Protein

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Genbank accession
WEU69948.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MLINVLNLNDSQDGNRIKQGDLSHMRYILSDTNNDDLKLDGLPAKVFLTDSTGVKYIYDTTVRQSDNAYVCDVVINQIIPANTYSLEIWVDNKYVFPSDNKAKIQVTESVIGRQLINTQNHDLWQEMIEYSVKNGLIKNQTESEENFVIGENAPTDTTKIWIDTTGGNE
Physico‐chemical
properties
protein length:169 AA
molecular weight: 19162,10110 Da
isoelectric point:4,50031
aromaticity:0,07692
hydropathy:-0,49349

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SepS_BE20
[NCBI] 		3028896 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus epidermidis
[NCBI] 		1282 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WEU69948.1 [NCBI]
Genbank nucleotide accession
OQ355699.1 [NCBI]
CDS location
range 16129 -> 16638
strand +
CDS
ATGTTAATAAATGTACTTAATTTAAATGACTCACAAGACGGCAATCGTATTAAACAAGGTGACTTATCACACATGCGATACATCTTATCTGACACTAACAACGACGACTTAAAACTAGACGGATTACCTGCAAAAGTTTTTCTCACTGATAGTACAGGTGTCAAATATATCTACGACACTACAGTTAGGCAATCTGACAATGCCTATGTGTGCGATGTTGTAATCAATCAGATTATCCCTGCAAACACGTATTCATTAGAAATATGGGTTGATAACAAGTATGTATTCCCGTCCGACAATAAAGCAAAAATTCAAGTGACAGAGAGTGTGATTGGTAGACAATTGATCAATACACAAAACCATGACTTATGGCAAGAGATGATTGAATACAGTGTAAAAAATGGATTGATTAAGAATCAAACTGAAAGCGAAGAAAATTTTGTCATTGGAGAAAACGCACCGACTGACACAACTAAAATTTGGATTGACACTACTGGAGGTAATGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
caf13efa10756ee4992df7e359e508cfc5f8bd2ea0ef48f2c6e856d421c3df86
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8181
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of bacteriophages targeting S. epidermidis from the skin of LVAD patients Pitton,M. 2021 — GenBank