Protein

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Genbank accession
AUS02994.1 [GenBank]
Protein name
pectin lyase fold/virulence factor
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MNTAYGVHRDGSGNLQNLQTFLNQSVVPQLPMKKPGDYGAIPGTSVNNTTAIRALLNDLSNGDVVDFGGNVYRVYADVDGIPSTGAGDTDSLSQNEVLWLDSKKNIKFQNGGLYNADQSVSPVKMYYPTILSLTNCENIHFDNFVLESKGENWGDSDASRTLTQDRRLSFLATNGGHALYAGLCNHIYINNCQFRLAGSVSPLYISMCANVHISDSFSNPASLGYASIGIDGWVGSVSDIPNNATTASTYLSNFVGHKETLVRREDGVPVGSSQYSAKGWVNTEDSVEVFVTGGQCSDMYGNATARTLGYAFGIGSGSRCTATAFEAHNVACLLHLFWSIDDLAYANLSNFYCESGLYGVVTDSVAFGDGDVILSNGVVNIDGSRVWDDGGESEESSHFICRRDSTNTVNFTLNNIEVNKGGYNLSHPFSLVWANDPDKYQRGKLVFNGGHYEPSGYISRVQAWGGSEQGEKDGLIMKNGCVIRDRNAIASDTPIYWGNQYTSGALYNYVDLDDALLQTHPSQFRNLANGSPDNANLVDGYWMPHSGLENCYTKDSKYHKRFLSTDLEFDSSQGLSGTDSRMRFKLRDNRYPHTTGGNENVFIGDDTGSIQVGEILTDSVSGSSLFVDFTLAGDVRVNFTPGVNYRLL
Physico‐chemical
properties
protein length:648 AA
molecular weight: 70518,79160 Da
isoelectric point:4,84322
aromaticity:0,10494
hydropathy:-0,34074

Domains

Domains [InterPro]
IPR012334
36–428
IPR012334
IPR011050
37–231
IPR011050
AUS02994.1
1 648
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 2.275.O._10N.286.54.E11
[NCBI] 		1881285 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS02994.1 [NCBI]
Genbank nucleotide accession
MG592671 [NCBI]
CDS location
range 259790 -> 261736
strand -
CDS
ATGAATACAGCCTATGGTGTGCATAGGGATGGCTCTGGCAATCTACAGAACCTACAGACTTTTTTAAATCAATCAGTAGTCCCGCAACTCCCTATGAAAAAACCAGGAGATTACGGGGCTATCCCAGGAACATCCGTTAATAACACTACCGCTATTCGTGCGCTATTAAACGACCTCTCTAACGGAGATGTAGTAGATTTTGGCGGCAATGTCTATAGAGTATATGCTGATGTAGATGGTATCCCATCTACAGGTGCAGGCGATACAGACTCCCTTTCGCAGAATGAAGTGCTGTGGTTAGATAGTAAGAAGAATATCAAATTCCAAAACGGAGGATTGTACAATGCAGATCAAAGTGTTTCACCTGTCAAAATGTACTACCCTACCATATTAAGCTTAACTAACTGTGAGAACATCCACTTTGATAATTTTGTATTAGAGAGTAAGGGTGAGAACTGGGGAGACTCAGACGCGTCTCGAACATTAACACAGGATCGTAGGCTGTCCTTCCTAGCTACTAACGGAGGACATGCATTATACGCTGGGCTGTGCAACCATATCTATATCAACAACTGTCAATTCCGATTAGCAGGGTCAGTCAGCCCACTGTACATCTCAATGTGTGCTAATGTACATATCTCAGATAGTTTCTCCAACCCCGCATCTCTGGGTTATGCGTCAATAGGTATAGATGGTTGGGTGGGTTCTGTTTCCGACATTCCTAATAATGCAACAACAGCTTCTACATATCTATCCAACTTTGTAGGACACAAAGAAACCCTTGTTCGCAGAGAAGATGGAGTACCTGTGGGTTCGTCGCAGTATTCTGCAAAAGGTTGGGTCAATACAGAAGATTCTGTTGAAGTGTTTGTGACTGGGGGCCAATGTTCAGATATGTATGGGAACGCGACAGCTAGAACACTAGGTTATGCTTTCGGTATAGGATCTGGTTCAAGGTGCACCGCCACTGCGTTTGAAGCGCATAATGTTGCATGTCTGCTGCACTTGTTCTGGTCTATAGACGATCTAGCCTATGCGAACCTATCTAACTTCTACTGTGAATCCGGCTTGTATGGGGTTGTCACAGACAGTGTCGCCTTTGGGGATGGCGATGTGATCCTATCGAACGGGGTTGTTAATATAGACGGATCTCGTGTTTGGGATGACGGTGGTGAAAGTGAAGAGAGTAGTCATTTTATTTGCAGAAGAGATTCAACTAATACCGTAAACTTCACATTGAATAACATCGAAGTCAACAAAGGCGGCTATAACCTCAGCCACCCGTTTTCATTAGTATGGGCTAACGATCCTGATAAGTACCAAAGAGGAAAGCTCGTGTTTAACGGAGGGCACTACGAACCTTCTGGGTACATTTCACGAGTTCAAGCATGGGGCGGTAGTGAGCAGGGTGAGAAAGACGGGCTGATTATGAAAAACGGTTGTGTGATTAGGGATAGAAACGCTATCGCAAGCGACACGCCTATTTACTGGGGCAACCAATACACATCTGGTGCTTTATACAACTATGTTGATCTAGACGACGCATTACTCCAAACACACCCTTCTCAATTCAGAAATCTGGCAAACGGCAGCCCGGATAACGCCAACCTTGTTGATGGATATTGGATGCCGCATAGTGGCTTAGAAAACTGTTATACTAAAGATTCTAAGTACCACAAGAGATTCTTAAGCACAGACTTAGAGTTCGACTCATCTCAAGGACTTTCAGGAACTGATTCTCGTATGCGATTTAAACTGCGTGACAATAGATACCCACACACTACAGGTGGTAACGAGAATGTGTTCATTGGAGATGACACAGGAAGCATACAGGTTGGTGAAATACTCACTGATAGTGTTTCAGGATCATCTCTTTTTGTCGACTTTACATTGGCGGGGGATGTACGGGTTAACTTCACACCAGGCGTAAACTACCGTCTCCTGTAA

Tertiary structure

PDB ID
187a158e9222f204ea03123db45bad2a35a1d96231485aa2e7584697051d9513
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6128
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank