Phage RBP Database

UniProt accession

U5PXV9 [UniProt]

Protein name

Tailspike

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,99

TSP

Evidence UniProt/TrEMBL

Probability 1,00

Protein sequence

MSNSNYMYFVDFEKFGIRSDGTEARATTDGWIAALKEAVELGYHTVYVPEGLYLIDAVSTVGSLPEYGGGLMFPSNIEVIFHERALFMVAPNSSTGYACFNLENVENVTLRGGTIIGDRYEHDYVTDGVPDNRKTHEWGHGIHIRGCRNITVENATVMNCTGDNIWVPAKGMMNWEGSTYIPSEGITIRKCILIRGRRNNLATNGCLGMNVDDCDFIEAGGDTIGPAFGIDLEGFAENSIKYDHPYEINITNCRFKRNGKGALNINVTGKVHATNNFSDDVFSYGFSTDSTISNNTITNETGIDKPYGIDSIRKSSSETGNRTIITGNQIRGFATGICARGVGVIVSQNYLEDISSVGINPYLSEDVMVANNTINSDCLHVWVRNSVDVQVGNNKGKDAENYYGIKVEDSSDVVVNDNKHVAKGGIQVARSTNVRIKDNDLTLIGNGNGISWDKTSQVKLIKSNWISGAVAAAISGYADAYSTIISYNILEDCKYLIAIYLNGGAHHMLKGNDIMFRRGANGGYGVQLVNTTQARLISNDVRTMDGCTLHASYDSTGSTYTKYAYNTYIGKINLGQADTENYNTKLD

Physico‐chemical properties

protein length:	587 AA
molecular weight:	64156,80430 Da
isoelectric point:	5,31902
aromaticity:	0,09029
hydropathy:	-0,29387

Domain architecture

U5PXV9

1 587 aa

STR 13–584 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR012334
STR

IPR012334 IPR011050

IPR011050
STR

IPR011050 IPR012334

IPR006626
Unmapped

IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR007742

IPR039448
ENZ

IPR039448 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626

U5PXV9

1587 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0453
RBD

DC_0453

U5PXV9

1587 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR012334	STR	IPR012334	13	376	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR011050	STR	IPR011050	33	394	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR006626	Unmapped	-	105	146	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR039448	ENZ	DC_0799	135	299	InterPro cluster	Right handed beta helix domain	C-terminal	High	Text match	178 proteins / 183 hits
IPR006626	Unmapped	-	147	169	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	183	205	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	206	234	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	245	267	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	287	313	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	320	341	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR007742	CBM	DC_0096	348	512	InterPro cluster	Periplasmic copper-binding protein NosD-like, beta helix domain	C-terminal	High	Text match	28 proteins / 31 hits
IPR006626	Unmapped	-	364	409	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR011050	STR	IPR011050	382	539	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR012334	STR	IPR012334	396	584	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR006626	Unmapped	-	410	430	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	431	454	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	480	503	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	504	530	InterPro	Parallel beta-helix repeat	-	-	-	-

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

U5PXV9

1 587 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	23	23	0,9467
Central domain	24	576	554	0,9974
C-terminal	577	587	10	0,2523

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Bacillus phage Grass [NCBI] · taxon 1406785

Uroviricota Caudoviricetes Herelleviridae Nitunavirus Nitunavirus grass

Host

Bacillus subtilis [NCBI] · taxon 1423

cellular organisms Bacteria Bacillati Bacillota Bacilli Bacillales

Genbank protein accession

AGY47298.1 [NCBI]

Genbank nucleotide accession

KF669652 [NCBI]

CDS location

range 12414 -> 14177
strand -

CDS

TTGTCGAACTCGAACTATATGTACTTTGTTGACTTTGAGAAATTCGGAATCAGGTCTGATGGGACAGAGGCTAGAGCAACCACTGACGGGTGGATTGCTGCACTTAAAGAGGCTGTAGAGCTCGGATATCACACAGTATACGTTCCAGAGGGTCTTTACCTTATTGACGCTGTAAGCACTGTAGGTAGCCTTCCAGAGTACGGTGGTGGCTTAATGTTCCCATCAAACATCGAGGTAATCTTTCATGAGAGAGCGCTGTTTATGGTAGCGCCAAATAGTTCAACAGGGTACGCCTGTTTCAATCTTGAAAATGTGGAAAATGTGACTCTTCGAGGAGGAACGATCATCGGGGACCGCTACGAGCATGACTACGTTACAGATGGAGTACCAGATAATCGTAAAACTCATGAGTGGGGTCACGGAATCCATATCAGAGGCTGCCGTAACATCACAGTAGAGAACGCAACTGTCATGAACTGCACAGGTGACAACATCTGGGTGCCTGCCAAAGGTATGATGAACTGGGAGGGCAGCACCTACATACCATCTGAGGGGATCACTATACGTAAATGCATACTGATTCGAGGAAGACGTAATAACCTAGCCACGAACGGCTGCCTTGGCATGAATGTTGATGACTGTGATTTCATCGAAGCTGGCGGAGACACTATCGGACCCGCATTCGGTATCGACTTGGAGGGATTCGCTGAAAACAGCATTAAGTACGACCATCCTTATGAAATCAACATCACGAACTGCCGCTTCAAAAGAAATGGTAAAGGTGCCTTAAACATCAACGTTACAGGTAAAGTTCATGCTACTAATAACTTCTCCGATGACGTGTTCAGCTACGGGTTCTCGACAGATAGTACGATCAGCAATAACACGATCACTAACGAGACAGGGATAGACAAACCATACGGTATAGACTCCATCCGTAAGTCCTCCTCCGAAACTGGTAACCGTACAATCATCACAGGTAACCAGATTAGAGGATTTGCTACAGGTATTTGTGCCCGAGGTGTAGGTGTTATTGTCAGCCAAAACTATCTTGAGGATATTAGCTCCGTGGGGATCAACCCTTACCTTTCCGAAGATGTTATGGTAGCTAATAATACGATTAACAGTGACTGCCTGCATGTGTGGGTCCGTAACTCTGTGGATGTTCAGGTGGGCAACAACAAAGGTAAAGACGCTGAAAATTACTACGGAATCAAAGTAGAGGACTCCAGTGATGTAGTTGTCAATGATAACAAGCATGTAGCCAAAGGCGGTATTCAGGTTGCCCGGTCAACAAATGTACGTATCAAAGACAATGATTTAACTCTTATTGGTAATGGTAACGGTATTAGCTGGGACAAGACTTCACAAGTTAAGTTGATTAAATCCAACTGGATAAGTGGTGCTGTAGCAGCTGCTATTTCCGGCTACGCAGACGCTTACTCCACTATTATCTCCTATAACATCTTAGAAGACTGCAAGTACCTAATCGCTATCTACTTGAATGGCGGGGCACACCACATGCTTAAAGGTAATGACATCATGTTCAGAAGAGGAGCTAACGGAGGATACGGAGTTCAGTTAGTAAACACCACACAAGCTAGATTAATCAGCAATGATGTCCGTACAATGGACGGCTGCACTCTGCATGCTTCTTACGACTCCACAGGATCAACATATACAAAGTATGCGTATAACACTTACATCGGAAAGATCAACCTTGGTCAAGCAGACACTGAAAACTACAACACAAAATTAGACTAA

	Description	Category	Evidence (source)
GO:0044423	virion component	Cellular Component	IEA:UniProtKB-KW (UniProt)
GO:0051701	biological process involved in interaction with host	Biological Process	IEA:UniProtKB-ARBA (UniProt)
GO:0019058	viral life cycle	Biological Process	IEA:UniProtKB-ARBA (UniProt)

Title	Authors	Date	PMID	Source
	—	—	24309726	PubMed

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Gene Ontology

Tertiary structure

Predicted Aligned Error (PAE)

Literature