Phage RBP Database

Genbank accession

AGY48335.1 [GenBank]

Protein name

tail fiber protein

RBP type

TSP

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,96

Protein sequence

MAELKVYNVALDTINDIRNKIFSFNQNDVNVAKIIATLTQKGKPIILTGAKVRFAFLKKDGKRVYQNATITDPTKSIVEVLLDQQVLALPKRVKGEIEIYFDGTQQNLVTEPFEFNVDRSILSTESIESSDLFPIIQQLESKLNKENTFGIVDITDYNVVGNGIEEGMNIQTALNKISTDFKKAIVRFPYANGTYKSNIALTVPNNVQIEGIFQPVLDFSGAPSNVKALTVKGSRSKVSGIDLKGNGYSGTTSVGLDIYGDNHEFKSIDLRNFNMGIDIAHSNTYILSFDKIRFFDMGTCLYADLVARSTPEAPIKNSGERIEFTRSVFCNSQLAIRADFSALDIYISHSSIDYCNEFFSFGKGIFNFSQCHLENALDAPERGWRANVDYFLHTTEAATINFDNCLFDLFQMHRIVSANSTLGKVFYRNCRAYFRDVNGVDRNLHSEEPVYVNVGATSATIYSPYISPITWPSVIGASNTDKKQIPMNLTVSNNVTDCILTVNFPAAAERTWIRITH

Physico‐chemical properties

protein length:	517 AA
molecular weight:	57782,77540 Da
isoelectric point:	5,97516
aromaticity:	0,10445
hydropathy:	-0,14739

Domain architecture

AGY48335.1

1 517 aa

ATT 4–144 · STR 151–490 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:2.60.40.3350
ATT

G3DSA:2.60.40.3350 IPR011050

IPR018913
ATT

IPR018913

AGY48335.1

1517 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1249
STR

DC_1249 DC_1464

AGY48335.1

1517 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:2.60.40.3350	ATT	G3DSA:2.60.40.3350	4	124	Merged direct domain	G3DSA:2.60.40.3350	N-terminal	Low	Positional only	41 proteins / 41 hits
IPR018913	ATT	DC_0557	7	144	InterPro cluster	BppU, N-terminal	Central	Medium	Text match	333 proteins / 333 hits
IPR011050	STR	IPR011050	151	490	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

AGY48335.1

1 517 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	166	166	0,9918
Central domain	167	446	281	0,9902
C-terminal	447	517	70	0,9767

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Bacillus phage Slash [NCBI] · taxon 1406790

Uroviricota Caudoviricetes Slashvirus

Host

Bacillus megaterium [NCBI] · taxon 1404

cellular organisms Bacteria Bacillati Bacillota Bacilli Bacillales

No CDS data available.

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)