Protein

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Genbank accession
CAB4122841.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
TSP
Evidence RBPdetect2
Probability 0,93
TF
Evidence Phold
Probability 1,00
Protein sequence
MSNKNLVQTTPMPSPSDSYSASHESNKNRIIDQNFSYWINKTNQLLYYTAPYTGSSTITVASKLSDIVSVKDFGAVGDGTTDDTAAFTKAEAASETTIYIPDGTYSTTLNASQLLKTYFGPGTILQSGGAKLPNYFTYTNSAPATSSNPGNVTNAFGGVSKSPLRYQSYVVGAATAGTPTTGYVTAYDLSQLQLNMYVTAGHNQSTSDTPGRTMIGQQYNYTVMAGQGDASGLLFGGYVSNSNDSRFTGTISGATLTISGLTGAALAVGKYVYGQGVTAGTQITGGSGTSWTVNNSQIIGPISMNANITSSWLADPALTAIAGEYDATSNGVNVVSAELTTRDNGYYATMSGYGSHIYRSVLPSPNPKAFVCVNFSATSNDSQPVDAFYYGHGKSKIGLDFSTADFSSNSGAAFTFAANQYSYYNCTNTSVASTPEGTVLGNIYSGYQSASSAYVIVNVNTTLRVNTYGVVISNAPLFTSGQVNAIRVVTASGGVTVTQVDQVVVINKTVGAATAVTLPTAPNTGTIFTIKDGKGDAAANNITISGAVNIDGSASYAINTNYGKVSVVYNGTIWNVIA
Physico‐chemical
properties
protein length:578 AA
molecular weight: 60036,40340 Da
isoelectric point:5,55814
aromaticity:0,10035
hydropathy:-0,08304

Domains

Domains [InterPro]
IPR012334
53–160
IPR012334
IPR011050
62–548
IPR011050
IPR024535
67–256
IPR024535
CAB4122841.1
1 578
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4122841.1 [NCBI]
Genbank nucleotide accession
LR796165 [NCBI]
CDS location
range 37470 -> 39206
strand +
CDS
ATGAGCAATAAAAATCTTGTTCAAACCACACCGATGCCGTCGCCCTCGGATTCGTATTCCGCTAGCCATGAATCAAACAAAAATAGAATTATAGACCAGAATTTTTCCTACTGGATAAATAAAACAAACCAACTTTTATACTACACCGCACCGTATACAGGCTCCTCAACAATAACCGTGGCGTCTAAGCTGTCGGATATTGTTAGTGTGAAGGATTTTGGTGCGGTCGGCGACGGCACAACAGACGACACTGCGGCGTTTACCAAAGCCGAAGCTGCATCAGAAACGACAATTTATATTCCTGACGGCACATATTCCACGACGCTTAATGCGTCTCAACTTCTGAAGACTTACTTCGGCCCCGGAACGATCCTGCAAAGCGGCGGTGCAAAACTGCCGAACTATTTTACCTATACAAACTCGGCTCCCGCGACTTCGAGCAATCCGGGGAACGTAACTAACGCATTTGGCGGCGTGTCTAAATCGCCTCTGCGCTATCAATCCTATGTGGTCGGCGCGGCCACTGCTGGAACGCCCACGACGGGATACGTAACGGCGTATGACCTGTCTCAGCTACAGCTGAACATGTATGTGACAGCGGGGCATAACCAAAGCACGTCTGACACTCCCGGTCGAACCATGATCGGCCAGCAATACAATTACACGGTAATGGCAGGACAGGGAGACGCTTCGGGGCTACTGTTCGGCGGTTACGTCAGCAACTCAAATGACAGCCGGTTTACCGGAACGATTTCAGGAGCAACTCTCACAATCAGTGGGCTGACGGGCGCCGCACTCGCCGTTGGTAAATACGTTTACGGGCAGGGCGTCACGGCTGGAACACAAATCACTGGCGGGTCCGGAACATCATGGACAGTAAATAATAGCCAGATTATCGGCCCAATTTCCATGAATGCCAACATTACCTCAAGCTGGCTAGCAGACCCTGCTTTAACAGCAATCGCGGGAGAATACGACGCCACGTCAAACGGGGTTAATGTAGTATCCGCAGAGTTGACAACACGAGACAACGGCTATTATGCCACCATGAGCGGTTATGGGTCTCATATTTACCGATCCGTTTTGCCGTCTCCTAACCCTAAAGCATTTGTCTGTGTAAATTTCTCGGCCACATCAAATGATAGCCAACCTGTAGACGCATTCTATTACGGACACGGCAAGTCTAAAATTGGCCTAGACTTTTCGACCGCTGATTTTTCTTCAAACAGTGGCGCGGCGTTCACGTTCGCGGCCAATCAATATTCATATTACAATTGCACAAATACAAGCGTTGCAAGCACCCCGGAAGGAACAGTTCTTGGAAATATTTATTCCGGGTATCAATCTGCAAGTTCAGCTTATGTAATAGTCAACGTAAACACCACTCTCCGCGTAAACACCTATGGCGTGGTGATTTCCAACGCTCCGCTGTTCACCAGTGGACAGGTCAACGCAATACGGGTTGTAACCGCATCGGGCGGGGTAACGGTTACGCAGGTTGACCAAGTCGTTGTCATCAATAAAACCGTGGGAGCCGCAACTGCGGTCACTTTGCCGACAGCGCCTAACACCGGAACAATTTTTACAATCAAAGACGGAAAAGGCGATGCTGCGGCAAACAACATTACTATTTCCGGCGCAGTTAATATCGATGGGTCAGCATCCTACGCCATCAATACGAACTACGGAAAAGTGTCTGTTGTTTACAACGGCACAATTTGGAATGTGATTGCATGA

Tertiary structure

PDB ID
74ba88f6f24ee7bc04f4461e3acc4a700e5e92af4661bd21db0134e6ea607933
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5164
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50