Protein

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Genbank accession
USL90041.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MSTTGKTMVSAPLDVAGQYPSHDNSLGKGGVHIFSTMAERDKMWSSLKDMYTVALVGVGENNFPSWYKWENNKWNFAGYFGGMVLADTDGALTHVDSTAVFGPDFEIHDAGDTGQGILIQLSAAVKADIAKKIATKPSDFGMKVGPYLELKKEKDGTESLRIKPMSFELRKTPGYLAYLQYPELLYGKAKGTQPTRRGTIWADMVRVSPEGMLQVDRDGKAIGLQETDGLDPNVTGGSKFLVWPFIYLEGTAPADGYVELIWYEKSTGNIAVDMNGHPMAVRHNYKQGQVLTPPHDPLTFAQPQTAKGLTEYSLAIIDNFDEYIKVKDFASGPSGICIQELAKDGNTSLALTQAETDTGFSVRMESYYFGTYLASINYLTSITEPAIQVAAGTRAHTVAGIEIYAITDCEFAINQGSVQASPSNKSICDFYIGLELTPEVSRIAAGEQIKAALALMDKEEGWEIGFFNYQGDLSNRPPIYSARNNGTPILNTGWNKFGSDFISEDVVSGVHSHETPDITVPKNADYVMVALYPVQAQNPLDLTLKAFHLDATNPSLHFSVNGLAITGLQHLDFMTTTVKMEQGLGIVDAMTGEKTNTFAGLRYTFNDVAEGLPMPFGVATTKLKYLELDRSLNAVSGSQATGGEGALLANEHVELTLYQKFQLYNELASNHEVSIWLMKYTDSAGKAEEVTGSRTTFTVESKRPGLDYFQTNKVTVTLEPGDYIYVRGTTDVKDGAYTNTGLGKPLAITYITEKYLG
Physico‐chemical
properties
protein length:757 AA
molecular weight: 82668,25130 Da
isoelectric point:5,02777
aromaticity:0,10040
hydropathy:-0,23804

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
USL90041.1
1 757
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,9853
Central domain 313 511 200 0,2462
C-terminal 512 757 245 0,7546
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-511
C-terminal
512-757

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaS_ALK
[NCBI] 		2950473 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USL90041.1 [NCBI]
Genbank nucleotide accession
ON457558.1 [NCBI]
CDS location
range 41014 -> 43287
strand -
CDS
ATGAGTACGACTGGAAAAACAATGGTTAGCGCGCCACTTGACGTCGCGGGTCAATACCCTTCACATGATAACAGTTTAGGTAAGGGCGGAGTACATATCTTTAGCACCATGGCGGAGCGCGATAAAATGTGGTCATCGCTTAAAGATATGTACACAGTTGCGCTTGTTGGTGTTGGTGAAAACAATTTCCCTTCTTGGTACAAGTGGGAAAATAATAAGTGGAACTTTGCAGGATACTTCGGGGGTATGGTTCTGGCAGACACTGATGGTGCTCTCACTCACGTAGATAGTACTGCGGTGTTTGGGCCTGACTTTGAAATCCACGACGCAGGTGACACAGGGCAAGGTATTCTTATCCAGTTGAGCGCAGCAGTCAAAGCGGATATTGCTAAGAAGATTGCAACGAAGCCTTCAGACTTTGGTATGAAGGTAGGCCCATACCTAGAGTTGAAGAAAGAAAAAGATGGCACTGAGTCGTTACGTATCAAGCCGATGTCTTTCGAGCTTCGCAAAACTCCAGGCTACTTAGCTTACCTTCAATACCCTGAGCTTCTCTACGGTAAAGCTAAAGGAACCCAACCTACTCGACGCGGAACTATCTGGGCGGATATGGTTCGTGTTAGTCCTGAAGGTATGTTGCAAGTTGACCGAGACGGTAAAGCAATTGGTCTACAAGAAACTGATGGACTTGACCCTAATGTAACAGGTGGTTCTAAATTTTTGGTTTGGCCATTCATCTACCTTGAAGGTACAGCGCCAGCTGACGGATATGTAGAACTCATTTGGTATGAAAAATCTACGGGTAATATTGCAGTAGATATGAATGGCCATCCAATGGCTGTTCGTCATAACTACAAGCAAGGTCAGGTACTAACTCCGCCACATGACCCTTTAACTTTTGCCCAACCTCAGACCGCTAAGGGTTTAACAGAATACAGCCTAGCAATCATAGACAACTTTGATGAGTACATTAAGGTGAAGGACTTTGCTAGTGGGCCGTCTGGGATCTGCATTCAAGAACTGGCTAAAGACGGCAACACAAGTCTAGCTCTCACCCAAGCGGAAACAGATACTGGATTTAGTGTACGTATGGAGTCCTACTACTTTGGCACTTATTTAGCTAGTATCAACTATTTGACTTCCATAACTGAACCTGCTATTCAAGTTGCTGCTGGTACTCGTGCGCATACTGTTGCAGGTATAGAAATTTATGCAATCACTGATTGTGAGTTTGCAATAAATCAAGGTAGCGTACAGGCGTCACCGTCTAACAAAAGTATCTGTGATTTCTATATTGGGTTAGAACTAACACCTGAAGTATCCCGCATCGCAGCAGGTGAACAAATTAAAGCAGCTTTAGCTTTAATGGATAAGGAGGAAGGTTGGGAAATAGGTTTCTTTAACTACCAAGGAGACTTATCAAATCGCCCTCCAATTTACTCAGCGCGCAACAATGGGACGCCTATCTTAAATACAGGTTGGAATAAGTTTGGCAGTGACTTTATTTCTGAAGATGTTGTTAGTGGGGTTCACTCTCACGAAACTCCTGACATCACAGTGCCTAAAAACGCTGACTATGTAATGGTAGCTCTTTACCCTGTACAAGCGCAGAACCCTCTGGACTTAACTCTTAAAGCTTTCCATTTGGATGCTACTAATCCAAGCTTACACTTTAGTGTTAATGGTTTAGCTATCACGGGTTTACAACACCTAGACTTCATGACCACTACTGTCAAGATGGAGCAAGGTCTTGGTATAGTTGATGCTATGACAGGCGAAAAGACTAATACCTTTGCAGGTCTACGATATACCTTTAATGATGTAGCCGAAGGGTTACCTATGCCTTTTGGTGTAGCAACTACTAAGCTAAAGTATTTGGAACTAGACCGTTCCCTTAATGCAGTATCTGGGAGTCAGGCAACTGGAGGTGAAGGTGCTCTCTTAGCAAATGAGCATGTAGAACTAACTCTATACCAGAAGTTCCAGCTCTATAATGAACTAGCTTCTAACCATGAAGTATCTATCTGGCTCATGAAGTACACAGACTCTGCTGGTAAAGCGGAAGAGGTAACGGGAAGCCGCACTACCTTTACAGTAGAGAGTAAGCGCCCAGGCCTTGATTACTTCCAGACAAACAAAGTGACTGTAACATTAGAGCCTGGTGATTACATCTACGTTCGTGGTACTACGGATGTGAAAGACGGCGCTTATACTAACACAGGTTTAGGCAAGCCTCTTGCTATCACCTACATCACTGAGAAGTATCTCGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ca67aaff7dc642d60c08b22762c8611872fd0c4f0313a77c1d009c71a5594b51
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4941
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50