Protein

View in Explore
Genbank accession
AUR82310.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MATPGGLVDKQELIDAQLDTAHLGRVVNSKDASGAPINTSTNRTGGVNKTLDALEAEYQGEIDALETRSDAAIADAEDKFDTQREQFDSTFQAQFQYGRIGNISDYVGQSLPEADKLNSYQYPDDSDEWYGPIQSQTFPITIPADPTVSGSGWALVNALTPSSLGGLTNYQASSVADMINGNALGGTVSLSIGQRWIVDDYYGGSTPSESGVLFFKVVAAGTGTDDGGKYIDVPGGVFQLEQNLKKRVDIKAYGAVPDCVSSIGTDNTLRIQRAFDYANANKYANYIPAGRYLAEGLVTNTDAVLFGDGRYLSLLCSNETGDTILSQGSTSDTWGVGGTLQMNGVGFIGTDDWASLAPVVDSALVILSTTARAILNDVSATKGRSSNIIFNSSGYTHIEDCDFSACNVDDLLLKTITTEVNAVTSTHIENTRMSTGLVSGLHMDGVYNVTVVNNQLEDNEIPFRMSGDNYNIVINGNYVEATRGDYDFDASAAATTGLSIYGNYLFGTPNIQTFNFNTNLNGAHPRTFIYDNHGATLLESQTFNELANLEWLQNSRNAGSVNFDICKAHSDPQQFSQANVTTALGWGVSTRASSTAGAYWIGLTNSEVMEGGVAGKYGYMTQESTGKGAVNREATESYQWHIGEESSGLNLNALKCTITSGDVLWTGGLGYTMTGTPNATQAALFVRQPNVGGRSINASGTVNASGADYAEYMTKCHNCGEIAKGDICGIDKDGKLTTVFSDAISFVVKSTDPSYVGGDTWHLPAGEPPILESKMPKLNEHATKEEIEAYNNAVIEYSNDVALFNIKMDKYKSEVEKLRETVDRIAFCGQVPVNAVASVGDYIIPESINNKITGKAVVSPSFDEYMLAVGKVIKVDNGVPVIIVKTV
Physico‐chemical
properties
protein length:887 AA
molecular weight: 94883,88060 Da
isoelectric point:4,50463
aromaticity:0,08568
hydropathy:-0,23258

Domains

Domains [InterPro]
DC_1322
ATT
12–220
DC_1322 IPR011050 Coil
IPR011050
STR
246–520
IPR011050
IPR012334
STR
247–602
IPR012334
AUR82310.1
1 887
Architecture
ATT
STR
ATT 12-220 | STR 245-602 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR82310.1
1 887
Domain Start End Length (AA) Confidence
N-terminal 1 266 266 0,9934
Central domain 267 562 297 0,9837
C-terminal 563 887 324 0,7481
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-266
Central
267-562
C-terminal
563-887

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.023.O._10N.222.51.B4
[NCBI] 		1881419 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR82310.1 [NCBI]
Genbank nucleotide accession
MG592407.1 [NCBI]
CDS location
range 1 -> 2664
strand +
CDS
ATGGCAACTCCAGGCGGTCTCGTCGACAAGCAAGAATTAATCGACGCACAACTCGACACGGCACACTTAGGTCGTGTCGTCAATTCTAAGGACGCTTCAGGCGCTCCTATCAACACATCTACGAACCGCACAGGCGGAGTGAATAAAACACTCGACGCGCTTGAAGCAGAGTACCAGGGTGAAATCGACGCGCTTGAAACCCGTAGCGACGCGGCTATCGCTGACGCCGAGGATAAGTTCGACACCCAACGCGAACAGTTTGACTCGACGTTTCAAGCTCAGTTCCAGTACGGGCGTATCGGTAACATTTCGGATTACGTCGGTCAGTCATTACCTGAAGCTGACAAGCTTAATTCGTATCAATACCCCGACGACTCCGACGAGTGGTATGGTCCTATTCAATCGCAAACATTCCCGATTACAATCCCTGCGGACCCTACAGTTTCAGGTAGCGGATGGGCGCTAGTTAACGCTTTAACCCCATCATCGCTTGGCGGACTAACAAACTACCAAGCCTCCAGCGTTGCTGACATGATAAATGGTAATGCGTTAGGCGGAACGGTAAGCCTTTCTATTGGTCAGAGGTGGATTGTTGATGACTATTACGGCGGCTCAACACCTAGTGAATCAGGCGTTCTATTTTTTAAGGTTGTAGCAGCGGGGACTGGTACGGATGATGGTGGTAAGTACATTGATGTGCCTGGTGGTGTGTTTCAGTTAGAGCAAAATCTCAAGAAGAGGGTAGACATCAAGGCTTATGGCGCTGTTCCTGATTGCGTGTCAAGCATCGGTACGGATAATACCTTGCGTATTCAGCGAGCATTTGATTATGCAAATGCTAATAAATACGCAAACTATATCCCTGCTGGCAGATATTTAGCTGAAGGTCTAGTGACAAATACCGATGCGGTTCTTTTTGGTGATGGTCGATACCTTAGCTTGTTGTGCTCAAACGAAACAGGGGATACAATTTTATCTCAAGGTAGCACTAGCGATACATGGGGGGTTGGCGGTACTCTGCAAATGAATGGTGTTGGTTTCATTGGTACAGACGACTGGGCTTCTCTTGCTCCTGTTGTAGATTCAGCGTTAGTTATACTAAGCACCACGGCAAGAGCTATTTTAAATGACGTATCAGCAACAAAGGGAAGATCGTCAAATATTATTTTTAACTCTTCAGGATACACTCACATTGAAGACTGTGACTTCTCAGCTTGTAATGTGGATGACTTGCTTCTTAAAACGATAACGACAGAGGTAAACGCTGTTACCTCTACTCACATAGAAAATACCAGAATGTCAACAGGCCTAGTTAGCGGCTTGCACATGGATGGGGTTTACAATGTGACAGTTGTAAACAACCAGTTAGAAGATAATGAAATTCCATTCCGTATGTCTGGTGATAATTACAACATAGTTATCAATGGTAACTATGTTGAGGCAACTCGTGGTGATTATGACTTTGACGCTAGTGCAGCAGCAACAACGGGACTTAGTATTTACGGAAACTACCTATTTGGTACACCGAATATTCAAACGTTTAACTTTAATACGAACTTAAACGGGGCACATCCAAGAACGTTTATTTACGATAACCACGGCGCGACTCTTCTTGAGTCACAAACGTTCAATGAGTTAGCAAATTTAGAGTGGCTTCAGAATAGTCGTAACGCCGGATCTGTTAACTTCGATATATGTAAGGCTCACAGCGATCCTCAACAATTCTCACAAGCTAATGTAACTACAGCGCTAGGGTGGGGTGTTTCAACAAGAGCCTCATCAACTGCTGGCGCGTACTGGATTGGGCTTACAAACTCTGAGGTTATGGAGGGTGGCGTAGCTGGTAAGTATGGTTACATGACACAGGAATCTACGGGTAAAGGCGCGGTAAATCGAGAGGCAACTGAATCTTATCAGTGGCATATAGGTGAGGAATCTAGTGGGCTAAACTTAAATGCGCTTAAATGTACGATAACTTCAGGAGATGTTTTATGGACTGGTGGCCTTGGTTATACAATGACGGGTACGCCAAACGCAACACAGGCCGCGCTGTTTGTAAGGCAACCAAACGTAGGCGGTAGAAGTATAAACGCCTCGGGCACTGTAAACGCAAGCGGCGCTGATTACGCAGAGTATATGACCAAATGCCATAATTGCGGTGAGATAGCGAAAGGTGATATCTGTGGTATTGACAAGGATGGTAAATTAACAACCGTATTTAGTGATGCTATTTCTTTTGTAGTTAAGTCAACCGATCCTAGTTATGTTGGCGGGGATACATGGCACCTTCCAGCTGGTGAACCCCCTATTCTTGAATCAAAGATGCCAAAACTTAACGAGCACGCTACTAAAGAAGAGATTGAGGCTTACAATAATGCAGTTATTGAGTACAGCAATGATGTTGCATTATTTAACATTAAAATGGACAAGTACAAATCTGAAGTTGAGAAACTGCGTGAAACAGTTGATAGAATCGCGTTTTGTGGTCAGGTTCCAGTAAATGCAGTAGCTTCAGTTGGTGATTACATTATACCTGAAAGCATCAATAATAAGATAACCGGAAAAGCGGTGGTGTCTCCTAGCTTTGATGAATACATGTTAGCCGTAGGGAAGGTAATAAAGGTTGATAATGGGGTTCCAGTAATAATAGTTAAGACAGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2624608165fd6de2555e0706b733434ec53a280bae7fff6784bebff0e7e6f2af
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7367
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank