Protein

View in Explore
Genbank accession
XQU50106.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAYQGINTGSVPNDGTGDTLQAGAVKINANFTEVYDTLGDSGVIGNAELSQVSCTGIITASSFVGNLNANSLNQGTIPNGRFPATIPGDLSGNAATATQFFDSVLVGGVPFNGGSSINLPGVNTEGDQDTTGNAATATQLATSVNIGGVSFDGSASINLPGVNQAGDQDTTGNAATATVATRVSDTAAPASASDTGTAGEVRYDSSFIYVCVATDTWVRAALSTWS
Physico‐chemical
properties
protein length:226 AA
molecular weight: 22487,02880 Da
isoelectric point:4,05003
aromaticity:0,06195
hydropathy:-0,01062

Domains

Domains [InterPro]
DC_0574
RBD
2–226
DC_0574
IPR008987
ATT
4–42
IPR008987
IPR036240
STR
4–41
IPR036240
G3DSA:1.20.5.960
Unmapped
13–43
G3DSA:1.20.5.960
XQU50106.1
1 226
Architecture
ATT
RBD
ATT 2-42 | RBD 43-226
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SCSM2R
[NCBI] 		3400247 Viruses >
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQU50106.1 [NCBI]
Genbank nucleotide accession
PQ898602.1 [NCBI]
CDS location
range 164192 -> 164872
strand +
CDS
ATGGCATACCAAGGTATTAATACTGGATCGGTTCCTAATGATGGAACTGGTGACACTCTTCAGGCGGGTGCAGTAAAAATAAATGCAAACTTCACTGAAGTTTATGACACCCTTGGTGATTCGGGTGTCATTGGAAACGCAGAACTGAGTCAAGTTTCATGCACTGGAATTATTACTGCATCTAGTTTTGTAGGAAACTTAAACGCAAATAGTTTAAACCAAGGAACTATTCCTAATGGTAGATTCCCTGCAACAATTCCTGGTGACTTGAGTGGTAACGCTGCAACTGCAACTCAGTTCTTCGACTCAGTTCTTGTTGGTGGTGTTCCCTTTAATGGTGGTTCTAGTATTAACCTCCCTGGTGTAAACACAGAGGGTGATCAAGACACTACTGGTAACGCAGCTACTGCAACTCAGTTAGCAACCTCGGTTAATATTGGTGGAGTTTCTTTTGATGGTAGTGCATCAATTAATCTTCCTGGTGTAAACCAAGCAGGTGATCAAGACACTACTGGTAACGCTGCAACTGCAACAGTTGCAACCAGGGTAAGTGATACTGCAGCCCCTGCTAGTGCTTCAGATACTGGTACTGCAGGAGAAGTTCGTTACGATTCGAGTTTCATTTATGTTTGTGTTGCAACAGACACCTGGGTTCGCGCTGCACTTAGTACTTGGTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b0a5f5c7c9058510b8b263990bed1093f3122eaff9f0c1e55868f6156af18304
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7083
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Unveiling a novel broad-host-range cyanophage cross-infecting Prochlorococcus and Synechococcus hosts Wei,S., Cai,L., Zhang,R., Xu,Y. and Li,J. 2025-12-09 — GenBank