Protein

View in Explore
Genbank accession
YP_009615405.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MEDLQMALYRQGEASMTAEGQVTGVGTQWREPLSLIRKGATIVFLTTPLKLAVINTIDSDTEMTAITTDGEAVAQSKYVILLNDSLTVDGMAQDVAETLRYYQSKETEIEEAIEFFKNFDLKTLQDLVARAEAAAQSTSADRAATEQLKNETNQFRAGALNARNEAEDARDAADIARSGAETAKSGADTAKAGAETARDEARQWAQQVQPENLLHKDQNLNDLANKDLARNNLGIGETDIPVFRGISLTEKNSANSGILYLINKSPEDVQLSYSRIYNEIQGGLAKSTIQVTREGGDTNYYQFDESGNALNYNSITIGRGIGNALGSNSLVIGDTDTGLKWGSDGVLQVYCNGMNVAAYEAQNMHLNGLLNIWPVDNNASGIRVSGSRFGGSNALIGGQVAPGSFEVWRERACGMLVELPVDDAAVNVFKVVRWGGDWAAGLDVARYSAGGCEAHFNVRGAVYGFNDSGYASAVQWVNTSDIRLKANLKEIESAKEKVKSIKGYTYFKRNNLDEDEYSFYSEEAGVIAQDVQTVLPEAVYKISDSEYLGVSYGGVTALLVNAINEMIDDSDKQNKTIQAQQEEIKELKNEIAEMKAAIAEMQALIVQTAK
Physico‐chemical
properties
protein length:610 AA
molecular weight: 66282,86250 Da
isoelectric point:4,61006
aromaticity:0,07213
hydropathy:-0,35705

Domains

View on InterPro
Domain architecture
YP_009615405.1
1 610 aa
CHP 480–584 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Escherichia phage SRT8 [NCBI] · taxon 2496545
Uroviricota Caudoviricetes Drexlerviridae Sertoctavirus Sertoctavirus SRT8
Host
Escherichia coli BL21 [NCBI] · taxon 511693
Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli

Coding sequence (CDS)

Genbank protein accession
YP_009615405.1 [NCBI]
Genbank nucleotide accession
NC_042043.1 [NCBI]
CDS location
range 1467 -> 3299
strand +
CDS
TTGGAGGATTTACAAATGGCTTTATACAGACAAGGCGAAGCGTCAATGACGGCAGAAGGACAAGTAACGGGCGTCGGTACTCAATGGCGCGAACCGTTATCCCTGATCCGCAAAGGCGCAACTATAGTTTTCCTTACTACCCCATTGAAGCTGGCGGTAATCAACACGATCGATAGCGATACGGAAATGACCGCCATTACGACGGACGGCGAAGCGGTGGCGCAATCCAAATATGTGATCCTGTTGAATGACTCGTTAACCGTTGACGGCATGGCGCAAGACGTAGCCGAAACGCTTCGTTACTACCAGAGCAAAGAAACGGAAATAGAGGAAGCAATTGAATTCTTCAAAAACTTTGACCTTAAAACATTACAGGATCTTGTTGCTCGCGCGGAAGCCGCCGCTCAATCGACAAGTGCGGATCGTGCTGCCACTGAGCAATTGAAGAATGAAACCAATCAGTTCAGGGCTGGGGCGTTAAATGCTCGTAATGAAGCGGAGGACGCTCGCGACGCCGCTGATATTGCAAGATCTGGCGCTGAGACTGCAAAGTCTGGCGCTGATACAGCAAAGGCTGGCGCTGAAACTGCGCGTGATGAAGCTCGCCAATGGGCGCAACAGGTACAGCCTGAAAATCTGCTGCATAAAGATCAAAACCTTAATGATCTTGCAAACAAAGACCTTGCAAGGAATAATTTGGGCATTGGTGAAACTGACATTCCTGTTTTTAGAGGAATAAGCCTAACAGAAAAAAACTCTGCAAACTCTGGAATTCTTTATTTAATAAACAAAAGTCCAGAAGATGTACAGCTTTCATACTCAAGAATTTACAACGAAATTCAAGGTGGATTAGCAAAATCAACAATACAAGTTACTAGGGAAGGTGGCGACACAAACTATTATCAGTTTGATGAAAGCGGTAACGCGCTGAATTACAACTCAATAACAATCGGTAGGGGTATTGGTAATGCTCTTGGCAGTAATTCTCTTGTTATTGGCGATACTGACACAGGTTTGAAATGGGGCAGTGATGGTGTTTTGCAAGTTTATTGCAATGGTATGAATGTTGCAGCTTATGAAGCGCAAAATATGCACCTTAACGGACTTTTAAATATATGGCCTGTTGATAATAACGCTAGCGGCATTAGAGTTTCAGGATCTAGATTTGGGGGCAGCAATGCGTTAATCGGTGGTCAAGTAGCCCCTGGAAGTTTTGAAGTATGGCGAGAACGCGCTTGTGGTATGCTTGTTGAATTACCTGTTGATGATGCGGCAGTAAACGTCTTTAAGGTTGTTCGATGGGGTGGAGATTGGGCTGCTGGTCTTGATGTTGCCAGATATAGCGCTGGAGGTTGCGAAGCTCATTTTAATGTAAGGGGCGCTGTTTATGGGTTTAACGATTCTGGTTATGCGTCTGCTGTGCAATGGGTTAACACTTCCGATATTCGCCTGAAAGCAAACCTAAAAGAGATTGAAAGCGCTAAAGAAAAAGTGAAATCAATAAAAGGTTACACTTATTTTAAGCGCAACAATCTTGATGAAGATGAATATTCTTTCTATTCGGAGGAGGCTGGTGTAATAGCTCAAGACGTGCAAACTGTTTTACCGGAAGCGGTTTACAAGATTTCAGATTCAGAATATTTAGGTGTTAGCTATGGCGGTGTTACTGCTCTTTTGGTTAACGCGATCAATGAAATGATTGATGATTCAGATAAGCAGAATAAAACTATTCAGGCTCAACAGGAGGAAATTAAAGAGTTGAAAAACGAGATCGCAGAAATGAAAGCCGCAATTGCGGAAATGCAAGCGCTTATTGTCCAAACTGCTAAGTAA

Genome Context

Tertiary structure

YP_009615405.1
ESMFold structure
Source ESMFold
pLDDT 71.9
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of the novel Escherichia coli phage SRT8 Fan,X., Zhao,K., Song,S. and Zhao,Z. 2018-03-02 — GenBank