Phage RBP Database

Genbank accession

YP_002004007.1 [GenBank]

Protein name

receptor binding tail protein

RBP type

TF

Evidence RBPdetect

Probability 0,67

TF

Evidence RBPdetect2

Probability 0,83

Protein sequence

MTIKNFTFFSPNGTEFPVGANNDAKLYMLLSEKDYSQFSLRHWETPINTALNRIYKNTSLLVGGRYFELYNEAVALNSNATNFVHANIDISNATNPVTMSVETSDNSNQVDINTGVGVLKKCIEVVETNAMGVSAVTKPSGSSIIEKIYPVGAYYLSSQPTEPATLFGFGTWSRVKGRGLVGVDESDSALSSGGKQGGSTNPLSQHTITPSSGQFVVARGAGKWHWSSGGAPSNSYAMDTENGGVTVGDNTNHNNWQPFEAAYIWKRIN

Physico‐chemical properties

protein length:	269 AA
molecular weight:	29038,83360 Da
isoelectric point:	5,95379
aromaticity:	0,10037
hydropathy:	-0,34461

Domain architecture

YP_002004007.1

1 269 aa

STR 1–143 · ATT 144–268 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:2.60.520.10
STR

G3DSA:2.60.520.10 IPR053827

SSF141658
STR

SSF141658 IPR053827

IPR048780
RBD

IPR048780

SSF141658
STR

SSF141658

YP_002004007.1

1269 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:2.60.520.10	STR	G3DSA:2.60.520.10	1	139	Merged direct domain	G3DSA:2.60.520.10	Central	Low	Positional only	29 proteins / 29 hits
SSF141658	STR	SSF141658	2	139	Merged direct domain	SSF141658	Central	Low	Positional only	13 proteins / 13 hits
IPR048780	RBD	DC_0780	2	135	InterPro cluster	Receptor-binding protein, N-terminal shoulder domain	Central	High	Text match	33 proteins / 33 hits
SSF141658	STR	SSF141658	2	150	Merged direct domain	SSF141658	Central	Low	Positional only	13 proteins / 13 hits
IPR053827	ATT	DC_0313	144	268	InterPro cluster	Baseplate structural protein Gp10, C-terminal domain	C-terminal	Medium	Text match	489 proteins / 489 hits
IPR053827	ATT	DC_0313	150	268	InterPro cluster	Baseplate structural protein Gp10, C-terminal domain	C-terminal	Medium	Text match	489 proteins / 489 hits

Proteins with similar domain architecture

Phage

Lactococcus phage bIBB29 [NCBI] · taxon 2898538

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

YP_002004007.1 [NCBI]

Genbank nucleotide accession

NC_011046 [NCBI]

CDS location

range 14826 -> 15635
strand +

CDS

ATGACAATTAAAAACTTTACATTCTTTAGTCCAAATGGAACAGAGTTTCCAGTCGGTGCTAATAATGACGCAAAACTGTACATGTTACTTTCTGAAAAAGACTATTCGCAATTCTCACTAAGGCATTGGGAAACGCCTATAAATACAGCTCTCAATAGAATTTATAAAAACACAAGTTTATTAGTTGGTGGAAGATATTTTGAGCTTTACAATGAAGCAGTAGCTTTAAATTCAAATGCTACGAACTTTGTCCATGCAAATATAGACATTTCTAATGCTACAAATCCAGTGACGATGAGCGTAGAAACTTCTGATAACTCAAATCAAGTTGACATCAATACAGGTGTCGGAGTTCTTAAAAAGTGTATTGAAGTTGTTGAAACAAATGCAATGGGAGTAAGTGCAGTCACAAAACCGTCAGGAAGCAGTATTATAGAAAAAATTTATCCAGTTGGTGCATATTACCTTAGTTCGCAACCAACTGAACCAGCTACATTGTTTGGATTTGGGACTTGGTCAAGAGTTAAAGGTCGTGGGTTAGTTGGGGTTGATGAATCTGATTCAGCTTTATCTAGCGGCGGCAAACAAGGTGGTTCAACAAATCCGTTGTCACAACACACAATAACTCCTTCAAGTGGACAGTTTGTTGTCGCTCGTGGGGCAGGAAAGTGGCACTGGTCTTCTGGTGGAGCTCCAAGTAATTCTTATGCTATGGATACAGAAAACGGCGGAGTCACAGTTGGAGATAACACTAATCATAATAACTGGCAACCGTTTGAGGCGGCCTATATTTGGAAACGTATAAATTAG

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)