Protein

View in Explore
Genbank accession
AUS02994.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNTAYGVHRDGSGNLQNLQTFLNQSVVPQLPMKKPGDYGAIPGTSVNNTTAIRALLNDLSNGDVVDFGGNVYRVYADVDGIPSTGAGDTDSLSQNEVLWLDSKKNIKFQNGGLYNADQSVSPVKMYYPTILSLTNCENIHFDNFVLESKGENWGDSDASRTLTQDRRLSFLATNGGHALYAGLCNHIYINNCQFRLAGSVSPLYISMCANVHISDSFSNPASLGYASIGIDGWVGSVSDIPNNATTASTYLSNFVGHKETLVRREDGVPVGSSQYSAKGWVNTEDSVEVFVTGGQCSDMYGNATARTLGYAFGIGSGSRCTATAFEAHNVACLLHLFWSIDDLAYANLSNFYCESGLYGVVTDSVAFGDGDVILSNGVVNIDGSRVWDDGGESEESSHFICRRDSTNTVNFTLNNIEVNKGGYNLSHPFSLVWANDPDKYQRGKLVFNGGHYEPSGYISRVQAWGGSEQGEKDGLIMKNGCVIRDRNAIASDTPIYWGNQYTSGALYNYVDLDDALLQTHPSQFRNLANGSPDNANLVDGYWMPHSGLENCYTKDSKYHKRFLSTDLEFDSSQGLSGTDSRMRFKLRDNRYPHTTGGNENVFIGDDTGSIQVGEILTDSVSGSSLFVDFTLAGDVRVNFTPGVNYRLL
Physico‐chemical
properties
protein length:648 AA
molecular weight: 70518,79160 Da
isoelectric point:4,84322
aromaticity:0,10494
hydropathy:-0,34074

Domains

Domains [InterPro]
IPR011050
STR
30–231
IPR011050
IPR012334
STR
36–428
IPR012334
IPR011050
STR
37–231
IPR011050
AUS02994.1
1 648
Architecture
STR
STR 30-428 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUS02994.1
1 648
Domain Start End Length (AA) Confidence
N-terminal 1 45 45 0,9339
Central domain 46 511 467 0,9817
C-terminal 512 648 136 0,9269
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-45
Central
46-511
C-terminal
512-648

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 2.275.O._10N.286.54.E11
[NCBI] 		1881285 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS02994.1 [NCBI]
Genbank nucleotide accession
MG592671.1 [NCBI]
CDS location
range 259790 -> 261736
strand -
CDS
ATGAATACAGCCTATGGTGTGCATAGGGATGGCTCTGGCAATCTACAGAACCTACAGACTTTTTTAAATCAATCAGTAGTCCCGCAACTCCCTATGAAAAAACCAGGAGATTACGGGGCTATCCCAGGAACATCCGTTAATAACACTACCGCTATTCGTGCGCTATTAAACGACCTCTCTAACGGAGATGTAGTAGATTTTGGCGGCAATGTCTATAGAGTATATGCTGATGTAGATGGTATCCCATCTACAGGTGCAGGCGATACAGACTCCCTTTCGCAGAATGAAGTGCTGTGGTTAGATAGTAAGAAGAATATCAAATTCCAAAACGGAGGATTGTACAATGCAGATCAAAGTGTTTCACCTGTCAAAATGTACTACCCTACCATATTAAGCTTAACTAACTGTGAGAACATCCACTTTGATAATTTTGTATTAGAGAGTAAGGGTGAGAACTGGGGAGACTCAGACGCGTCTCGAACATTAACACAGGATCGTAGGCTGTCCTTCCTAGCTACTAACGGAGGACATGCATTATACGCTGGGCTGTGCAACCATATCTATATCAACAACTGTCAATTCCGATTAGCAGGGTCAGTCAGCCCACTGTACATCTCAATGTGTGCTAATGTACATATCTCAGATAGTTTCTCCAACCCCGCATCTCTGGGTTATGCGTCAATAGGTATAGATGGTTGGGTGGGTTCTGTTTCCGACATTCCTAATAATGCAACAACAGCTTCTACATATCTATCCAACTTTGTAGGACACAAAGAAACCCTTGTTCGCAGAGAAGATGGAGTACCTGTGGGTTCGTCGCAGTATTCTGCAAAAGGTTGGGTCAATACAGAAGATTCTGTTGAAGTGTTTGTGACTGGGGGCCAATGTTCAGATATGTATGGGAACGCGACAGCTAGAACACTAGGTTATGCTTTCGGTATAGGATCTGGTTCAAGGTGCACCGCCACTGCGTTTGAAGCGCATAATGTTGCATGTCTGCTGCACTTGTTCTGGTCTATAGACGATCTAGCCTATGCGAACCTATCTAACTTCTACTGTGAATCCGGCTTGTATGGGGTTGTCACAGACAGTGTCGCCTTTGGGGATGGCGATGTGATCCTATCGAACGGGGTTGTTAATATAGACGGATCTCGTGTTTGGGATGACGGTGGTGAAAGTGAAGAGAGTAGTCATTTTATTTGCAGAAGAGATTCAACTAATACCGTAAACTTCACATTGAATAACATCGAAGTCAACAAAGGCGGCTATAACCTCAGCCACCCGTTTTCATTAGTATGGGCTAACGATCCTGATAAGTACCAAAGAGGAAAGCTCGTGTTTAACGGAGGGCACTACGAACCTTCTGGGTACATTTCACGAGTTCAAGCATGGGGCGGTAGTGAGCAGGGTGAGAAAGACGGGCTGATTATGAAAAACGGTTGTGTGATTAGGGATAGAAACGCTATCGCAAGCGACACGCCTATTTACTGGGGCAACCAATACACATCTGGTGCTTTATACAACTATGTTGATCTAGACGACGCATTACTCCAAACACACCCTTCTCAATTCAGAAATCTGGCAAACGGCAGCCCGGATAACGCCAACCTTGTTGATGGATATTGGATGCCGCATAGTGGCTTAGAAAACTGTTATACTAAAGATTCTAAGTACCACAAGAGATTCTTAAGCACAGACTTAGAGTTCGACTCATCTCAAGGACTTTCAGGAACTGATTCTCGTATGCGATTTAAACTGCGTGACAATAGATACCCACACACTACAGGTGGTAACGAGAATGTGTTCATTGGAGATGACACAGGAAGCATACAGGTTGGTGAAATACTCACTGATAGTGTTTCAGGATCATCTCTTTTTGTCGACTTTACATTGGCGGGGGATGTACGGGTTAACTTCACACCAGGCGTAAACTACCGTCTCCTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
187a158e9222f204ea03123db45bad2a35a1d96231485aa2e7584697051d9513
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6128
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank