Protein

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UniProt accession
A0A879R2E3 [UniProt]
Protein name
Virulence-associated VriC protein
RBP type
TF
Evidence RBPdetect2
Probability 0,62
Protein sequence
MAQKTNLNVSPYFDDFDAEKNFYKVLFNPGRPVQARELNNIQSILQNQVESFGSHIFKEGSVVIPGNLTYDPQFNAVKLNPTNFGVNISLYINQFLGKKITGQISGVTGVIQKIEVPDSINNLEYITLYVKYNDSGENFSITPFQNGESLVSSENVVYGNTTIVAGNPFASLISTDATAVGSAVSIDTGIYFVRGTFVNVSKQTIILDYYTNTPSYRVGLKVSEEIITAKEDDSLYDNAKGFTNYAAPGADRFKIGLSLTKKTIDSVDSDVDFIELLRLDAGQVKKLNTNTEYSIIKDYLAQRTYDESGNYSVTPFKVSLHDSLNNRLGNNGLFFKDQKTESGSTPSDDLMCIKLSPGKAYVRGYDIEKISTTILDVPKPRDTQNVDNVNIPFEMGSLLRINNITGSPKQNESVELHSVRRSASGNPSSTTKVGDARVYNFRLTDAAYSSASTNWDLYLYDIQTYTTLILNQALSQSQLPASSFIKGKSSGASGYVVSAGDGTTTVNVRQTSGTFIKGEQIIINGLELYPRSIANITVYNSDDIKQVYQSTSVSGFTTAFIGDSVLSKQLPIGFNASDTVNISAGGVVTSPGKFFNVIKPGSIIRYQTSTGSVENFNRVTSISLTGDSMTVVGVATVTGVCNGAIGVSTNISFSIGAPTIRNLEKGFLYAEVPNSNLSSIDLNDSILTFSAQSTSAKSSSSPIVLSVSDFSLPTGLTTALFQGFDEERYSVHYTDGTTQSLTADQFSLSNNQVTLSNLTSGKTTSSINATFIKNGVQSKEKQYNRSQTVNVIYSKYLESGTGISTSINDGLQFNPYYGLRVQDEEISLNYPDVAKVLAVYESLNTSNPSLDTLSFSSVLNIGGNAIIGENIIGSESGCVARVVTRSTNSVGIVFLNSNRFLTNENVTFEESNIVGQIDSITLGSYNDITNRFKLDKGQKEQYYDYSRIVRNEGETEPSKRILVVFDYFSVPTTDNGDVFTVLSYNKEQFADDVPLIGSRSVRASDTLDFRPRVSVFSGSSSSPFDFSNRNFSSSIKLNLTPNETTIIGYDYYVGRVDKVYLDKNGEFVYVQGTSSSNPKSPVKIDDVMEIATINLPPYLYTPKSATLSLVDNRRYTMRDIGLIENRVKNLERVTSLTLLELSTQTLQIQDSQGFNRFKTGFFVDDFKDYERVNLNFSLLEIDPELQEMRPIISRNSLKNYLAPALNIINEEVDLSTNYALIDSNVQKTGSTVTLKYASEKWIDQPLATQVENVNPFHVISYKGSIKLSPDRDNWVRTVQLPNKTISVTDFVLVERDNTVLGDRTVRVDNGANASRTELSTEFSQTVTETSSSSVRSTSSTRLVEARAEEYMRSRNTEFSITSLKPYTRYYQFLDGNGSVDFIPKLIEIANSESLENYGSSSAFTIGETVVGYDNQNNKIITFRVAMPSHKIGPFNSPTNKFTVNPYSRTESIPDAYSASSKVLNLDTYSISEEAQGLYSGYLVRGAKLVGQTSGAVAYVKDLRLISDNYGDLIGSFFIRDPNTNPVPDVRINTGTKTYKITSSPTNEVAVAGSTTISSAETNYISDGTLELYETTITNTTTVTNTRLTTTNITRVTTNFEQTQFPQQNRGGGKDPLAQTFTVDQDGGFLTEVDLYFYKKDSGNNPLTVEVRTVELGTPTTIVVGNPVTLRPDQIQTSDDASAVTKAVFDYPIYLAPGLEYAIVLLSPESVEYEVFIAEMGKKTIQSRNLPDSEAVVYTQQFAMGSLFKSQNGSVWTADQYQDMKFTLYRANFVTNTPATAFFYNPTLNESNGYIPNLQNNPLTVFPRKVSVGITTATNSTMVGILTTGRKISESTKTYNYGYIVGTGCSVSSVGVTTAGSNYVSDTSVSTYNIIGSGSGLTLNITASAGAITAASIVNPGNGYAVGDVVGIVTSSVSSNSGRDARITITGNNGGIDTLYLSNVQGESFTSDGTANLVYFDSSNNSVSLGNTYITSSTAVGSIYSGNFVKVNHFNHGMYAANNKVAISGVIPNTAPTTLSQSITASSTSISVASTSNFTTFEGKTVNGTNPGYAIIENEIIKYESIGSGTLETITRGQSSTLALPHSVNIPVYKYEFNGVSLQRINTTHNISDTGLDIDNYYIEIDRSSNGVNRSVDNTPSGYPQLSFSSEITSGGSKVFASENIQYDAIIPFYDAATPTSATSLSAKIRTVSGTSISGNEVSFQDLGYEDIQINSLNTLSSSRIVASKVNEDTFLTNLPRNKSFTTALTLSSSNKYVSPQIFLDTSFTDFHSNRINSPISNYQQDGRVNSILDDPHAAIYISNTVRLSQPATSLKVILSAYRHFSADFRVLYSLIRADSSEVEQSFELFPGYNNLTIDNNNDGYPDVIDPANNSGLPDIFVPASNENQFLEYEFSANNLGQFSGYTIKIVMSSTNQAYPPRFKDLRSIAIR
Physico‐chemical
properties
protein length:2431 AA
molecular weight: 265286,07910 Da
isoelectric point:4,96639
aromaticity:0,09543
hydropathy:-0,26162

Domains

Domains [InterPro]
IPR032096
STR
11–81
IPR032096 IPR032096 IPR032096
DC_0414
STR
80–1289
DC_0414
DC_0082
RBD
1246–2431
DC_0082
A0A879R2E3
1 2431
Architecture
STR
RBD
STR 11-1289 | RBD 1290-2431
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SRM01
[NCBI] 		2781608 Uroviricota > Caudoviricetes > Pantevenvirales > Serangoonvirus > Serangoonvirus essarone
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
61621b5bf196ef1b07277205bc468c1771d22f40ccc0d181106abec9ae385467
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7848
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50