Protein

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Genbank accession
YP_010050818.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,59
Protein sequence
MAIVVNGVDPDIYVGSTPVREVYVGSSRVWARGERLEDPLDNPNGWTLSQSSGGGIIIDGEARIAADGTGYAHNVTPAMTDDQYVACEVGGYTHGSRQSALFSHDDGNRGGHYMAVWTTGRVDFIRASGWASQTTAFASWTGSISSADWIEMWNVGARFRVAVRGTVVIDHVVSNPALGGRRQGIVLTRSAFASSSRMAAWRGGDRRRWGK
Physico‐chemical
properties
protein length:211 AA
molecular weight: 22735,95840 Da
isoelectric point:7,96850
aromaticity:0,09479
hydropathy:-0,27299

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_010050818.1
1 211 aa
Domain Start End Length (AA) Confidence
N-terminal 1 27 27 0,8966
Central domain 28 200 174 0,0164
C-terminal 201 211 10 0,9564
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Gordonia phage Catfish [NCBI] · taxon 2301538
Uroviricota Caudoviricetes Ruthgordonvirinae Catfishvirus catfish
Host No host information

Coding sequence (CDS)

Genbank protein accession
YP_010050818.1 [NCBI]
Genbank nucleotide accession
NC_054434 [NCBI]
CDS location
range 23773 -> 24408
strand +
CDS
ATGGCGATTGTGGTTAACGGCGTGGACCCTGACATTTACGTCGGGTCCACGCCCGTCCGCGAGGTCTACGTCGGGTCGTCCCGCGTGTGGGCGCGAGGCGAGCGGCTGGAAGATCCGCTAGACAATCCGAACGGCTGGACGTTGTCGCAGTCGTCCGGCGGCGGGATCATCATTGACGGCGAGGCGCGGATTGCGGCGGACGGGACCGGCTACGCCCACAACGTCACGCCCGCGATGACTGACGATCAGTATGTCGCGTGTGAGGTCGGCGGGTACACGCACGGCTCACGGCAGTCGGCACTGTTCTCCCACGACGACGGCAACCGTGGCGGGCACTACATGGCGGTGTGGACGACCGGGCGGGTCGATTTCATTCGCGCGTCTGGATGGGCCTCGCAGACAACAGCGTTCGCGTCATGGACGGGTTCGATCAGCTCGGCCGATTGGATCGAAATGTGGAACGTCGGTGCCCGGTTCCGGGTCGCCGTGCGGGGGACCGTGGTGATCGACCACGTGGTGAGTAACCCGGCGCTCGGTGGGCGTCGGCAAGGAATCGTCCTGACGCGGAGCGCGTTCGCGAGTTCGTCCCGTATGGCGGCGTGGCGCGGCGGCGACCGGCGTCGGTGGGGCAAGTGA

Genome Context

Tertiary structure

YP_010050818.1
ESMFold structure
Source ESMFold
pLDDT 82.7
Oligomeric state monomer
Download structure