Phage RBP Database

UniProt accession

A0A2P0PAQ8 [UniProt]

Protein name

Structural protein

RBP type

TSP

Evidence RBPdetect

Probability 0,85

TSP

Evidence RBPdetect2

Probability 0,61

Seq2Symm

C3 confidence 0,991

C3	0,991
C1	0,127
D3	0,005

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MCDKDTCNDASCCGECEPWNCLEQQVNDILATKEGQLQGYVDESKNSAAESKASAEASAQSAAESKEFRDEAETAASTAVAAEGVVLGVANTLQDTADKLGTAIAGIAVVTWYYTAVSENQTVIPVPDDKNQIAIQAIYIEGARKEPGPSRDFTYDPVTKQITLVEGIPLGQEIAIILGVYPENSDDITHILASSTGAGLIGTTNGNTVQDELNANSGSFQDGAKLLNKNNRIIDRSTNPAQLYIWDGLFPKAVPVGSTPETSGGVGVGAWISVGDAALRSELAMNDGAYLSGYGSMTVGSFLDEMTNATLITAVVTDLNANNRDAIYAHDGYVYVPRGVTVRCNFLPADDVRKFVGHGRVTTTDPWGYTHTFDVELANTGSKITARQIVAQGIKQLQGPGWQQTTIGTIGDSITDGSAGDNFTFPNPIDADGNLSSTNYDHGSNPAGGMNSWFHHFVNTVNLLAGYSEYHNRNICIGYNAARSGMGINSGWAYRNFDFGFFRNAAYGNKAPEVLLVSMGTNDVGQVFTKSDCEAYIDKLDALIAKANGYGCKVVLVSMTHFSAMAPVFYDAVMTCVQNNHPNVEFLNLADDLKLLANSSIGFYNELFREFDAIHPKTLAHQFLGGALARRMLPDRVFSIQNGDNVRSAQSGSVQAFMPLLDDITPFGIDVSANWLLPETIWPIYQTSSGTDGSDITIRHFVWVERVTQLYIVEPHVNYYESGAIPGASAKIMYPCLAGEARSRELELASNLKASFDGFLVTECDLLWPGLNVIDVKYSSVINAYAPILQFREPSWRGEFGPMRIKIPSGSANLYSNNTQTHFLQYMSFNASSPLDPLPDAGRGVRVSDWLITFAIKRASIGVAVAAWFHQFLGTSIAVFYKSATSIEVCRMTSGILKEVIADVTGNFSSDWHVQFAQASTGSIVNVIDSTGVETITPITGVSGGSIGIINLNGEAAELVVAGVSVELPRNGHIVI

Physico‐chemical properties

protein length:	976 AA
molecular weight:	104966,34730 Da
isoelectric point:	4,74750
aromaticity:	0,09119
hydropathy:	-0,05768

Domain architecture

A0A2P0PAQ8

1 976 aa

ATT 214–285 · STR 312–375 · STR 382–633 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:2.10.10.80
ATT

G3DSA:2.10.10.80 IPR049297 IPR036514

IPR040775
RBD

IPR040775 SSF52266

cd00229
ENZ

cd00229

A0A2P0PAQ8

1976 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0519
STR

DC_0519 DC_2010

A0A2P0PAQ8

1976 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:2.10.10.80	ATT	G3DSA:2.10.10.80	214	285	Merged direct domain	G3DSA:2.10.10.80	N-terminal	Low	Positional only	383 proteins / 383 hits
IPR040775	RBD	DC_0821	215	276	InterPro cluster	Tail spike TSP1/Gp66, N-terminal domain	Central	High	Text match	1281 proteins / 1285 hits
IPR049297	STR	DC_0433	312	375	InterPro cluster	Tail fiber protein, third domain	Central	Low	Positional only	17 proteins / 17 hits
IPR036514	STR	IPR036514	382	632	Merged direct domain	SGNH hydrolase superfamily	Central	Low	Positional only	180 proteins / 180 hits
SSF52266	STR	SSF52266	402	633	Merged direct domain	SSF52266	Central	Low	Positional only	227 proteins / 227 hits
cd00229	ENZ	DC_0001	490	630	InterPro cluster	cd00229	C-terminal	High	Text match	480 proteins / 783 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

A0A2P0PAQ8

1 976 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	285	285	0,9933
Central domain	286	484	200	0,9149
C-terminal	485	976	491	0,6273

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Pectobacterium phage vB_PatP_CB1 [NCBI] · taxon 1958917

Uroviricota Caudoviricetes Schitoviridae Cbunavirus Cbunavirus CB1

Host

Pectobacterium atrosepticum [NCBI] · taxon 29471

Pseudomonadota Gammaproteobacteria Enterobacterales Pectobacteriaceae Pectobacterium Pectobacterium atrosepticum

No CDS data available.

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)