Protein

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Genbank accession
YP_010081102.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,41
Seq2Symm
C1 confidence 0,992
C1 0,992
C3 0,005
C2 0,002
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MFSWLNFEELLIHNPVELINPSKDIISVAMSKKQYIEFFSNKYTYNGLYYDEEMDFCLFYYADPLQSYKEGDVYAQGYIDVEMKIYRVKWLCNVSISLSSGLLQSTDGTQGVAQEGGKYTHTAWAYSSDGADRFSTVYPRFNLLEGSKDFSGDWWNSTAWDKNGTYNGLTVMSYNGNYNAGIAKGFTIPSDGIYSLSMIVKVKTGCVGKFIVETYKPTTIPPVIIDVTDTGGKFVIQSYTGSFKAGQEIAMYFRFNNGAIVKGCLEVAGHKIEHGETPTPYMQSENETTKADRPSYIGQYTDYTLEDSTNPSSYTWREIREDKWNVTKTGMLVSPQNKQITMVQAGVLMNCGINNNISGWTDGTTQLNYSGQDFIIDGYGMRGLHNG
Physico‐chemical
properties
protein length:387 AA
molecular weight: 43493,20950 Da
isoelectric point:5,01231
aromaticity:0,13695
hydropathy:-0,39561

Taxonomy

Phage
Lactococcus phage CHPC116 [NCBI] · taxon 2675238
Uroviricota Caudoviricetes Ceduovirus Ceduovirus CHPC116
Host
Lactococcus lactis [NCBI] · taxon 1358
Bacillota Bacilli Lactobacillales Streptococcaceae Lactococcus Lactococcus lactis

Coding sequence (CDS)

Genbank protein accession
YP_010081102.1 [NCBI]
Genbank nucleotide accession
NC_055006 [NCBI]
CDS location
range 18997 -> 20160
strand +
CDS
ATGTTTTCATGGTTAAATTTCGAGGAGTTATTAATTCACAACCCTGTTGAGTTGATAAACCCTAGTAAAGATATAATAAGCGTAGCTATGAGCAAAAAACAGTATATAGAGTTTTTCAGTAACAAATATACTTATAACGGTCTATATTATGACGAAGAAATGGACTTCTGTCTGTTTTATTATGCTGACCCCTTACAGAGCTACAAAGAGGGCGATGTGTACGCTCAAGGATATATTGATGTAGAGATGAAGATATACCGTGTAAAATGGTTGTGTAACGTTTCTATTAGTCTTTCTAGTGGTTTATTACAATCTACTGACGGAACGCAAGGAGTAGCACAAGAGGGTGGAAAATACACTCACACAGCGTGGGCTTATAGTTCAGACGGTGCAGATAGATTTTCAACTGTTTATCCTAGATTCAATCTATTGGAGGGAAGTAAAGACTTCAGTGGCGATTGGTGGAATTCAACCGCTTGGGACAAGAACGGTACTTATAATGGCTTGACTGTGATGTCATATAACGGAAATTATAACGCAGGTATAGCTAAAGGTTTTACTATTCCCTCAGACGGTATTTATTCACTTTCTATGATTGTTAAAGTAAAAACTGGTTGTGTCGGTAAATTTATTGTTGAAACATATAAACCCACAACAATACCTCCTGTTATAATAGATGTAACCGATACAGGCGGAAAATTTGTAATTCAGTCTTATACAGGTAGTTTTAAAGCAGGCCAAGAGATTGCAATGTATTTTCGATTTAATAATGGAGCTATTGTTAAAGGTTGTTTAGAGGTCGCAGGACATAAAATTGAACACGGAGAAACACCAACTCCTTACATGCAAAGCGAAAACGAAACAACAAAAGCAGACCGTCCTAGCTACATCGGTCAATATACAGATTACACGCTAGAAGATAGTACAAACCCTAGTTCTTACACTTGGAGAGAAATACGAGAGGACAAATGGAACGTTACAAAAACAGGTATGCTTGTAAGTCCACAAAATAAACAAATTACAATGGTTCAAGCAGGGGTATTAATGAACTGTGGAATTAATAACAACATTTCAGGTTGGACGGACGGAACAACGCAATTAAATTATAGCGGTCAAGATTTTATAATTGACGGTTACGGAATGAGAGGGCTACACAATGGATAG

Genome Context

Tertiary structure

YP_010081102.1
ESMFold2 structure
Source ESMFold2
pLDDT 64.2
Oligomeric state monomer
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