Phage RBP Database

Genbank accession

UVD42807.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,73

TF

Evidence RBPdetect2

Probability 0,42

Protein sequence

MANKILRLDISKIPDLTPIIYGRVADGLVQTVDVYVTNNGEPFDLTGWVINFEGNTSGNRTYVKDLEGIVMVDRTKGHFTYTFPLIAFSTAGKYERAYFSFVKGDQRESTSDFNIQVFENADITVEEAHTVITEYEELVDELNRIFLEAQTELQQDFDEFKKNYDTRYNNYITDLTNKINAAQNKIDILNSNYEKTNAKLTDLEERMNDLVNDGLLKMEDVLSFLAGKNVKIKVPIDFAGKISGSTAENPNVMKFGTIPAANINSVGTVNDGTELISDDVAATMWKNYKNVSALDGKLAQAQQTLNGQVTFHLARIDAVSEISRRFPNLFINVGATTRSQQKEQLIKKATFVSATAYGFGSVGDVYKYTIGRSNWTTTGTTWQGWTGWGIDNNSHSSSKPDPVTAGVGSVDTIMDQNGVMAFIMGVPTPSDGTKMLRTNLDYFVCEITLNLNINDLIPKPDLSKYYTKDEMNEAFTEHSLYSNSLDFGNYDYSGNANLMTPLKASDFYKVTGGTIEDIGNALKVTFTKTDGATFLETMKSVPALLPNKQYTLSADVTVTEGYSGKLENLRLGYRKSPNGTIILPLTAKDAQVGKKTKIFITANSSSATDPSIFDRMYFTINTTSTEPFVGTVLIENIKVEEGSTATPYQPNLLDEPYYLSKAVWGENLIDPAVKFPITSSVETLYSGRTPEDFVEGETYTVTIGATKPSAQSFGVYLALKNHTIFKPVEGLHNTWTATLKIDILGEKKNAVYIYQSPASSVGACQIDWLKIEKGDTRTPNLNAPFKYKGIGFTKSSNPKDYNWNSAPENVDFIEKNAASNEAKIDEIDKNVVKTSGNQNITGLKNFTGTLQSSGVEVAKKGDSYTKTETYTKTEVDSKYIPKTQENTFVKTIGNQNVVGTKNFSDPRKNDALMYALTDEAMRPSDFNFAGDFTKVMTARSMRVMQRRLPWMKTFGWFGTGEGSANDIDEGFKQYIQTNSTTDADITNYQFIRKGRKVQFFARIKFTSATGTDVATFAQVPTGFRLSNAAKYTYWNVPLTCVQFNAPERINYKGFVERLGTNNIKIGTATYTGNTYWYGEWETSDPYPTSFTDEVTERMMAHRGATVSYPENTLEAFKAAIDLGYGGVELDPRLTSDGKLYLMHDDTVDRTTNGTGNFADLTEAQVKALNIKIDPVKYPNLVGQTLKVPSLSSVLLALRGTDLTINFDGSKIDLSVASTAKMIHDMIVSYGLEKRVFFVINNKTQRDAFHKLYPQYPVSWLWNSPGSRAAGTVNEIYAYGKHGGALLSIPMAVLNDDTSMRDIQASGVYYQVYGVQTEADYETCRLMRVPMIETDQLYPNLDFL

Physico‐chemical properties

protein length:	1343 AA
molecular weight:	149376,09590 Da
isoelectric point:	5,30856
aromaticity:	0,10648
hydropathy:	-0,38325

Domain architecture

UVD42807.1

1 1343 aa

ATT 1–143 · STR 815–854 · STR 1082–1343

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:2.60.40.3350
ATT

G3DSA:2.60.40.3350 Coil Coil G3DSA:6.10.140.2190 IPR017946

IPR018913
ATT

IPR018913 IPR030395

PTHR46211
Unmapped

PTHR46211

IPR017946
STR

IPR017946

cd08566
ENZ

cd08566

IPR030395
ENZ

IPR030395

UVD42807.1

11343 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1249
STR

DC_1249 DC_0134

DC_1746
STR

DC_1746

UVD42807.1

11343 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:2.60.40.3350	ATT	G3DSA:2.60.40.3350	1	122	Merged direct domain	G3DSA:2.60.40.3350	N-terminal	Low	Positional only	41 proteins / 41 hits
IPR018913	ATT	DC_0557	4	143	InterPro cluster	BppU, N-terminal	Central	Medium	Text match	333 proteins / 333 hits
Coil	Unmapped	-	125	152	Coils	Coil	-	-	-	-
Coil	Unmapped	-	172	213	Coils	Coil	-	-	-	-
G3DSA:6.10.140.2190	STR	G3DSA:6.10.140.2190	815	854	Merged direct domain	G3DSA:6.10.140.2190	Central	Low	Positional only	15 proteins / 15 hits
IPR017946	STR	IPR017946	1082	1342	Merged direct domain	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily	Central	Low	Positional only	31 proteins / 31 hits
IPR030395	ENZ	DC_0002	1096	1343	InterPro cluster	Glycerophosphodiester phosphodiesterase domain	Central	High	Text match	63 proteins / 165 hits
PTHR46211	Unmapped	-	1097	1335	PANTHER	GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE	-	-	-	-
IPR017946	STR	IPR017946	1099	1336	Merged direct domain	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily	Central	Low	Positional only	31 proteins / 31 hits
cd08566	ENZ	DC_0002	1099	1299	InterPro cluster	cd08566	Central	High	Text match	63 proteins / 165 hits
IPR030395	ENZ	DC_0002	1101	1335	InterPro cluster	Glycerophosphodiester phosphodiesterase domain	Central	High	Text match	63 proteins / 165 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

UVD42807.1

1 1343 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	326	326	0,9969
Central domain	327	749	424	0,7398
C-terminal	750	1343	593	0,2112

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Enterococcus phage TJE4 [NCBI] · taxon 2951264

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Enterococcus faecium [NCBI] · taxon 1352

cellular organisms Bacteria Bacillati Bacillota Bacilli Lactobacillales

Genbank protein accession

UVD42807.1 [NCBI]

Genbank nucleotide accession

ON506926.1 [NCBI]

CDS location

range 70413 -> 74444
strand +

CDS

ATGGCAAATAAGATATTACGTCTTGACATTTCAAAAATTCCAGATTTGACTCCTATCATCTATGGGCGGGTCGCTGATGGACTCGTCCAAACTGTTGATGTATATGTCACGAATAATGGAGAGCCTTTTGACCTAACAGGTTGGGTCATTAACTTTGAAGGTAACACAAGTGGGAACCGAACATATGTAAAAGATCTTGAAGGAATCGTTATGGTTGATCGCACAAAAGGTCATTTTACTTACACATTTCCACTGATCGCTTTTTCAACAGCTGGAAAATATGAACGAGCATATTTTTCATTTGTGAAAGGAGATCAAAGAGAATCGACTTCAGACTTTAACATTCAAGTATTCGAAAATGCAGACATCACTGTTGAGGAAGCTCATACAGTCATTACAGAATATGAAGAATTGGTTGATGAATTAAATCGTATTTTCTTGGAAGCACAAACTGAATTACAACAAGACTTCGATGAGTTCAAGAAAAATTACGATACGAGGTACAATAACTACATTACTGATCTTACGAATAAGATTAATGCGGCTCAGAATAAAATCGATATTTTAAACAGTAATTACGAGAAAACTAACGCAAAACTCACTGATCTAGAAGAAAGAATGAACGATTTAGTGAATGATGGGTTACTAAAAATGGAAGATGTGCTTTCATTTTTAGCTGGTAAAAATGTTAAAATTAAGGTTCCTATCGATTTCGCTGGAAAAATTTCAGGTTCAACTGCAGAAAATCCTAACGTAATGAAGTTTGGCACAATACCCGCAGCGAATATAAACTCTGTAGGAACAGTGAACGATGGAACGGAATTAATTTCTGATGATGTAGCAGCAACAATGTGGAAGAACTATAAAAATGTTTCTGCATTAGATGGAAAACTTGCTCAAGCACAACAAACGCTAAATGGTCAAGTCACTTTTCATTTAGCAAGAATTGATGCAGTGTCAGAAATAAGTCGTCGTTTTCCAAACTTATTCATCAATGTAGGAGCGACTACTCGTTCACAACAAAAAGAACAATTAATAAAGAAAGCTACTTTTGTTAGTGCAACTGCTTATGGCTTCGGATCAGTAGGAGATGTATATAAATATACAATTGGCCGATCTAACTGGACGACAACTGGAACGACTTGGCAAGGTTGGACTGGTTGGGGCATTGATAATAATAGTCACAGTTCTTCCAAACCCGATCCTGTAACAGCAGGTGTTGGATCCGTTGACACAATAATGGATCAAAATGGTGTAATGGCTTTTATTATGGGCGTACCTACCCCATCAGATGGAACAAAAATGTTAAGAACTAATTTAGATTATTTCGTTTGTGAAATAACTTTAAATTTAAACATTAACGACCTAATTCCTAAGCCTGACTTAAGTAAGTATTACACTAAGGATGAAATGAATGAAGCATTCACTGAACATTCATTATATTCTAACTCATTGGATTTTGGCAATTATGATTATTCAGGAAATGCTAACTTAATGACTCCTCTAAAAGCTAGTGATTTTTATAAAGTTACTGGTGGTACTATAGAAGATATAGGAAATGCATTAAAAGTAACTTTCACAAAAACTGATGGTGCTACTTTTTTAGAAACTATGAAGAGTGTTCCAGCTTTACTTCCTAACAAACAATACACGTTAAGTGCAGATGTTACGGTTACGGAAGGTTATTCTGGGAAGTTAGAAAATTTAAGGTTAGGATATAGAAAAAGCCCTAACGGGACAATCATATTGCCATTGACGGCTAAAGATGCGCAAGTCGGAAAGAAGACGAAAATATTCATCACGGCAAATTCGAGTTCGGCAACCGATCCATCGATTTTCGATAGAATGTATTTCACGATCAATACAACATCAACAGAGCCTTTTGTCGGAACTGTTTTAATCGAAAATATCAAAGTCGAAGAAGGTTCGACAGCAACGCCTTATCAGCCTAATTTACTAGATGAGCCATATTATTTGAGTAAGGCGGTGTGGGGTGAGAATCTTATTGACCCTGCAGTGAAGTTTCCTATAACATCAAGTGTTGAAACGTTATACTCAGGTAGAACTCCTGAAGATTTCGTTGAAGGGGAGACGTACACTGTGACCATAGGTGCAACAAAACCTTCCGCTCAATCTTTTGGAGTATATTTAGCGTTAAAAAATCACACCATATTCAAACCGGTTGAGGGTCTGCATAATACATGGACGGCTACCCTAAAAATAGATATTTTAGGAGAAAAGAAAAATGCTGTGTACATTTACCAATCTCCAGCGTCAAGTGTTGGTGCATGCCAAATTGACTGGCTCAAAATCGAAAAAGGTGACACACGAACTCCTAATTTAAATGCCCCTTTTAAATATAAAGGAATTGGTTTTACTAAGTCATCTAATCCTAAAGATTATAATTGGAACAGTGCTCCCGAAAATGTAGATTTCATTGAAAAAAATGCAGCTTCAAATGAAGCAAAAATTGATGAAATTGATAAGAATGTAGTGAAAACTTCAGGTAATCAAAATATTACCGGCCTTAAAAACTTTACAGGTACGCTCCAAAGCAGCGGAGTAGAAGTTGCCAAAAAAGGTGATTCATATACGAAAACTGAAACGTATACGAAAACTGAAGTCGATTCAAAATACATTCCAAAAACACAAGAAAATACATTCGTAAAAACTATTGGAAATCAAAATGTTGTAGGAACAAAAAATTTCAGTGATCCAAGAAAAAATGATGCTTTAATGTATGCTCTTACTGATGAAGCAATGCGCCCATCAGATTTTAACTTCGCTGGTGATTTTACTAAAGTTATGACAGCGCGCTCAATGAGAGTTATGCAAAGACGTTTACCTTGGATGAAAACATTTGGTTGGTTTGGAACGGGTGAAGGATCAGCGAATGATATTGACGAAGGATTTAAGCAATACATTCAAACGAACTCAACAACAGATGCTGACATCACTAATTATCAATTCATTAGAAAAGGACGGAAAGTACAATTCTTTGCCAGAATTAAATTTACTAGTGCCACAGGAACAGATGTTGCTACTTTTGCGCAAGTTCCTACTGGTTTTCGCTTAAGCAATGCAGCAAAATATACTTATTGGAATGTTCCTTTAACATGTGTTCAATTTAATGCTCCAGAACGCATTAATTATAAAGGTTTCGTTGAACGACTGGGTACAAACAATATTAAAATTGGTACAGCAACTTACACAGGAAATACTTATTGGTATGGAGAATGGGAAACATCTGATCCTTACCCAACAAGTTTTACTGATGAAGTAACTGAGCGAATGATGGCTCATCGAGGAGCTACGGTGTCATATCCTGAAAATACTCTTGAGGCATTTAAAGCTGCGATTGACTTAGGTTATGGCGGAGTAGAATTGGATCCTCGTTTAACTAGCGATGGAAAATTATATTTAATGCATGATGACACTGTTGATCGAACAACTAATGGAACAGGCAATTTTGCCGATTTAACAGAAGCTCAAGTTAAAGCGTTAAATATTAAAATCGATCCAGTAAAATATCCTAACCTTGTTGGTCAAACACTTAAAGTTCCTTCATTATCATCTGTTCTTTTAGCATTGAGAGGAACAGATTTAACAATTAATTTCGATGGAAGTAAAATTGACTTAAGCGTTGCATCAACTGCAAAAATGATTCATGATATGATTGTAAGTTATGGTTTAGAAAAACGAGTATTCTTCGTTATCAATAATAAAACACAACGAGATGCTTTTCATAAGCTTTATCCTCAATATCCTGTTTCATGGCTTTGGAATAGCCCAGGATCTAGAGCTGCTGGAACAGTAAATGAAATTTATGCATATGGAAAACATGGAGGAGCACTCCTTTCAATTCCTATGGCTGTCTTAAATGATGATACATCTATGAGAGACATTCAAGCATCAGGTGTTTATTATCAGGTTTATGGTGTTCAGACTGAAGCTGATTATGAAACATGTAGATTAATGCGTGTTCCTATGATCGAAACTGATCAACTATATCCTAATTTAGATTTTTTATAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)