAAAGGAATTACTATAGTAAATAATTTAATAGATATGATATAA

Genome Context

Tertiary structure

ARB07066.1
ESMFold structure
Source ESMFold
pLDDT 84.7
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
A Clostridioides difficile bacteriophage genome encodes functional binary toxin-associated genes Riedel,T., Wittmann,J., Bunk,B., Schober,I., Sproer,C., Gronow,S. and Overmann,J. 2017 28216103 GenBank