Protein

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Genbank accession
QTQ06916.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MEKRPLFRGYWAQDASPDDIGDADVYIPTNPVYPEQVPEQYTAGWFVSPGDEKVKQPHQWNNAWLQSIDWQLWSWYIGRSTWHPELTYAHGAVVYVDGKRYIAASENKGVEPTANPVIWEAAAFHTKSEMDSGYNSTNKKYTDHETRRDNPHGVTYEDVGGYSKQQIDDLVKAEQTDVDNHVKNTSDPHEVTPEQLNTLPTSGGAFSEAVSLLKMVFGAGGEIRRLSDGFELYIPDNGGARFGIHTKTKEAQLNGEPMLTDVNYGRIRQRNAWKFVAPSADVHIPLSSDLNGYNSSFGGVEYESTAEIHYTDKSGNAQVAAPGYPGFGKFGLELRAGTNQSLVAPFPANGVQGTVFGVLDGLPAVGVGPLNQSNLLEYFPTGTALRDLRVWLHVLTPYQIAALGVNA
Physico‐chemical
properties
protein length:407 AA
molecular weight: 44852,07290 Da
isoelectric point:5,10343
aromaticity:0,11057
hydropathy:-0,50909

Domains

Domains [InterPro]
DC_0782
STR
19–396
DC_0782
G3DSA:2.10.10.90
STR
36–122
G3DSA:2.10.10.90
QTQ06916.1
1 407
Architecture
STR
STR 19-396 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage PVN05
[NCBI] 		2822866 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QTQ06916.1 [NCBI]
Genbank nucleotide accession
MW380985.1 [NCBI]
CDS location
range 2822 -> 4045
strand +
CDS
ATGGAAAAGAGGCCATTATTCCGAGGGTACTGGGCGCAAGATGCGTCACCAGATGATATCGGTGATGCGGATGTGTATATCCCGACGAACCCAGTTTACCCTGAACAGGTACCGGAACAGTACACTGCTGGCTGGTTTGTATCCCCAGGCGACGAGAAGGTCAAGCAACCGCATCAATGGAACAACGCGTGGTTGCAGTCTATAGACTGGCAACTGTGGAGCTGGTACATCGGGCGGTCAACTTGGCACCCTGAACTCACTTATGCTCATGGCGCGGTAGTCTACGTAGATGGCAAGCGTTACATCGCCGCAAGTGAGAATAAGGGCGTTGAGCCAACTGCGAATCCGGTGATATGGGAAGCCGCCGCGTTTCACACCAAGTCTGAGATGGACAGTGGGTATAACAGTACCAACAAGAAGTACACTGACCATGAGACGCGTAGGGACAACCCACACGGAGTCACCTACGAGGACGTAGGCGGCTACTCTAAGCAGCAGATTGATGACTTAGTAAAAGCTGAGCAGACAGACGTCGACAACCACGTGAAGAACACGTCAGACCCGCACGAGGTGACGCCAGAGCAGCTTAACACGCTGCCAACGTCCGGCGGAGCCTTCTCTGAGGCAGTGTCGCTATTGAAGATGGTGTTTGGCGCGGGTGGAGAAATCCGAAGGTTGTCAGACGGGTTTGAGCTCTATATCCCCGATAATGGTGGAGCGAGATTTGGCATTCATACGAAGACCAAAGAAGCCCAGCTGAACGGTGAGCCGATGTTGACCGATGTGAATTACGGGAGAATCCGGCAAAGAAATGCGTGGAAATTCGTAGCCCCATCAGCTGACGTACACATCCCGTTATCATCCGACCTCAACGGATACAATTCATCATTCGGTGGAGTTGAGTACGAGTCCACGGCAGAGATTCACTACACCGACAAATCAGGCAACGCACAAGTCGCGGCACCTGGGTACCCTGGATTTGGGAAGTTCGGATTAGAACTGCGGGCTGGTACAAACCAATCACTCGTGGCCCCGTTCCCCGCCAACGGTGTACAAGGCACTGTGTTCGGGGTACTGGACGGGTTGCCAGCGGTCGGAGTGGGGCCATTAAACCAAAGCAACCTTTTGGAGTACTTCCCTACGGGGACAGCACTAAGAGACCTGCGGGTGTGGTTGCATGTGCTTACACCGTATCAAATAGCAGCATTGGGAGTTAATGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4d34efbcf3e5b23db71bcbe2f79760cecb44b44a262ce279f101cb815624c5e8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5943
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of Aeromonas hydrophila bacteriophages isolated in striped catfish farms in the Mekong Delta, Vietnam Hoang,H.A., Quang,V.T., Phi,N.L., Thi,X.T. and Nguyen,N.H. 2021-06-30 — GenBank