Protein

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Genbank accession
ARB07066.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,93
Seq2Symm
C3 confidence 0,656
C3 0,656
C2 0,066
C4 0,016
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MAEQKYYTLLTKIGMASIANATALGNKVDLVKLQLGDGAGTEYNPTEEQTTLKKVVWEGSVNNVKVDEENPNWIVIETVIPGSVGGFMIREVGIFDSLNQLIAVSKYPETYKPTADSGSVKDLVIKIILVVSNTSSVNLKVDPTVILATLKNIQELDTKIDTTKTELISNIETTKTELNTRIDTENEKQNIKIDQLIAGGSNVASTQTIDIDDWVDDEEGGFKATVTHNLLTQRIVVNIIDATTKENVVTNFRIIDDNSIEIRSETKTELNVYVINGNAETHFINATVDDNRVSEMTTYSSKKITDSIGNIQLVDTSISITDANNRFTSNKLDGVLEEIMVEISGQRTKGITIVNNLIDMI
Physico‐chemical
properties
protein length:361 AA
molecular weight: 39718,32120 Da
isoelectric point:4,55811
aromaticity:0,04432
hydropathy:-0,19197

Domains

View on InterPro
Domain architecture
ARB07066.1
1 361 aa
ATT 3–150 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Clostridioides phage phiSemix9P1 [NCBI] · taxon 1971232
Uroviricota Caudoviricetes Clostridioides phage phiSemix9P1
Host
Clostridioides difficile [NCBI] · taxon 1496
Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Clostridioides Clostridioides difficile

Coding sequence (CDS)

Genbank protein accession
ARB07066.1 [NCBI]
Genbank nucleotide accession
KX905163.1 [NCBI]
CDS location
range 17577 -> 18662
strand +
CDS
TTGGCAGAACAAAAATATTATACCCTTTTAACAAAGATAGGTATGGCATCTATTGCAAATGCTACAGCACTTGGCAATAAAGTAGATTTGGTGAAATTACAACTTGGTGATGGAGCAGGAACAGAATATAATCCAACAGAAGAGCAGACAACACTTAAAAAAGTAGTTTGGGAAGGTTCTGTAAACAATGTAAAAGTAGATGAAGAAAATCCTAACTGGATAGTAATAGAAACTGTAATACCAGGTAGCGTTGGTGGATTTATGATAAGGGAAGTAGGTATATTTGACTCGTTAAATCAATTAATTGCAGTATCTAAATATCCTGAAACATATAAACCAACTGCTGATTCGGGAAGTGTAAAAGATTTAGTTATAAAAATTATTTTAGTAGTTTCTAACACTTCAAGCGTGAATTTAAAAGTAGACCCAACTGTTATTTTAGCGACTTTAAAAAACATACAAGAGTTAGACACTAAAATAGATACAACTAAAACAGAGTTAATAAGTAACATAGAAACTACTAAGACAGAGTTAAACACTAGAATTGACACAGAAAATGAGAAACAAAATATCAAAATTGACCAGCTAATAGCAGGGGGTTCTAATGTAGCATCTACTCAAACAATAGATATTGATGATTGGGTAGATGATGAAGAAGGTGGATTCAAGGCAACTGTAACACATAACTTATTAACACAAAGAATAGTTGTAAATATTATAGATGCTACTACAAAAGAGAATGTAGTTACAAACTTTAGGATTATAGATGATAATTCTATTGAAATTAGAAGTGAGACAAAAACTGAGTTAAATGTTTATGTGATAAATGGGAATGCAGAGACTCATTTTATTAATGCGACCGTTGATGATAATAGAGTGAGTGAAATGACTACTTATTCATCTAAAAAGATAACTGATTCTATTGGTAATATACAACTTGTAGATACCAGTATAAGTATTACAGATGCTAATAATAGATTTACAAGTAATAAGTTAGATGGGGTATTAGAAGAAATAATGGTAGAAATAAGTGGCCAAAGGACTAAAGGAATTACTATAGTAAATAATTTAATAGATATGATATAA

Genome Context

Tertiary structure

ARB07066.1
ESMFold structure
Source ESMFold
pLDDT 84.7
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
A Clostridioides difficile bacteriophage genome encodes functional binary toxin-associated genes Riedel,T., Wittmann,J., Bunk,B., Schober,I., Sproer,C., Gronow,S. and Overmann,J. 2017 28216103 GenBank