Phage RBP Database

Genbank accession

YP_009603108.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,43

Protein sequence

MTYNQIPAVDENFNFPPEVKTALTESVEMTNAIIDIVSEDPVVAGAAAEAVDTAIEGLSLVQTKDASLLREIPSTEYALPFTDKDGYVAGGVQTDGRFNFEKYPKVKGQSDITLRPVSEFESLWAIPFVDKDGYVAGGIRPDGTAEFQKLKVSPENALNILNQAIGYSRSNRNRVACFGDSLTVGYFDGTSVGKIADSYPSKLAEKLGSKVEVFNLGTSGWTVDEISAKVGALPLPLTVTNNTIPTSGSVSVTTTATIGWGSSGTRTMAGSLLGIPGSLVRVASSPNTFNFTRTTAGNEVVVPPNTIFVPEYAGHDADTAVVMFGRNDVSNNVVGVENSIPLHILNGAKRLIKWLSRDIKQVLVMSVTTNTAEVIGTTGYNNVVATNALLAAEFGPKFFDLRRYLIDKAIYDLGITPTADDLSKMAGDTLPPSIMDGGATGSGDITHYSRATANLVGQKVFEYLTTRDWVTQ

Physico‐chemical properties

protein length:	472 AA
molecular weight:	50363,10000 Da
isoelectric point:	4,81684
aromaticity:	0,08051
hydropathy:	-0,05339

Domain architecture

YP_009603108.1

1 472 aa

STR 172–467 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

SSF52266
STR

SSF52266

IPR036514
STR

IPR036514

IPR001087
ENZ

IPR001087

YP_009603108.1

1472 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1040
STR

DC_1040

YP_009603108.1

1472 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
SSF52266	STR	SSF52266	172	414	Merged direct domain	SSF52266	Central	Low	Positional only	227 proteins / 227 hits
IPR036514	STR	IPR036514	173	467	Merged direct domain	SGNH hydrolase superfamily	Central	Low	Positional only	180 proteins / 180 hits
IPR001087	ENZ	DC_0001	175	379	InterPro cluster	GDSL lipase/esterase	C-terminal	High	Text match	480 proteins / 783 hits

Proteins with similar domain architecture

Phage

Arthrobacter phage Circum [NCBI] · taxon 1772295

Uroviricota Caudoviricetes Mudcatvirus

Host No host information

Genbank protein accession

YP_009603108.1 [NCBI]

Genbank nucleotide accession

NC_041948.1 [NCBI]

CDS location

range 14871 -> 16289
strand +

CDS

ATGACCTATAATCAAATTCCTGCAGTTGACGAAAACTTTAATTTTCCGCCCGAAGTAAAAACTGCACTAACGGAATCTGTTGAGATGACGAATGCGATTATTGATATTGTCTCAGAAGACCCTGTAGTTGCTGGCGCAGCAGCTGAAGCCGTCGATACTGCTATTGAAGGGTTGAGTCTAGTTCAAACCAAAGACGCATCGCTACTGCGGGAAATACCTTCAACTGAATATGCTCTACCCTTTACCGATAAAGATGGTTATGTAGCTGGTGGAGTTCAGACTGATGGGCGTTTTAACTTTGAGAAATATCCAAAGGTCAAAGGGCAATCCGATATTACGCTTAGGCCAGTAAGTGAATTTGAATCGCTATGGGCTATTCCATTTGTAGATAAAGATGGTTATGTAGCTGGTGGCATTAGGCCTGATGGAACAGCAGAGTTTCAAAAGCTTAAAGTTAGTCCTGAAAATGCACTAAATATACTAAACCAAGCCATAGGATATAGTCGATCAAATCGAAATCGAGTAGCTTGTTTTGGAGATTCACTAACCGTTGGATATTTCGATGGGACTAGCGTTGGTAAAATTGCAGACTCGTATCCCTCTAAGCTAGCTGAAAAGCTTGGTTCTAAAGTTGAGGTTTTTAACCTTGGAACTAGTGGGTGGACTGTTGACGAAATTTCGGCAAAAGTTGGAGCTCTACCACTCCCACTTACCGTAACAAATAATACTATTCCAACATCAGGTTCTGTATCGGTAACTACTACAGCTACAATTGGATGGGGATCTAGTGGTACTCGAACTATGGCTGGATCACTTCTTGGTATTCCAGGTTCTCTAGTTCGTGTAGCATCTTCTCCAAATACATTTAATTTTACTAGGACTACTGCAGGAAATGAAGTAGTAGTTCCGCCAAATACCATATTTGTTCCCGAATATGCAGGACATGATGCTGATACAGCAGTTGTTATGTTTGGCAGAAATGATGTCTCAAATAATGTCGTAGGGGTTGAGAACTCAATACCATTACATATTCTTAATGGAGCAAAACGACTCATTAAATGGTTATCTAGGGACATCAAACAAGTTCTAGTAATGTCGGTGACTACTAATACCGCAGAAGTCATTGGGACTACAGGTTATAATAATGTAGTTGCGACTAATGCACTGTTAGCTGCTGAATTTGGTCCTAAATTCTTTGATTTGCGACGATATCTAATCGATAAAGCTATCTATGATTTGGGGATTACACCAACAGCAGATGATCTAAGTAAAATGGCCGGAGACACTTTACCACCATCAATTATGGATGGCGGAGCAACTGGTTCTGGAGATATTACGCATTACTCGCGTGCTACAGCAAATCTTGTGGGGCAAAAAGTATTTGAATATTTGACAACTAGGGATTGGGTAACACAATGA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)