Phage RBP Database

UniProt accession

A0A6J5M494 [UniProt]

Protein name

Collagen triple helix repeat

RBP type

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 1,00

Seq2Symm

C3 confidence 0,705

C3	0,705
C1	0,349
I	0,025

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MSQVTLEITESSTTLAVTATNTDVNVTETFTTLSLGNAGPQGIQGIQGNLGPANTLTVGTVEGSEPGAEPEIEITGTAPNQTVNFVLPTGATGPTGPTGSTGPTGPQGATGATGPQGIQGIKGDTGDTGPTGPQGLTGPTGATGPKGDKGDTGATGSVGQTGPQGPQGDTGPAGPTGATGATGAQGPKGDKGDQGDQGIQGIQGATGPKGDTGLTGATGPTGATGLNWQGTWSALTNYVNDDAVYHNNSSWFASGDPTVGEEPTLSATHWMPLALQGATGATGATGPQGAKGDTGATGATGPQGAQGIQGLTGDTGPTGPQGLKGDKGDTGDTGPQGATGSTGATGATGPQGPTGATGPTGPTGVIAATSPVAYNAQTQTVSLSATTITVNGTAVALGGTITVNARLA

Physico‐chemical properties

protein length:	408 AA
molecular weight:	38489,91230 Da
isoelectric point:	4,07367
aromaticity:	0,02451
hydropathy:	-0,40588

Domain architecture

A0A6J5M494

1 408 aa

STR 90–141 · STR 168–225 · STR 311–364 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR050149
Unmapped

IPR050149

IPR008160
STR

IPR008160 IPR008160 IPR008160

A0A6J5M494

1408 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0620
STR

DC_0620 DC_1819

DC_0656
STR

DC_0656

A0A6J5M494

1408 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR050149	Unmapped	-	37	364	InterPro	Collagen superfamily	-	-	-	-
IPR008160	STR	DC_0536	90	141	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
IPR008160	STR	DC_0536	168	225	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
IPR008160	STR	DC_0536	311	364	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits

Proteins with similar domain architecture

Phage

uncultured Caudovirales phage [NCBI] · taxon 2100421

Uroviricota Caudoviricetes Peduoviridae Maltschvirus Maltschvirus maltsch

Host No host information

No CDS data available.

	Description	Category	Evidence (source)
GO:0031012	extracellular matrix	Cellular Component	IEA:TreeGrafter (UniProt)
GO:0005615	extracellular space	Cellular Component	IEA:TreeGrafter (UniProt)
GO:0030020	extracellular matrix structural constituent conferring tensile strength	Molecular Function	IEA:TreeGrafter (UniProt)
GO:0030198	extracellular matrix organization	Biological Process	IEA:TreeGrafter (UniProt)

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Gene Ontology

Tertiary structure

Predicted Aligned Error (PAE)