Protein

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Genbank accession
QDH45336.1 [GenBank]
Protein name
tail family protein
RBP type
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MQSFVKIIDGYKEEVITDFNQLIFLDARAESPNTNDNSVTINGVDGILPGAISFAPFSLVLRFGYDGIDVIDLNLFEHWFRSVFNRRHPYYVITSQMPGVKYAVNTANVTSNLKDGSSTEIEVSLNVYKGYSESVNWTDSEFLFDSNWMFENGIPLDFTPKYTHTSNQFTIWNGSTDTINPRFKHDLKILINLNASGGFELVNYTTGDIFKYNKSIDKNTDFVLDSVYAYRDINRVGIDTNRGIITLAPGKNEFKIKGDVSDIKTTFKFPFIYR
Physico‐chemical
properties
protein length:274 AA
molecular weight: 31219,63760 Da
isoelectric point:5,14304
aromaticity:0,14234
hydropathy:-0,26277

Domains

Domains [InterPro]
IPR008841
STR
8–126
IPR008841 DC_0197
QDH45336.1
1 274
Architecture
STR
STR
STR 8-126 | STR 133-274
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDH45336.1
1 274
Domain Start End Length (AA) Confidence
N-terminal 1 192 192 0,9500
Central domain 193 263 72 0,1217
C-terminal 264 274 10 0,2705
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-192
Central
193-263
C-terminal
264-274

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage SAP8
[NCBI] 		2975007 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH45336.1 [NCBI]
Genbank nucleotide accession
MK801680 [NCBI]
CDS location
range 14749 -> 15573
strand +
CDS
ATGCAATCTTTTGTAAAAATCATAGATGGTTACAAGGAAGAAGTAATAACAGATTTTAATCAGCTTATATTTTTAGATGCAAGGGCTGAAAGTCCAAACACCAATGATAACAGTGTAACTATTAACGGAGTAGATGGTATTTTACCGGGCGCAATTAGTTTTGCGCCTTTTTCATTAGTATTAAGGTTTGGCTATGATGGTATAGATGTTATAGATTTAAATTTATTTGAGCATTGGTTTAGATCTGTGTTTAATCGCAGACATCCTTATTATGTTATTACTTCTCAAATGCCTGGTGTTAAATATGCAGTGAATACAGCTAATGTTACATCTAATTTAAAAGATGGTTCTTCAACTGAAATTGAAGTAAGTTTAAATGTTTATAAAGGGTATTCTGAATCAGTTAATTGGACCGATAGCGAGTTCTTATTCGACTCTAATTGGATGTTTGAAAATGGAATTCCTCTTGATTTCACACCTAAATATACTCATACATCAAATCAATTTACTATTTGGAACGGTTCTACTGATACGATAAATCCACGATTCAAGCACGATTTGAAAATATTAATTAATTTAAATGCGAGTGGAGGATTTGAACTGGTTAACTATACAACAGGTGATATTTTTAAGTACAACAAAAGTATAGATAAAAACACTGATTTTGTTTTAGATAGTGTGTATGCATATCGAGATATAAATAGAGTGGGAATTGATACAAATAGAGGCATTATAACATTAGCGCCAGGTAAAAATGAATTTAAGATTAAAGGAGACGTCAGTGATATTAAAACTACATTTAAGTTTCCTTTTATTTATAGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
6554d45710fdb7deb7789c005ed7d73b4cf4f01164defb75c7ecb8a136dd418e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9247
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriphages infecting S. aurues Yu,J.-H., Park,J.-H., Chang,H.-J. and Lim,J.-A. 2017-07-27 — GenBank