Protein
View in Explore- Genbank accession
- CAL1776920.1 [GenBank]
- Protein name
- tail spike protein
- RBP type
-
TFTSPTSPTSP
- Protein sequence
-
MNILRSFTETVVTTPTDIFPISFEYDEKYDAVHVFLNDVAVEDLGYTVSQVNAVTLKIEPAIPEGTVRIERETDIDKMKYIFDAGALFIDQNVDADFRQIVHSQQEVRDGFIKLRGDVLPLVHGLQEALKQAQEASDAAKEAAKAAEEAAALVSGAVTSVKTIADLKALPTWDGRVVVMQGHTELGKKSTIFRYDATNTDPHNNYSVVKPNTGTGNWLALDTAVYESSQLGCGIAITNNDVLINPLLATSGSITIREELPTTNSINVQSYNDIRGLGTRAGFKYNGPSGTADTLEGRLPVVKLFKDNAKAVSQSRLENLTIHANYKPYVTAVDARYLTGQSKLRELIIRGVTDTSVGLVLNKMWYDKISDVFISGYDPSKPDGSRWGTGVVIESKYSSDPASPDYGAQINALTVDVSCHSLKVGYLIRPNNYIYGLNINTMPTVENCDIGFKMESAPASVDYQVRQSCISAYFENNGIDIQWGTPSTTKARNSKHVWLNCSFDDVHSRIELYEGHHTFIGCKGIKTLVCGQYAQAELINTARPTTITDDYGNVTVRQDPMSQITSGSYQNVRTRSQGMLKLKATVNAGATGTFDLGSVLNTTIASEGQTGLVRILSRRSYDTAPVIAQGVILRKPTGTTFTPIGTVPTGMTISIAGTVLSVSETRGDTKFLDIIFNPD
- Physico‐chemical
properties -
protein length: 678 AA molecular weight: 73900,40310 Da isoelectric point: 5,52420 aromaticity: 0,07670 hydropathy: -0,20044
Domains
Domains [InterPro]
DC_0044
STR
1–673
STR
1–673
Coil
Unmapped
122–152
Unmapped
122–152
1
678
Architecture
STR 1-673 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
678
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 239 | 239 | 0,9965 |
| Central domain | 240 | 553 | 315 | 0,9894 |
| C-terminal | 554 | 678 | 124 | 0,9676 |
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-239
1-239
Central
240-553
240-553
C-terminal
554-678
554-678
Taxonomy
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAL1776920.1
[NCBI]
Genbank nucleotide accession
OZ038334.1
[NCBI]
CDS location
range 34833 -> 36869
strand +
strand +
CDS
ATGAATATACTACGCTCATTTACAGAGACAGTGGTGACTACACCTACAGATATTTTCCCTATCAGTTTTGAGTACGATGAGAAATATGATGCTGTACATGTCTTTCTTAATGACGTAGCAGTTGAAGACTTGGGGTACACTGTATCTCAAGTTAATGCTGTTACTCTAAAAATTGAACCGGCTATTCCAGAAGGTACGGTTCGTATTGAACGCGAAACAGACATTGATAAGATGAAGTACATCTTCGATGCGGGTGCGTTATTCATTGACCAGAATGTTGATGCAGATTTTCGACAGATCGTACACTCTCAGCAAGAGGTGCGAGATGGTTTTATTAAACTACGTGGTGATGTATTACCACTAGTACACGGTTTACAAGAAGCTTTGAAACAAGCACAAGAGGCTAGCGACGCTGCGAAAGAAGCTGCTAAAGCTGCGGAAGAAGCTGCTGCGTTAGTTAGTGGTGCAGTTACATCTGTCAAAACTATTGCAGATTTAAAAGCACTACCTACATGGGATGGACGTGTAGTCGTTATGCAAGGTCATACTGAGTTGGGTAAGAAATCCACTATATTCCGCTATGACGCTACTAACACAGATCCCCATAACAACTATTCTGTAGTTAAACCTAATACTGGTACAGGTAATTGGTTGGCTTTAGATACTGCTGTGTATGAAAGTTCTCAGTTAGGATGTGGTATTGCTATTACTAATAACGATGTATTAATTAATCCATTATTGGCTACATCTGGGTCTATTACAATCCGTGAGGAGTTGCCTACTACGAACTCAATCAATGTGCAGAGTTACAACGATATTCGTGGTTTAGGTACACGAGCAGGGTTTAAATATAATGGACCTAGTGGTACTGCCGATACTTTAGAAGGTCGCTTACCAGTTGTTAAACTATTCAAGGATAATGCTAAGGCAGTCAGTCAATCTAGGTTAGAGAACTTAACCATCCATGCAAACTACAAACCTTACGTAACTGCTGTGGATGCTCGATACTTAACAGGTCAGTCTAAGTTACGTGAATTAATTATCCGAGGTGTTACAGATACGTCTGTAGGTTTGGTACTCAATAAGATGTGGTACGATAAAATCAGCGATGTATTTATCAGTGGTTATGATCCTAGTAAACCTGATGGTTCTCGTTGGGGTACTGGTGTGGTTATCGAGTCTAAGTACTCGTCTGATCCTGCATCACCTGACTACGGGGCACAGATCAATGCTTTGACAGTGGATGTATCTTGTCATAGTTTAAAGGTAGGTTACTTAATTCGACCAAATAACTACATCTACGGTTTAAATATTAATACAATGCCTACTGTAGAGAACTGCGACATTGGCTTCAAGATGGAATCTGCACCTGCATCTGTAGATTATCAAGTACGGCAAAGCTGTATTTCTGCGTACTTTGAAAACAACGGTATTGATATTCAGTGGGGTACACCTAGTACCACTAAAGCACGTAACTCTAAACATGTATGGTTGAATTGTTCGTTCGATGATGTTCACTCACGTATTGAGTTGTATGAAGGTCATCATACATTCATTGGCTGTAAAGGTATTAAGACTCTTGTGTGTGGACAGTACGCTCAAGCGGAACTTATTAACACTGCACGACCTACCACTATCACTGATGATTATGGTAACGTAACTGTACGTCAAGACCCTATGTCTCAGATTACATCTGGCTCGTATCAAAATGTACGTACACGTTCTCAAGGTATGCTGAAACTCAAGGCTACCGTCAATGCTGGTGCTACTGGTACGTTTGACTTAGGTTCTGTGTTAAATACTACTATTGCTTCTGAGGGACAGACAGGTTTAGTACGCATCCTATCCAGACGTTCTTATGATACTGCGCCTGTTATTGCACAAGGTGTTATCCTACGTAAGCCTACAGGTACTACATTCACACCTATCGGGACTGTGCCTACGGGTATGACCATTAGTATAGCAGGTACGGTGTTAAGTGTATCTGAAACTAGAGGCGACACAAAGTTTTTAGATATTATTTTTAATCCAGATTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
15f6d9ea8d970600aa94899ba2993480e0369553ff85670e7d6243087f15f101
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50