Protein

View in Explore
Genbank accession
ARB07066.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MAEQKYYTLLTKIGMASIANATALGNKVDLVKLQLGDGAGTEYNPTEEQTTLKKVVWEGSVNNVKVDEENPNWIVIETVIPGSVGGFMIREVGIFDSLNQLIAVSKYPETYKPTADSGSVKDLVIKIILVVSNTSSVNLKVDPTVILATLKNIQELDTKIDTTKTELISNIETTKTELNTRIDTENEKQNIKIDQLIAGGSNVASTQTIDIDDWVDDEEGGFKATVTHNLLTQRIVVNIIDATTKENVVTNFRIIDDNSIEIRSETKTELNVYVINGNAETHFINATVDDNRVSEMTTYSSKKITDSIGNIQLVDTSISITDANNRFTSNKLDGVLEEIMVEISGQRTKGITIVNNLIDMI
Physico‐chemical
properties
protein length:361 AA
molecular weight: 39718,32120 Da
isoelectric point:4,55811
aromaticity:0,04432
hydropathy:-0,19197

Domains

Domains [InterPro]
IPR022225
ATT
3–150
IPR022225 Coil
IPR051934
Unmapped
4–238
IPR051934
DC_0386
STR
4–361
DC_0386
ARB07066.1
1 361
Architecture
ATT
STR
ATT 3-150 | STR 151-361
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridioides phage phiSemix9P1
[NCBI] 		1971232 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridioides difficile
[NCBI] 		1496 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Peptostreptococcales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARB07066.1 [NCBI]
Genbank nucleotide accession
KX905163.1 [NCBI]
CDS location
range 17577 -> 18662
strand +
CDS
TTGGCAGAACAAAAATATTATACCCTTTTAACAAAGATAGGTATGGCATCTATTGCAAATGCTACAGCACTTGGCAATAAAGTAGATTTGGTGAAATTACAACTTGGTGATGGAGCAGGAACAGAATATAATCCAACAGAAGAGCAGACAACACTTAAAAAAGTAGTTTGGGAAGGTTCTGTAAACAATGTAAAAGTAGATGAAGAAAATCCTAACTGGATAGTAATAGAAACTGTAATACCAGGTAGCGTTGGTGGATTTATGATAAGGGAAGTAGGTATATTTGACTCGTTAAATCAATTAATTGCAGTATCTAAATATCCTGAAACATATAAACCAACTGCTGATTCGGGAAGTGTAAAAGATTTAGTTATAAAAATTATTTTAGTAGTTTCTAACACTTCAAGCGTGAATTTAAAAGTAGACCCAACTGTTATTTTAGCGACTTTAAAAAACATACAAGAGTTAGACACTAAAATAGATACAACTAAAACAGAGTTAATAAGTAACATAGAAACTACTAAGACAGAGTTAAACACTAGAATTGACACAGAAAATGAGAAACAAAATATCAAAATTGACCAGCTAATAGCAGGGGGTTCTAATGTAGCATCTACTCAAACAATAGATATTGATGATTGGGTAGATGATGAAGAAGGTGGATTCAAGGCAACTGTAACACATAACTTATTAACACAAAGAATAGTTGTAAATATTATAGATGCTACTACAAAAGAGAATGTAGTTACAAACTTTAGGATTATAGATGATAATTCTATTGAAATTAGAAGTGAGACAAAAACTGAGTTAAATGTTTATGTGATAAATGGGAATGCAGAGACTCATTTTATTAATGCGACCGTTGATGATAATAGAGTGAGTGAAATGACTACTTATTCATCTAAAAAGATAACTGATTCTATTGGTAATATACAACTTGTAGATACCAGTATAAGTATTACAGATGCTAATAATAGATTTACAAGTAATAAGTTAGATGGGGTATTAGAAGAAATAATGGTAGAAATAAGTGGCCAAAGGACTAAAGGAATTACTATAGTAAATAATTTAATAGATATGATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a0c6a0bbd1ca0cfa046769e5b765590a20d8fec7c2c74ced330018d64e5e91c2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8465
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A Clostridioides difficile bacteriophage genome encodes functional binary toxin-associated genes Riedel,T., Wittmann,J., Bunk,B., Schober,I., Sproer,C., Gronow,S. and Overmann,J. 2017 28216103 GenBank