Protein

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Genbank accession
AMQ23541.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
VVDCTVKAPFYVYDASYNALFPLKQEDGISMVSSKRQFRSVCDYKTDRVGIFDGRISISGQNSFDHVENYGVVFDCTSQVQTAPYGIHFGEVTTMGGTPFQSISYYDGIDTACIGSIFLAEDGRYYANVEWSQYSYSEVSRYETRSSCYYRRAQKYANVNEAIPVSGWNDPSWFEKILQYPTSRRRFVSSRLKGGRHYNRFCYMLTIRTLPRLRSG
Physico‐chemical
properties
protein length:216 AA
molecular weight: 24836,49420 Da
isoelectric point:8,66657
aromaticity:0,15741
hydropathy:-0,44907

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AMQ23541.1
1 216
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0183
Central domain 11 200 191 0,6824
C-terminal 201 216 15 0,9603
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-200
C-terminal
201-216

Taxonomy

  Name Taxonomy ID Lineage
Phage Leviviridae sp
[NCBI] 		2027243 Lenarviricota > Leviviricetes > Norzivirales >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMQ23541.1 [NCBI]
Genbank nucleotide accession
KT462704 [NCBI]
CDS location
range 1 -> 652
strand +
CDS
CGTCGTAGACTGCACTGTCAAAGCACCGTTTTATGTATACGACGCCTCGTACAATGCACTTTTCCCGCTTAAGCAGGAAGATGGCATATCGATGGTGTCGTCTAAGCGGCAGTTTCGTTCTGTCTGCGATTATAAGACGGATCGCGTTGGTATCTTCGACGGAAGAATCTCAATCTCTGGCCAGAATTCGTTCGACCATGTTGAGAATTATGGAGTGGTGTTTGACTGTACAAGTCAAGTACAGACAGCGCCTTATGGTATTCACTTCGGTGAAGTAACAACCATGGGTGGCACACCTTTCCAATCAATCTCCTACTATGACGGTATCGACACAGCTTGTATCGGCAGCATCTTCCTTGCGGAAGACGGTCGGTATTATGCGAATGTCGAGTGGAGTCAGTACTCGTACTCAGAAGTATCTAGGTACGAGACACGCTCTAGCTGTTACTATAGGAGAGCGCAGAAATATGCGAATGTTAATGAAGCTATTCCCGTATCAGGATGGAATGATCCATCTTGGTTTGAGAAGATACTTCAGTACCCCACATCAAGGAGAAGATTTGTGAGTAGTCGTCTTAAAGGCGGACGCCATTATAACAGATTCTGTTATATGCTCACTATCCGTACCTTACCCAGATTACGATCTGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fddaf25ad031bf4155c0044162dfee65ca8d302972511031b922ffb50ca5eefc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2753
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Hyperexpansion of RNA Bacteriophage Diversity Krishnamurthy,S.R., Janowski,A.B., Zhao,G., Barouch,D. and Wang,D. 2016 27010970 GenBank